zbtb14 (zbtb14,LOC107698704,LOC106590341)


Basic Information

Item Value
gene id zbtb14
gene name zbtb14,LOC107698704,LOC106590341
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 5071324 ~ 5074326 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913347.2
atacacacactcactcactcactcacacacattcacacacacactgagtccaGTGTACATAAACTGCCACCATGTAGCCTGGTTATAACAAGATTTTACCTGATGAATAGACATTTTATTCACCTTTACGAGGATTTTAGTTGctaatttgttttgtgtgtgtgatataacaATGGTTTGCTAATGATAGTTAGCTACACTGCTAGCTAGCTGGCCGGTGAATTtataaagctagctagctagctagctggctggcTAGCTAGCCGTCTTGCTAAATGCTAACCGTACATAAAAGCCTCTGCCTTTTGAGATACCATAACAAGATGGTTGCTAACCGGGGTGGCTAATGCTGCAGaaccctgttccagcatgtcaGAAACTTTGAAATATGTGGATGATGAACACAAAACTATTTTCCTGAAGATTTTGAACGAGCAGCGACTAGAAGGCGAGCACTGTGACATAGCTGTGGTGGTCGAAGACGTTAAGTTCAGGGCACATCGATGTGTGTTAGCAGCTTGCAGCAATTACTTCAAAAAGCTTTTTAAGAAGCACGAGGTGGACAGCTCCTCGGTCATCGAGATTGACTTCATCCGCTCGGACATCTTCGAAGAGGTGCTGAACTACATGTACACAGCCAAGATTTCAGTTAAGAAGAAAGATGTCAATTTAATGATGTCATCTGGACAAATACTCGGAATACGTTTTTTGGACAAGCTCTGCTCTCAGAAACGCGACATGTCCTCTGAGGAGAAAAATGACCATAAAAATGCCAAATATCCCTACGACCTTGTGAAAATCGGGCTCCAACCGGAGGAGCCCCAGTTAAATCAAGACAATGATGTCCAGGTCATTGGGGACCAGGACGACACTCCATCTGACGATATCGTGGAGGAACCTCAAGGCAATCACGATCTAGATAAATCACCCAACAGTGACCTGCGAGTGGAGGAAGCCACTTCACTTTTGAAAGAGCTAACCCAGGAGGAAGTACACAAAGTTGCCTGCTATGATCAGGATGTGGAAGCAATGGACACTGAGCCCAAAGAGCTTGCGGCTCACACCCAGACCCTTGCGTTTGCTGACAGCATGGGGGACGTTAAGGACGAGCAAGCTCCTGGATGGAGCATGGCTACTGCAGACATGAAACTTGAATACCTGCTGTACGGCCACAGGGACCAGTTCGCCTGCCAGGTTTGCGGGAAGACCTTCGTGGACGAGAACCGACTGAGgaaacatgaaaagctgcattcTGCTGAGAGACCGTTCATATGTGAGAGATGCACCAAAGCATTCACCACACAGGCCCACTTGAAAGAGCATTTAAAAATCCACACTGGCTTCAAACCCTACAGATGCGAAGACTGTGGCAAGTCTTTCATCCGCGCCCCAGATCTGAAGAAACACGAGAGGGTGCACAGCAACGAGCGGCCCTTCAACTGCCACATGTGTGAGAAAGCTTTTAAACACAAGTCCCACCTGAAGGACCACGAACGGCGACACCGAGGCGAGAAGCCTTTCAGGTGTAGCTCCTGCACCAAGGCCTTTGCCAAAGCGTCAGATCTCAAGAGACATGAGAACAACATGCACAGTGAAAGGAAGCAGCTGTCTGCAAACAGCTTGCAGAGTGAGACTGAACAGCTGCAAGCGGCAGCGATGGCAGCGGAGGCCGAGCAGCAACTGGAATCCATAGCATGTTCATAACATAACGTGTGTGTTCAATACACTCACACTAATGCACTGTAGAACAATCTTTTCTTACCCATTTCGATATGGTAAACAGATGCAGTCTTATTGTTTTGGTCTGGTTTACgttctgtttttttaactattaGATTATCAGATCTTGatagtttattaattttagaCAGATAAGTTGATTAacactgtttaatgtttttattttcttccagatgtaaatggtgcaaaaaattTTCTCACTGTAAACTTCATACCAAATGTATTTGAGTATTTGTGGCAGTGCAATGGACAATGAATTGTACTGACTTACACTTGTTGACACAGTACACATGCACAGTGCCAGTTTTGCTAAGAAAACAGAATTATCAAAATGCTGATAAAAAAATTATGTCTTTGATGGTCAATCTTTCCATCAACTACCTTGCAAGATGAAAATAAGATTTACCTTATTGATATTtttgctgtaataaaaaaaaaggcatttccaATA
>XM_026913348.2
GTCCTCCCGCGTGTGTGTGCTCGTCCTCAGGccaacaaaacacaaagtgcATTATTCACCACTGGCTGCGTGACATTCAACGTAGACTTCTCCAGGGGATCAAAACGCCACGTAAGGaaccctgttccagcatgtcaGAAACTTTGAAATATGTGGATGATGAACACAAAACTATTTTCCTGAAGATTTTGAACGAGCAGCGACTAGAAGGCGAGCACTGTGACATAGCTGTGGTGGTCGAAGACGTTAAGTTCAGGGCACATCGATGTGTGTTAGCAGCTTGCAGCAATTACTTCAAAAAGCTTTTTAAGAAGCACGAGGTGGACAGCTCCTCGGTCATCGAGATTGACTTCATCCGCTCGGACATCTTCGAAGAGGTGCTGAACTACATGTACACAGCCAAGATTTCAGTTAAGAAGAAAGATGTCAATTTAATGATGTCATCTGGACAAATACTCGGAATACGTTTTTTGGACAAGCTCTGCTCTCAGAAACGCGACATGTCCTCTGAGGAGAAAAATGACCATAAAAATGCCAAATATCCCTACGACCTTGTGAAAATCGGGCTCCAACCGGAGGAGCCCCAGTTAAATCAAGACAATGATGTCCAGGTCATTGGGGACCAGGACGACACTCCATCTGACGATATCGTGGAGGAACCTCAAGGCAATCACGATCTAGATAAATCACCCAACAGTGACCTGCGAGTGGAGGAAGCCACTTCACTTTTGAAAGAGCTAACCCAGGAGGAAGTACACAAAGTTGCCTGCTATGATCAGGATGTGGAAGCAATGGACACTGAGCCCAAAGAGCTTGCGGCTCACACCCAGACCCTTGCGTTTGCTGACAGCATGGGGGACGTTAAGGACGAGCAAGCTCCTGGATGGAGCATGGCTACTGCAGACATGAAACTTGAATACCTGCTGTACGGCCACAGGGACCAGTTCGCCTGCCAGGTTTGCGGGAAGACCTTCGTGGACGAGAACCGACTGAGgaaacatgaaaagctgcattcTGCTGAGAGACCGTTCATATGTGAGAGATGCACCAAAGCATTCACCACACAGGCCCACTTGAAAGAGCATTTAAAAATCCACACTGGCTTCAAACCCTACAGATGCGAAGACTGTGGCAAGTCTTTCATCCGCGCCCCAGATCTGAAGAAACACGAGAGGGTGCACAGCAACGAGCGGCCCTTCAACTGCCACATGTGTGAGAAAGCTTTTAAACACAAGTCCCACCTGAAGGACCACGAACGGCGACACCGAGGCGAGAAGCCTTTCAGGTGTAGCTCCTGCACCAAGGCCTTTGCCAAAGCGTCAGATCTCAAGAGACATGAGAACAACATGCACAGTGAAAGGAAGCAGCTGTCTGCAAACAGCTTGCAGAGTGAGACTGAACAGCTGCAAGCGGCAGCGATGGCAGCGGAGGCCGAGCAGCAACTGGAATCCATAGCATGTTCATAACATAACGTGTGTGTTCAATACACTCACACTAATGCACTGTAGAACAATCTTTTCTTACCCATTTCGATATGGTAAACAGATGCAGTCTTATTGTTTTGGTCTGGTTTACgttctgtttttttaactattaGATTATCAGATCTTGatagtttattaattttagaCAGATAAGTTGATTAacactgtttaatgtttttattttcttccagatgtaaatggtgcaaaaaattTTCTCACTGTAAACTTCATACCAAATGTATTTGAGTATTTGTGGCAGTGCAATGGACAATGAATTGTACTGACTTACACTTGTTGACACAGTACACATGCACAGTGCCAGTTTTGCTAAGAAAACAGAATTATCAAAATGCTGATAAAAAAATTATGTCTTTGATGGTCAATCTTTCCATCAACTACCTTGCAAGATGAAAATAAGATTTACCTTATTGATATTtttgctgtaataaaaaaaaaggcatttccaATA

Function

symbol description
zbtb14 Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Orthologous to human ZBTB14 (zinc finger and BTB domain containing 14).

NR:

description
zinc finger and BTB domain-containing protein 14-like isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24804 ZBTB14; zinc finger and BTB domain-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913347.2 True 2191 mRNA 0.44 2 5071324 5074003
XM_026913348.2 False 1953 mRNA 0.45 2 5071324 5074326

Neighbor

gene id symbol gene type direction distance location
top1mt LOC108276921,LOC108432759,LOC107698705,LOC107728997 coding downstream 4075 5051673 ~ 5067249 (-)
LOC113526374 apcdd1 coding downstream 21255 5034397 ~ 5050069 (-)
ppp4r1 ppp4r1,LOC107698697,LOC107729936 coding downstream 49049 5007726 ~ 5022275 (-)
LOC113526378 LOC108271168 coding downstream 92402 4973188 ~ 4978922 (-)
plekho1b LOC108271071 coding downstream 205930 4848059 ~ 4865394 (-)
epb41l3a epb41l3,epb41l3a,LOC108271247,LOC108432756,LOC102298622,LOC107728994 coding upstream 4334 5078660 ~ 5154507 (-)
tmem200ca tmem200c coding upstream 93431 5167757 ~ 5183610 (-)
LOC113526574 l3mbtl4,LOC108432753,LOC106590345,LOC106579653 coding upstream 114879 5189205 ~ 5259141 (-)
lama1 lama1 coding upstream 242637 5316963 ~ 5360724 (-)
nub1 LOC108271334 coding upstream 548171 5622497 ~ 5631660 (-)
G2730 NA non-coding downstream 74875 4947099 ~ 4996449 (-)
G2737 pi4kb,LOC107588477,LOC107556110 non-coding downstream 144336 4925272 ~ 4926988 (-)
G2711 NA non-coding downstream 180374 4890262 ~ 4890950 (-)
G2714 NA non-coding downstream 239880 4829901 ~ 4831444 (-)
G2586 NA non-coding downstream 260422 4810702 ~ 4810902 (-)
G3174 NA non-coding upstream 683721 5758047 ~ 5818591 (-)
G3177 NA non-coding upstream 688814 5763140 ~ 5772188 (-)
G3410 NA non-coding upstream 928634 6002960 ~ 6004149 (-)
G3409 LOC108271438 non-coding upstream 930543 6004869 ~ 6010590 (-)
G3414 NA non-coding upstream 939649 6013975 ~ 6016122 (-)
LOC113526375 NA other downstream 84614 4979656 ~ 4986710 (-)
G2709 NA other downstream 166117 4900886 ~ 4905207 (-)
LOC113526660 LOC108280225 other downstream 181726 4880803 ~ 4889598 (-)
nagpa nagpa other downstream 1087833 3969392 ~ 3983491 (-)
G2020 NA other downstream 1395488 3674246 ~ 3675836 (-)
G3420 NA other upstream 995033 6069359 ~ 6085656 (-)
LOC113526501 LOC100001114,LOC107686888,LOC107753050,LOC108271494,LOC107560367,LOC102294047 other upstream 1024938 6099264 ~ 6177027 (-)
kcnh2b kcnh2,kcnh2b,LOC103370207,LOC107753075,LOC107713341,LOC107667232,LOC107686960 other upstream 1109808 6184134 ~ 6391389 (-)
fxyd6l LOC108272023 other upstream 2831469 7905795 ~ 7921928 (-)
LOC113526670 NA other upstream 3226316 8300642 ~ 8302301 (-)

Expression


Co-expression Network