LOC120560572 (fabp1)


Basic Information

Item Value
gene id LOC120560572
gene name fabp1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24909473 ~ 24910441 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803218.1
CGCTGGAGTTTGAGAGTATAAAACAGGCAGCTAAGCACTTCTCACTCACTACCTTCACTGTCTGCTGTCATGTCTTTCTCTGGAAAGTACCAGCTGGAGTCTCAGGAGAACTTTGAGCCTTTCATGAAGGCCATTGGTCTCTCTGATGAACTCATCCAGAAAGGCAAAGACATTAAGAGCATCTCTGAGATTGAGGAGAATGGTAACAACTTCAAAGTGACGGTCACCACCGGCTCAAAGGTCCTCGTGAATACCTTCACCATTGGACaggaggcagagctggagaCAGTCACTGGGGAGAAGGTCAAGGCCGTGGTTCAGCGTGATGGCAACAAGCTGAAGGTCTCCCTGAAGGGAATCGAGTCAGTCACAGAACTAGTGGACTCACTCACAATTGTCAATactATGACTGTTGGTGGCATTGTGTACAAGAGgacaagcaaacgcatttaaTGTCTGCACTTGGgataataaaatgtcaaaaaggca

Function

symbol description
fabp1 Enables antioxidant activity. Involved in cellular response to hydrogen peroxide; cellular response to hypoxia; and negative regulation of cysteine-type endopeptidase activity involved in apoptotic process. Located in cytosol and nucleoplasm. Biomarker of IgA glomerulonephritis and hypertension.

NR:

description
PREDICTED: fatty acid-binding protein, liver

GO: NA

KEGG:

id description
K08750 FABP1, L-FABP; fatty acid-binding protein 1, liver

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803218.1 True 489 mRNA 0.47 4 24909473 24910441

Neighbor

gene id symbol gene type direction distance location
ubox5 NA coding downstream 34547 24868508 ~ 24874926 (-)
LOC120560571 LOC100708704 coding downstream 41758 24866022 ~ 24867715 (-)
ccl27a NA coding downstream 46659 24860616 ~ 24862814 (-)
slc35d2 slc35d2 coding downstream 54032 24849006 ~ 24855441 (-)
LOC120560316 NA coding downstream 67287 24837661 ~ 24842186 (-)
oxt LOC101478568,LOC104967804,LOC104920809,LOC102782130 coding upstream 10319 24920760 ~ 24922810 (-)
LOC120561162 LOC101474940,LOC102208632,LOC102289757,LOC104920829,LOC103362721 coding upstream 117100 25027541 ~ 25034394 (-)
LOC120560055 LOC103362725 coding upstream 125621 25036062 ~ 25044892 (-)
rnf122 rnf122 coding upstream 137981 25048422 ~ 25065206 (-)
sh2b3 sh2b3,LOC104965654 coding upstream 236099 25146540 ~ 25208061 (-)
G64250 NA non-coding downstream 615517 24293653 ~ 24293956 (-)
G64249 NA non-coding downstream 615874 24293015 ~ 24293599 (-)
G64234 gadd45g,LOC102775619 non-coding downstream 694384 24213895 ~ 24215089 (-)
G64214 NA non-coding downstream 735797 24173462 ~ 24173676 (-)
G64209 NA non-coding downstream 754794 24151066 ~ 24154679 (-)
LOC120560057 NA non-coding upstream 134454 25044895 ~ 25047047 (-)
G64541 cdo1 non-coding upstream 659533 25569974 ~ 25625499 (-)
G64673 NA non-coding upstream 1014128 25924569 ~ 25924785 (-)
G64693 NA non-coding upstream 1041093 25951534 ~ 25952579 (-)
G64730 LOC104958878,LOC103357146,LOC107393839,LOC106513646,LOC107094516,LOC102798825 non-coding upstream 1268708 26179149 ~ 26180205 (-)
foxd5 LOC103358907,LOC104942959 other downstream 1522168 23384718 ~ 23387305 (-)
smim15 smim15,LOC106580593,LOC103398561 other downstream 1628345 23274919 ~ 23281128 (-)
G63882 LOC104956296,LOC101068944 other downstream 2076384 22830195 ~ 22833089 (-)
LOC120560435 idnk other downstream 3217923 21681976 ~ 21691550 (-)
rmi1 rmi1 other downstream 3282452 21616223 ~ 21627021 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other upstream 90882 25001323 ~ 25016921 (-)
LOC120560369 LOC104950284,LOC103362719 other upstream 156319 25066760 ~ 25080769 (-)
mapkapk5 mapkapk5 other upstream 179494 25089935 ~ 25105430 (-)
commd10 commd10,LOC102791033 other upstream 578041 25488482 ~ 25547852 (-)
mrps36 mrps36 other upstream 749110 25659551 ~ 25663405 (-)

Expression


Co-expression Network