mettl8 (mettl8)


Basic Information

Item Value
gene id mettl8
gene name mettl8
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 17028237 ~ 17039843 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU99754
TGACCCCCGCTGACCTGAAGCCTAACAGCACGCAGGCGTTGGTTATTCGCGATGTTGCCGCTAGAGGGCGCACAGCACGAGAACGCTCCAAACACATGGAGGAGGATGTAGACACCATTGACACTATTTTCAACTGGAGAACAGCGCACACAGatctggagcctatcccaggattACTGGGTGCAAAGTGGGAATACAGCCGGACACAGGGAATACATGCACAGAAACCGACAATACCCTAAGCTCAGGAATGGACCAGGGACACTGGAGATTTCTCCTCATCACATGAAAGAGTGAAAATGAGAAGATTGCTGAAGATGACGGTGTCGGCTGTGGTCCGTGGTGTTGGACATGTTCCCTGCAGATGTCTCGGGGGACGACCTCCTGCACCACTCGGAGGCAGAATCCTCACCAACCCTAAGGACATCTTCCAGCATAACATGTGGGATCATGTTCAGTGGTCACCAGAGGAGATGGAAGAAGCCAGACAAAAAGCAGAGGAGAACTCCAGAGAACAGATTCCAATAGAAGAACAAGGGCTGTGACACAAGTCGTACCCCAGAAGGTCAGGAGGCTTCAGCGCCAGTATATCCTGAGTTAAGAGAAACTCAGCACAGCAGGTTGGAAAGCCAAAAGGGAGACGATCACATTCCCAACCATGATGTACTGAGAGAGAAGCAGCACACTGATTACCTTTCTGCAGTGCCCTCTCAAGAAGCTGCTGCTTTTCCTGGTCAACATGCTTCTTTCAGAATACTGGAGGTGGGCTGTGGTGCAGGCAACAGTGTATTCCCTATCATCAACGCCATCAGGGGCAGTGATGCATTCCTGTACTGCTTTGACTTTTCTTCCAGAGCAATCCAACTTGTCAAGGAGCATCCAGACTACGATCCTGCAGTGTGCCATGCATTTGTGCAAGACATTTGTGATGATGTGTCCATGTTTCCCTTTCCTCAGGAGAGTCTTGATGTTattgttgtggtgtttgtgcTCTCCTCCATTCACCCTGAGAGGATGCAAAGAGTGCTTAATCGTCTGGCAAGCTACCTGAAGCACGGAGGAACCATCCTGTTCAGAGATTATGGCAGATATGATCTGGCTCAGCTGCGATTCAAAAAAGGGCAGTGTCTGTCTGAAAATTTCTACACACGACAAGATGGAACCTGCGTATATTTCTTTATGAAAGATGAGGTCCATCGGTTGTTCACTAATGCCGGTTTGGAGGAGGTTCAGAACCTGGAAGACAGGAGACTTCAGGTGAACCGAGGAAAGAAAGTAGTGATGCATAGAGTATGGATGCAGAGCAAGTACCGAAAACCTTCCAGAGTACCGATATCCTAGACCTCTCAACACCAGGAAGCTGACCACTGGGACTGCTTATGTGGAAGCATATAAGCATATACGGACATAAAATAACCATGATGGAAATACAAACATGGATTTAGTGGTTTGTCTGTGAATTAATTCACGTCTGTCAGTGAGTGGTGTAAAAGGGGGTATTAAGTGAACTGGCCACAAGCtggaaagaaatgagaaaagtCAGTGCAAGGGGtcatttaacttatttttcAAAGTAGATACTGAATTTTACC
>XM_026911159.2
CGCAGGCGTTGGTTATTCGCGATGTTGCCGCTAGAGGGCGCACAGCACGAGAACGCTCCAAACACATGGAGGAGGATGTAGACACCATTGACACTATTTTCAACTGGAGAACAGCGCACACAGatctggagcctatcccaggattACTGGGTGCAAAGTGGGAATACAGCCGGACACAGGGAATACATGCACAGAAACCGACAATACCCTAAGCTCAGGAATGGACCAGGGACACTGGAGATTTCTCCTCATCACATGAAAGAGTGAAAATGAGAAGATTGCTGAAGATGACGGTGTCGGCTGTGGTCCGTGGTGTTGGACATGTTCCCTGCAGATGTCTCGGGGGACGACCTCCTGCACCACTCGGAGGCAGAATCCTCACCAACCCTAAGGACATCTTCCAGCATAACATGTGGGATCATGTTCAGTGGTCACCAGAGGAGATGGAAGAAGCCAGACAAAAAGCAGAGGAGAACTCCAGAGAACAGATTCCAATAGAAGAACAAGTCAGGTATGACAGAGACGCTAACAAATATTGGGACAGATTTTACGAAATGCATCAAAACAAGTTCTTCAAAAATCGGCAGTGGCTTTTCTCTGAGTTTCCCGAGCTCTTGCCCCAGGGCTGTGACACAAGTCGTACCCCAGAAGGTCAGGAGGCTTCAGCGCCAGTATATCCTGAGTTAAGAGAAACTCAGCACAGCAGGTTGGAAAGCCAAAAGGGAGACGATCACATTCCCAACCATGATGTACTGAGAGAGAAGCAGCACACTGATTACCTTTCTGCAGTGCCCTCTCAAGAAGCTGCTGCTTTTCCTGGTCAACATGCTTCTTTCAGAATACTGGAGGTGGGCTGTGGTGCAGGCAACAGTGTATTCCCTATCATCAACGCCATCAGGGGCAGTGATGCATTCCTGTACTGCTTTGACTTTTCTTCCAGAGCAATCCAACTTGTCAAGGAGCATCCAGACTACGATCCTGCAGTGTGCCATGCATTTGTGCAAGACATTTGTGATGATGTGTCCATGTTTCCCTTTCCTCAGGAGAGTCTTGATGTTattgttgtggtgtttgtgcTCTCCTCCATTCACCCTGAGAGGATGCAAAGAGTGCTTAATCGTCTGGCAAGCTACCTGAAGCACGGAGGAACCATCCTGTTCAGAGATTATGGCAGATATGATCTGGCTCAGCTGCGATTCAAAAAAGGGCAGTGTCTGTCTGAAAATTTCTACACACGACAAGATGGAACCTGCGTATATTTCTTTATGAAAGATGAGGTCCATCGGTTGTTCACTAATGCCGGTTTGGAGGAGGTTCAGAACCTGGAAGACAGGAGACTTCAGGTGAACCGAGGAAAGAAAGTAGTGATGCATAGAGTATGGATGCAGAGCAAGTACCGAAAACCTTCCAGAGTACCGATATCCTAGACCTCTCAACACCAGGAAGCTGACCACTGGGACTGCTTATGTGGAAGCATATAAGCATATACGGACATAAAATAACCATGATGGAAATACAAACATGGATTTAGTGGTTTGTCTGTGAATTAATTCACGTCTGTCAGTGAGTGGTGTAAAAGGGGGTATTAAGTGAACTGGCCACAAGCtggaaagaaatgagaaaagtCAGTGCAAGGGGtcatttaacttatttttcAAAGTAGATACTGAATTTTACCAAATACATGATTGTTATTTTactaatgtgttattttatttatgtgaataaagacagttcaattcaattca
>XM_026911166.2
CGCAGGCGTTGGTTATTCGCGATGTTGCCGCTAGAGGGCGCACAGCACGAGAACGCTCCAAACACATGGAGGAGGATGTAGACACCATTGACACTATTTTCAACTGGAGAACAGCGCACACAGTTCTCCTCATCACATGAAAGAGTGAAAATGAGAAGATTGCTGAAGATGACGGTGTCGGCTGTGGTCCGTGGTGTTGGACATGTTCCCTGCAGATGTCTCGGGGGACGACCTCCTGCACCACTCGGAGGCAGAATCCTCACCAACCCTAAGGACATCTTCCAGCATAACATGTGGGATCATGTTCAGTGGTCACCAGAGGAGATGGAAGAAGCCAGACAAAAAGCAGAGGAGAACTCCAGAGAACAGATTCCAATAGAAGAACAAGTCAGGTATGACAGAGACGCTAACAAATATTGGGACAGATTTTACGAAATGCATCAAAACAAGTTCTTCAAAAATCGGCAGTGGCTTTTCTCTGAGTTTCCCGAGCTCTTGCCCCAGGGCTGTGACACAAGTCGTACCCCAGAAGGTCAGGAGGCTTCAGCGCCAGTATATCCTGAGTTAAGAGAAACTCAGCACAGCAGGTTGGAAAGCCAAAAGGGAGACGATCACATTCCCAACCATGATGTACTGAGAGAGAAGCAGCACACTGATTACCTTTCTGCAGTGCCCTCTCAAGAAGCTGCTGCTTTTCCTGGTCAACATGCTTCTTTCAGAATACTGGAGGTGGGCTGTGGTGCAGGCAACAGTGTATTCCCTATCATCAACGCCATCAGGGGCAGTGATGCATTCCTGTACTGCTTTGACTTTTCTTCCAGAGCAATCCAACTTGTCAAGGAGCATCCAGACTACGATCCTGCAGTGTGCCATGCATTTGTGCAAGACATTTGTGATGATGTGTCCATGTTTCCCTTTCCTCAGGAGAGTCTTGATGTTattgttgtggtgtttgtgcTCTCCTCCATTCACCCTGAGAGGATGCAAAGAGTGCTTAATCGTCTGGCAAGCTACCTGAAGCACGGAGGAACCATCCTGTTCAGAGATTATGGCAGATATGATCTGGCTCAGCTGCGATTCAAAAAAGGGCAGTGTCTGTCTGAAAATTTCTACACACGACAAGATGGAACCTGCGTATATTTCTTTATGAAAGATGAGGTCCATCGGTTGTTCACTAATGCCGGTTTGGAGGAGGTTCAGAACCTGGAAGACAGGAGACTTCAGGTGAACCGAGGAAAGAAAGTAGTGATGCATAGAGTATGGATGCAGAGCAAGTACCGAAAACCTTCCAGAGTACCGATATCCTAGACCTCTCAACACCAGGAAGCTGACCACTGGGACTGCTTATGTGGAAGCATATAAGCATATACGGACATAAAATAACCATGATGGAAATACAAACATGGATTTAGTGGTTTGTCTGTGAATTAATTCACGTCTGTCAGTGAGTGGTGTAAAAGGGGGTATTAAGTGAACTGGCCACAAGCtggaaagaaatgagaaaagtCAGTGCAAGGGGtcatttaacttatttttcAAAGTAGATACTGAATTTTACCAAATACATGATTGTTATTTTactaatgtgttattttatttatgtgaataaagacagttcaattcaattca
>XM_026911173.2
CGCAGGCGTTGGTTATTCGCGATGTTGCCGCTAGAGGGCGCACAGCACGAGAACGCTCCAAACACATGGAGGAGGATGTAGACACCATTGACACTATTTTCAACTGGAGAACAGCGCACACAGatctggagcctatcccaggattACTGGGTGCAAAGTGGGAATACAGCCGGACACAGGGAATACATGCACAGAAACCGACAATACCCTAAGCTCAGGAATGGACCAGGGACACTGGAGATTTCTCCTCATCACATGAAAGAGTGAAAATGAGAAGATTGCTGAAGATGACGGTGTCGGCTGTGGTCCGTGGTGTTGGACATGTTCCCTGCAGATGTCTCGGGGGACGACCTCCTGCACCACTCGGAGGCAGAATCCTCACCAACCCTAAGGACATCTTCCAGCATAACATGTGGGATCATGTTCAGTGGTCACCAGAGGAGATGGAAGAAGCCAGACAAAAAGCAGAGGAGAACTCCAGAGAACAGATTCCAATAGAAGAACAAGTCAGGTATGACAGAGACGCTAACAAATATTGGGACAGATTTTACGAAATGCATCAAAACAAGTTCTTCAAAAATCGGCAGTGGCTTTTCTCTGAGTTTCCCGAGCTCTTGCCCCAGGGCTGTGACACAAGTCGTACCCCAGAAGGTCAGGAGGCTTCAGCGCCAGTATATCCTGAGTTAAGAGAAACTCAGCACAGCAGGTTGGAAAGCCAAAAGGGAGACGATCACATTCCCAACCATGATGTACTGAGAGAGAAGCAGCACACTGATTACCTTTCTGCAGTGCCCTCTCAAGAAGCTGCTGCTTTTCCTGGTCAACATGCTTCTTTCAGAATACTGGAGGTGGGCTGTGGTGCAGGCAACAGTGTATTCCCTATCATCAACGCCATCAGGGGCAGTGATGCATTCCTGTACTGCTTTGACTTTTCTTCCAGAGCAATCCAACTTGTCAAGGAGAGTCTTGATGTTattgttgtggtgtttgtgcTCTCCTCCATTCACCCTGAGAGGATGCAAAGAGTGCTTAATCGTCTGGCAAGCTACCTGAAGCACGGAGGAACCATCCTGTTCAGAGATTATGGCAGATATGATCTGGCTCAGCTGCGATTCAAAAAAGGGCAGTGTCTGTCTGAAAATTTCTACACACGACAAGATGGAACCTGCGTATATTTCTTTATGAAAGATGAGGTCCATCGGTTGTTCACTAATGCCGGTTTGGAGGAGGTTCAGAACCTGGAAGACAGGAGACTTCAGGTGAACCGAGGAAAGAAAGTAGTGATGCATAGAGTATGGATGCAGAGCAAGTACCGAAAACCTTCCAGAGTACCGATATCCTAGACCTCTCAACACCAGGAAGCTGACCACTGGGACTGCTTATGTGGAAGCATATAAGCATATACGGACATAAAATAACCATGATGGAAATACAAACATGGATTTAGTGGTTTGTCTGTGAATTAATTCACGTCTGTCAGTGAGTGGTGTAAAAGGGGGTATTAAGTGAACTGGCCACAAGCtggaaagaaatgagaaaagtCAGTGCAAGGGGtcatttaacttatttttcAAAGTAGATACTGAATTTTACCAAATACATGATTGTTATTTTactaatgtgttattttatttatgtgaataaagacagttcaattcaattca

Function

symbol description
mettl8 Predicted to enable tRNA (cytosine-3-)-methyltransferase activity. Predicted to act upstream of or within methylation. Orthologous to human METTL8 (methyltransferase 8, methylcytidine).

NR:

description
methyltransferase-like protein 8 isoform X3

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6

RNA

RNA id representative length rna type GC content exon number start site end site
TU99754 False 1592 TUCP 0.48 11 17028307 17039843
XM_026911159.2 True 1748 mRNA 0.46 11 17028237 17039813
XM_026911166.2 False 1629 mRNA 0.46 10 17028237 17039813
XM_026911173.2 False 1664 mRNA 0.46 11 17028237 17039813

Neighbor

gene id symbol gene type direction distance location
tlk1a tlk1 coding downstream 2707 17002118 ~ 17025530 (-)
mylka LOC108266375,LOC108424386,LOC107559533 coding downstream 352970 16617571 ~ 16675267 (-)
fmnl2a fmnl2 coding downstream 414054 16562674 ~ 16614183 (-)
galnt13 galnt13 coding downstream 511950 16472059 ~ 16516287 (-)
kcnj3a kcnj3 coding downstream 571025 16429932 ~ 16457212 (-)
itga6a itga6,itga6a,LOC107745248,LOC107742949,LOC107671295,LOC107657398 coding upstream 12214 17052057 ~ 17071808 (-)
dlx1a dlx1,dlx1a,LOC107742982 coding upstream 55231 17095074 ~ 17097982 (-)
hat1 hat1,LOC106581768 coding upstream 90147 17129990 ~ 17148675 (-)
dync1i2a dync1i2 coding upstream 136838 17176681 ~ 17209898 (-)
ppp1r9ala LOC108266327 coding upstream 176878 17216721 ~ 17249832 (-)
G83953 NA non-coding downstream 62064 16965511 ~ 16966173 (-)
G83614 NA non-coding downstream 618344 16409428 ~ 16409893 (-)
LOC117597324 NA non-coding downstream 799800 16224341 ~ 16228437 (-)
G83474 NA non-coding downstream 955166 16072840 ~ 16073071 (-)
G83473 NA non-coding downstream 955553 16072397 ~ 16072684 (-)
G84061 NA non-coding upstream 87467 17127310 ~ 17128680 (-)
G84177 NA non-coding upstream 267726 17307569 ~ 17311955 (-)
G84182 NA non-coding upstream 284202 17324045 ~ 17324878 (-)
G84189 LOC108266646 non-coding upstream 292649 17332492 ~ 17346350 (-)
G84227 NA non-coding upstream 351841 17391684 ~ 17391947 (-)
si:dkey-91i10.2 LOC108266132,LOC106530433,LOC107658202 other downstream 621759 16370227 ~ 16406478 (-)
G83554 NA other downstream 807371 16219964 ~ 16220866 (-)
lmo7a lmo7 other downstream 951617 16043283 ~ 16076620 (-)
pou1f1 pou1f1,LOC107688653,LOC107661330,LOC107561319 other downstream 1054323 15943740 ~ 15973914 (-)
LOC117597380 NA other downstream 1913542 15106949 ~ 15114695 (-)
sp3a sp3 other upstream 332136 17371979 ~ 17381172 (-)
evx2 evx2,LOC107657379,LOC107671304 other upstream 655447 17695290 ~ 17699980 (-)
LOC113526313 baz2b other upstream 1873544 18913387 ~ 18968492 (-)
grb14 grb14 other upstream 2403248 19443091 ~ 19494515 (-)
steap3 steap3,dbi,LOC107560815,LOC107747240 other upstream 2528906 19568749 ~ 19586103 (-)

Expression


Co-expression Network