LOC120545317


Basic Information

Item Value
gene id LOC120545317
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34571819 ~ 34948439 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779566.1
agacagactgagagagGACGTGTGGACGAGAAGACTGAGAGCTCAGAGCTGCTGGACCTGCATCAACTAACAGTGTGATTTAAAGTCAGCTTCTTCATCTCTCTGAAGAGGAGATCTCAACACTTCAGGAGGACCAGGAGACCTTAAGATGTCTGCAAAACCAAGAACAGATAGCAAAGACCTCCCTCCTGATCTGTCTGAATTCATGGTCAAACTCAAAGAACATGCAGCTTCATTCATCAGAGAGTTTGACAGCAGTGAACACAGGATGACACAGATTGTTGGAGAGTTTAGGGAGATTGCTGATAAATTCCAAAAGAGGCAGGAGAGAACAGGTACAGTCAGAACAGCAGGAACTGTTGCTGGAGGAGTAGGAATAGGACTCCTGTTCCTTGCAGCTCCGCTCACTGGGGGGGCTAGtttagtagcagcagcagcaggagtagCTGcaacagcaggaggaggagctgtGCTTTATGgtgtaaatgaaacaaaaacaaggaaAGAGATCGAAagtgcaaagaaagaagaagagctgGGGAAAGACTTCATGATGATCGTTGAACGGATGAAGAAGGACCTGGAAGAAATAAAGAAGATGTGTGAGAAGTTGGAGCAAAGATCAGCTGAAGATCAGGCTGGAAACATTCTGACACACATGGAGGAGTTTCGGGGGATTCTGAGAGAAGTTTCTGGAGATAAAAGAGGAGAAATCCCCCATCTTTGTAGCAAGATGATTGAAGACTTTGAAAAGATGAAGAAAGAACTCAAAGCCTTCACAGAAAAATAAAGGAAGCAACATGCATTATTAACATCATTGACTTCAACCTGGATTGATATTATTATTCATATAATGTGGGTATTGCAAATCCTTTTATTTTTGGTTCCTTTAATAGTTCGGAAATGTTATCTTTTAAAATATGTGATCCAAAATTCAATCCAAATTGCTGTGTAATCATTTATTGCCACCTCCCTTATTCTAACACCTGTTTTCTTAATGAGTTTTCTGATTAACTATCCTTCCTTGTGCTTAAGTTTGATAGGGTCATTAAAGTTGGTGATTTTATAAAGATTGACAATCCTTCCAATCGATTCACTAttgactttttaaatgtatgtacagtaagtCTTTTAACCTTGTGCAGTATGTCTCTGGCCCATCACATAAGCATGGACACACCCTTAACCTATATCTAAAGGACTCTTTACAGTCGCTGCTCCCGACTTGTCGCAcgacaatgtaatgtaaaaatgacgtagatctcacTAGCACGCCAGGATTTTGAATGTGCGTCCATTTTTTTCAGCAGAGCGcaacaaacaggaaacagcaagCATGAACGAgttctctcttgtaaacttccTGGGTTAAGAGGAggtcttttatggtgaatgaaaggcctgatcccaccaagtagctcatccaatTGTTGTGCAGACATTCTGAAGTATTCAAAGTGCTTCTCTTCGTCTATCATCCTCATTTGTTTCACCAGGATATTGAACTCACCGTATTTATCTCAGCCGTTATTCAAAGGACGAACATCCCACCTTCTTCTTCGTCGTTTCTTTGCAAGCAGGCTCAAAAGCAGCTGTTCTTCCTCCTCCATTGACTCCAATATCATCTCAGCCACTGTTGACATTGTCGGGAATGGCGAGTATACCGCAATGTGATGACGAGAACAGAGTCTGTCTTTGTATCAGAGGATTCTGACACGAGTTTCTGAACTGGCAGGAAGGATTAAAGTAGTTTTGTCTGCAGCTGTAAAAGTGATGAGTTCTGTTCTGTTATTGCTCAATGTGAAATTCTTCAGAGTAACTGCGACCCCTGACGATTAGGAAAAGTTAGTAAACTCCATCATCCAGTCAGCTGATCTCTGTCAGGAGGTCGTTGTCAAGTTTGATCAGATGAAGGAAGAACTCAAAGACTTCAGTGTAAAGTAAAGATAGAAGCAGCAGGAGAAGAAAAAGGACTGGTTCACACTGAAACTGCTGACTACCTGTTAGtgtttaatcatttattttaccaaCTGGACTTTATGTAACTGAATCAGATGAACAATAATACTTTATGATATTTGATATGTTGGAATGTTGAATAATAAATCTCACTCACTGTTGGA
>XM_039779567.1
tgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctctgttcccTTTTCCCTGAAAGAAAGTTTATCTCAGCACATGATTTTGATTCAGGGCGTTTCCTTAAACAAGAATAAATAAATTCCTCCCAGCTTGTGTTGCAGTTATGTTCTTCGCTCTGTTGCAGGATTTAGATTTAGAGAACGTCTCCTCTCATGGTGGATATCTGTTTTATTTCACTTTCCTCCGTCTGGAGCTCCAGCTGAAGTGTGATTTAAAGTCAGCTTCTTCATCTCTCTGAAGAGGAGATCTCAACACTTCAGGAGGACCAGGAGACCTTAAGATGTCTGCAAAACCAAGAACAGATAGCAAAGACCTCCCTCCTGATCTGTCTGAATTCATGGTCAAACTCAAAGAACATGCAGCTTCATTCATCAGAGAGTTTGACAGCAGTGAACACAGGATGACACAGATTGTTGGAGAGTTTAGGGAGATTGCTGATAAATTCCAAAAGAGGCAGGAGAGAACAGGTACAGTCAGAACAGCAGGAACTGTTGCTGGAGGAGTAGGAATAGGACTCCTGTTCCTTGCAGCTCCGCTCACTGGGGGGGCTAGtttagtagcagcagcagcaggagtagCTGcaacagcaggaggaggagctgtGCTTTATGgtgtaaatgaaacaaaaacaaggaaAGAGATCGAAagtgcaaagaaagaagaagagctgGGGAAAGACTTCATGATGATCGTTGAACGGATGAAGAAGGACCTGGAAGAAATAAAGAAGATGTGTGAGAAGTTGGAGCAAAGATCAGCTGAAGATCAGGCTGGAAACATTCTGACACACATGGAGGAGTTTCGGGGGATTCTGAGAGAAGTTTCTGGAGATAAAAGAGGAGAAATCCCCCATCTTTGTAGCAAGATGATTGAAGACTTTGAAAAGATGAAGAAAGAACTCAAAGCCTTCACAGAAAAATAAAGGAAGCAACATGCATTATTAACATCATTGACTTCAACCTGGATTGATATTATTATTCATATAATGTGGGTATTGCAAATCCTTTTATTTTTGGTTCCTTTAATAGTTCGGAAATGTTATCTTTTAAAATATGTGATCCAAAATTCAATCCAAATTGCTGTGTAATCATTTATTGCCACCTCCCTTATTCTAACACCTGTTTTCTTAATGAGTTTTCTGATTAACTATCCTTCCTTGTGCTTAAGTTTGATAGGGTCATTAAAGTTGGTGATTTTATAAAGATTGACAATCCTTCCAATCGATTCACTAttgactttttaaatgtatgtacagtaagtCTTTTAACCTTGTGCAGTATGTCTCTGGCCCATCACATAAGCATGGACACACCCTTAACCTATATCTAAAGGACTCTTTACAGTCGCTGCTCCCGACTTGTCGCAcgacaatgtaatgtaaaaatgacgtagatctcacTAGCACGCCAGGATTTTGAATGTGCGTCCATTTTTTTCAGCAGAGCGcaacaaacaggaaacagcaagCATGAACGAgttctctcttgtaaacttccTGGGTTAAGAGGAggtcttttatggtgaatgaaaggcctgatcccaccaagtagctcatccaatTGTTGTGCAGACATTCTGAAGTATTCAAAGTGCTTCTCTTCGTCTATCATCCTCATTTGTTTCACCAGGATATTGAACTCACCGTATTTATCTCAGCCGTTATTCAAAGGACGAACATCCCACCTTCTTCTTCGTCGTTTCTTTGCAAGCAGGCTCAAAAGCAGCTGTTCTTCCTCCTCCATTGACTCCAATATCATCTCAGCCACTGTTGACATTGTCGGGAATGGCGAGTATACCGCAATGTGATGACGAGAACAGAGTCTGTCTTTGTATCAGAGGATTCTGACACGAGTTTCTGAACTGGCAGGAAGGATTAAAGTAGTTTTGTCTGCAGCTGTAAAAGTGATGAGTTCTGTTCTGTTATTGCTCAATGTGAAATTCTTCAGAGTAACTGCGACCCCTGACGATTAGGAAAAGTTAGTAAACTCCATCATCCAGTCAGCTGATCTCTGTCAGGAGGTCGTTGTCAAGTTTGATCAGATGAAGGAAGAACTCAAAGACTTCAGTGTAAAGTAAAGATAGAAGCAGCAGGAGAAGAAAAAGGACTGGTTCACACTGAAACTGCTGACTACCTGTTAGtgtttaatcatttattttaccaaCTGGACTTTATGTAACTGAATCAGATGAACAATAATACTTTATGATATTTGATATGTTGGAATGTTGAATAATAAATCTCACTCACTGTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779566.1 False 2123 mRNA 0.41 2 34944975 34948439
XM_039779567.1 True 2296 mRNA 0.41 2 34571819 34948439

Neighbor

gene id symbol gene type direction distance location
wdr36 wdr36 coding upstream 216463 34332321 ~ 34355356 (+)
LOC120545262 NA coding upstream 525195 33997411 ~ 34046624 (+)
LOC120545261 NA coding upstream 622568 33936243 ~ 33949251 (+)
LOC120545095 NA coding upstream 665657 33899181 ~ 33906162 (+)
LOC120545260 NA coding upstream 672762 33894650 ~ 33899057 (+)
LOC120545265 man2a1 coding downstream 38231 34986670 ~ 35023782 (+)
LOC120545273 NA coding downstream 186032 35134471 ~ 35143485 (+)
LOC120545272 NA coding downstream 256642 35205081 ~ 35232148 (+)
LOC120545274 NA coding downstream 311757 35260196 ~ 35608119 (+)
LOC120545309 NA coding downstream 331734 35280173 ~ 35331959 (+)
G180198 NA non-coding upstream 22897 34545326 ~ 34548922 (+)
G180197 NA non-coding upstream 27333 34542657 ~ 34544486 (+)
G180194 NA non-coding upstream 31044 34513746 ~ 34540775 (+)
G180174 NA non-coding upstream 98360 34471409 ~ 34473459 (+)
G180166 NA non-coding upstream 223035 34343293 ~ 34348784 (+)
G180271 NA non-coding downstream 9869 34958308 ~ 34958827 (+)
G180273 NA non-coding downstream 16598 34965037 ~ 34965484 (+)
G180274 NA non-coding downstream 17173 34965612 ~ 34968768 (+)
G180278 NA non-coding downstream 38711 34987150 ~ 34987669 (+)
G180280 NA non-coding downstream 42688 34991127 ~ 35022075 (+)
G180201 NA other upstream 5867 34564880 ~ 34565952 (+)
G180199 NA other upstream 11434 34557582 ~ 34560385 (+)
slc25a46 slc25a46,LOC102789456 other upstream 242556 34318593 ~ 34329263 (+)
slc31a1 slc31a1 other upstream 263025 34282844 ~ 34308794 (+)
G180043 NA other upstream 732432 33838192 ~ 33839387 (+)
G180268 NA other downstream 4625 34953064 ~ 34955966 (+)
LOC120545301 NA other downstream 407959 35356398 ~ 35891299 (+)
G180366 NA other downstream 902483 35850922 ~ 36042427 (+)
G180382 NA other downstream 1021327 35969766 ~ 35973061 (+)
LOC120545305 NA other downstream 1100167 36048606 ~ 36060523 (+)

Expression


Co-expression Network