XLOC_005230 (CR354395.2)


Basic Information

Item Value
gene id XLOC_005230
gene name CR354395.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 13553730 ~ 13556536 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010073
tgcctgtactgcggttaatcagggcacaggaaatccacctgcagcgtacgacctcagacaccagttcaatcggtgagtccttcccatgttcctgcacttttcagtgtactgattcctgtgattattaaatttgataaaagaatgattaatactacggctcttgtcgactctggatctgccggaaactttatatctaagaaatttgctttatgtcacgaactatctctcagctcatatgattcctgtcttgcagtggaagcactagacggtcgtcctgtgggtgagagacgcatccgtatgattacgaataagctacagttacaagttggtgttctacacattgaagaaatgcaattctacattattgattcagttaatcatccactggtgttgggactgccctggttaaggcgacatgatcctcatatctcctggagggacggacagatattgcagtggagtgagtcatgcatgaaacagtgcatccagcccattcacaaaattccattacgaaccaccaatgtgttacctgaactcgttgatgaactaatccccattgagtaccatgacttacatgaagcttttagcaaacaaaaagctactcaacttcccccacatcgaccaagtgattgtgctattgagttaattccaggttcaagtcctccaacgggtcgaatattccctctgtcacaacctgagcacaaggcaatgtctgaatatatcgacgaggaattggccaagggtttcatccgaccttctacatctcctgcttcagctggattcttctttgtaaagaagaaagatggcagtttacgtccctgtattgattaccgagggctcaatgaaatcaccgtaaaattccgctatccattacccctcgtacctcctgccctggaacagttaagaaaggctagatattataccaagcttgatcttcgcagtgcatataaccttgtcagaatccgtgctggtgacgagtggaagaccgcgttttccaccactagggggcactatgagtacacggtaatgcccttcggcctgtcaaactgtccatccgtgttccaatcttttatgaacgatgtctttcgggatatgctggatcgctgggtcatcatttacatcgacgacatcctcatatattcaaacacgatgaaggaacatgttgaacatgtacgtatggtgttgcaacgcatgattcaacatcgtctgtacgccaaattagagaagtgtgaatttcaccagacacagatcgcctttttgggatacgtcatcagtgcagaagggattaccatggatgatacgaaggtacaggcagttcaacgatggccgttaccccagaatctcaaggagttgcagcgatttctaggttttgccaacttctatagacggtttatcagaggctttagttcaatagccgcaccattaacagccatgaccaaacgaaattcccacaaactatcctggtcctctgaagcacgccaagcatttagcgatctgaagactcaattcaccacagctcctattctccgtcatcccaacccagacctacctttcattgtggaagtggatgcatccaacacaggagtcggtgctgtgttatctcaacgtcagggtcaaccatccaaaatgtatccatgtgccttcttctcccgtaaattgaccagcgcagaacgaaactatgatgtgggaaatcgcgaattactggcaatgaaattagccctggaagaatggagacactggctggagggggctagtcagcaattcaccatattaactgaccacaagaatctggaatatcttctctcagccaaacgtctaaatcccagacaagctcgttgggctttgttcttcaccagattcgacttcattgtcacctatagaccagggagtaaaaacagtaaggcagatgcactatccaggctatcagaggataaaaccccaattagtgatgaaaccattattcctacgaacttactagtggctccagtacagtgggacatacttaccgagatccaagaggccaaccgagaaaacaaccctccagtagactgtccgaatcacctgatttttgtacccaataacatacgtaccagattactgacccatattcatgacactcccagttcggggcatccaggcatcactgcaactttggagttagtcaaagcccgtttctggtggccgtccctcacgaaggatgtaattaattatgttcagaaatgtaaaatttgccaaagcacgaaggcatctcaccaaacccctgctggcctgttacaaccgctaccggttccgcaacggccctggtcccatatagcggtggacttcattacggatctccctgtttcccagaacaacacagtcattctcacggtggttgatcgtttctccaaggcttgtcgcctaataccgttgcccaaattgccctctgcctttgaaaccgcagaagccctgtgcaatcatgtatttcgaatgtttggcttacctgatgatatcgtctcagacaggggatcccaattcacttcccgggtatggtccgctctctgtaaaaatctaaatattaatgttagtctcacctcagggtaccatcctcaatccaacggccaaactgaacatatgaatcaagaagtcattcgatttctacgttcctactgtcatcagcaacagcacgactgcagtcgctatctgatgtgggcagaatatgcacaaaattcattaataaagccagccacgggtattacgccattcaaatgtattcttggctaccaaccacccctgtttccatggtccggagaacccactgagttacc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101547

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010073 True 2807 mRNA 0.46 1 13553730 13556536

Neighbor

gene id symbol gene type direction distance location
XLOC_005229 ghdc coding downstream 4192 13527422 ~ 13549538 (-)
XLOC_005228 lsm5 coding downstream 216693 13331526 ~ 13337037 (-)
XLOC_005227 emc9 coding downstream 234761 13311939 ~ 13318969 (-)
XLOC_005226 pelo coding downstream 347876 13188616 ~ 13205854 (-)
XLOC_005225 cxl34c coding downstream 398077 13153184 ~ 13155653 (-)
XLOC_005231 stat5b coding upstream 3546 13560082 ~ 13650472 (-)
XLOC_005232 foxh1 coding upstream 165849 13722385 ~ 13730501 (-)
XLOC_005233 adam11 coding upstream 255095 13811631 ~ 13886952 (-)
XLOC_005234 dbf4b coding upstream 332134 13888670 ~ 13905307 (-)
XLOC_005235 klhl11 coding upstream 404732 13961268 ~ 13966184 (-)
XLOC_005224 NA non-coding downstream 447507 13102866 ~ 13106223 (-)
XLOC_005222 BX572641.1 non-coding downstream 1218399 12335216 ~ 12335331 (-)
XLOC_005214 NA non-coding downstream 2780784 10769131 ~ 10772946 (-)
XLOC_005200 NA non-coding downstream 3423828 10124660 ~ 10129902 (-)
XLOC_005199 BX928755.1 non-coding downstream 3490062 10060636 ~ 10063668 (-)
XLOC_005237 NA non-coding upstream 581750 14138286 ~ 14144159 (-)
XLOC_005240 NA non-coding upstream 1283251 14839787 ~ 14840559 (-)
XLOC_005243 NA non-coding upstream 1561351 15117887 ~ 15120113 (-)
XLOC_005244 NA non-coding upstream 1568873 15125409 ~ 15126049 (-)
XLOC_005246 NA non-coding upstream 1686031 15242567 ~ 15244000 (-)

Expression


Co-expression Network