stk39 (stk39,LOC107707604,LOC107708317)


Basic Information

Item Value
gene id stk39
gene name stk39,LOC107707604,LOC107708317
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 18670051 ~ 18703548 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913146.2
GACGCGACCTCCGCTAGAGCCAGCTGAGGACGCTGTGACGGTTAGCCGCTAGCATAGCCGCTCCTGGCTGTAGCGCAGCCATCCGCAGCATCATGGCGGAGCGAAGCCACTCATCTGCGGCTCCGGCTACCGGCCACAGTCCGCAAGCGGGAACCACAGCCGGTTGGCCAATTGTGAAGGAGGCGTACGAGCTGCAGGATGTTATAGGCAGTGGAGCCACAGCAGTAGTCCAGGCTGCTCTCTGCCTCCCTCGACAAGAACGTGTGGCCATCAAGAGGATCAACCTGGAGAAATGCCAGACCAGCATGGAAGAACTACTGAAAGAAATCCAAGCCATGAGCCAGTGCAACCATCCGAATGTAGTGACATATTATACCTCATTTGTGGTGAAGGATGAGCTTTGGTTGGTTATGAAACTATTGAGTGGAGGATCAGTATTGGACATCATAAAGCACGCATGTAGCAAAGGAGAGCACAGAAATGGCGTATTGGATGAACCCACGATAGCTACTATTTTAAAAGAGGTCTTAGAGGGTCTTGATTACCTGCACAGAAATGGACAAATTCACAGGGATGTGAAAGCTGGGAACATCCTGTTGGGAGAGGACGGCTCAGTGCAGATAGCAGACTTTGGGGTGAGTGCATTTCTGGCGACCGGAGGAGACGTAACCAGACATAAAGTTAGGAAAACTTTTGTGGGAACTCCATGTTGGATGGCTCCAGAAGTGATGGAACAGGTACGAGGTTATGATTTCAAAGCTGACATTTGGAGTTTTGGGATCACTGCCATAGAGTTGGCCACAGGATCTGCACCCTATCATCGATACCCACCTATGAAGGTTTTAATGCTGACACTGCAGAATGATCCCCCAACCTTAGAGACAGAAGTGGAGGATAAAGAGATGCTAAAGAAATATGGGAAATCTTTTAGGAAACTAATAACTCTGTGCCTTCAAAAGGACCCGACTAAGAgGCCAACTGCATCAGAACTTTTGAAATGTAAATTCTTCCAAAAAGCCAAgAACCGGGAATACTTGAttgaaaagctgctttgtaaagGACCAAATATAAGCCAAAGAGCTAAAAAGGTCAGACGAGTGCCAGGATCAAGCGGTCGCTTGCACAAGATGGAGGATGGAGACTGGGAATGGAGTGATGATGAGATGGATGAAAGGAGTGAAGAAGGGAAGGCAGCTGTTAATCAAGGAAGGTCACGGAGGGTCAAAGATGAAAACCAGCATagGGAAGTGAATGCCAACAATGTCCCTATAGAAGGCCTGTCCATTCAGCATCCCCAGATTCAACCTCTGGAAAAAAGCCCAAGCACTCAGGGTGCTGTGAACATGGTCCTGAGGCTAAGgAACTCGAGGAAGGAGTTGAATGACATACGGTTTGAATTCACTCCAGGCCGAGATACTGCTGACGgtgtttctcaggaactgtTTTCTGCTGGTCTAGTCAATGGACATGATGTTGTAGTTGTTGCTGCTAACCTTCAGAAAATTGTAGAAGACCCAGTTACCTATAAAGTGTTGACCTTTAAACTGgcATCTGGCTGTGAAAGTACAGAGATCCCTGACGAGGTGAAGCTAATTGGCTTTGCCCAGCTCAGTGTTACCTGATGGTGTACGTCTgagggaagaggaagaggatgggAGGAGGAAGAAGGCTTTGAACGGAAAGTCTGAATGCTAACGAAAGTGCAGACTGGGGGTTTAGGAGCCATCTCCAGCTTACTCCCAGCTCAAGCTCCTCTCTCAGCTCTATCCTCATTTTAATTACCTTCTAACTGTCAATAACTAAGCATTCTGTCAATAactaaagaaaacacacacagtcagcttCCCTTGCCCTACATTCAGCTCCTGCAATGTCTTTCCTCAACATTCCACCTCCCTCTTCCCCTCAGCCCTGCTAACTTGATGCTCTCAGGTGGCTACAGCCagcaatcacaaaaaaaaagaattagagtttatctcattattattgtgttacATTTGCTTTCAGcaaagctattattattattattattattattattatttattggcAAAAGCCTTCAATTTTCCTTTCCTTGTTTTGAAAGATGAACTTTTCTGATGCGCACATTAACACTGCAAAACTTGGTGTTAAGTCAGTTATTTGAAGTCCTCCTTTCTTccaaatgtaatgtaatcttatttatgaaaaataagcACATTATTATTCATGATTCTATAATTAATACTGTTTTAAAAGTGAACCGttctgtactgtatgtacacaaaatatttaatccACTAAGAATGAATGAAACCGTTTTCCCCCCCAGGAAGTAGGAGGCGAGAACTGAATGCTGCCATGTGCAAATGTACTTGCTTATTTTTCAGGACAGTGTTGACGCTTAACTGCTAGTGGTGCCTTGTTCATTAATCCGTGCCTAAGAACACAGGTAACAAGCCGGAGCTGTTTAAAGCATAGACTGCTTTATGTTGTTAAACCAAGGAGAATTGCTTTTTCAGCTGATAGCtccatttaaaagtattttcacTGGCAAATGGCTTATGTTGAAAACGACAAAGCTTTAATGCACTTTGATTTTGGATTGTGCAATGTACACGTGCTTTTCCCCTGGAAACCCTCCAGATTTAACCTCTAAAGCTTTGTTCAATGACAGAAAGGTCATTATAACTGTAATGCACACCTGAACTGTGATATGATGGGAAAAAGCCAGCTGCTGAGTATAAAGAAGTAGCCGCGA
>XM_034304810.1
GTGGACGCGACCTCCGCTAGAGCCAGCTGAGGACGCTGTGACGGTTAGCCGCTAGCATAGCCGCTCCTGGCTGTAGCGCAGCCATCCGCAGCATCATGGCGGAGCGAAGCCACTCATCTGCGGCTCCGGCTACCGGCCACAGTCCGCAAGCGGGAACCACAGCCGGTTGGCCAATTGTGAAGGAGGCGTACGAGCTGCAGGATGTTATAGGCAGTGGAGCCACAGCAGTAGTCCAGGCTGCTCTCTGCCTCCCTCGACAAGAACGTGTGGCCATCAAGAGGATCAACCTGGAGAAATGCCAGACCAGCATGGAAGAACTACTGAAAGAAATCCAAGCCATGAGCCAGTGCAACCATCCGAATGTAGTGACATATTATACCTCATTTGTGGTGAAGGATGAGCTTTGGTTGGTTATGAAACTATTGAGTGGAGGATCAGTATTGGACATCATAAAGCACGCATGTAGCAAAGGAGAGCACAGAAATGGCGTATTGGATGAACCCACGATAGCTACTATTTTAAAAGAGGTCTTAGAGGGTCTTGATTACCTGCACAGAAATGGACAAATTCACAGGGATGTGAAAGCTGGGAACATCCTGTTGGGAGAGGACGGCTCAGTGCAGATAGCAGACTTTGGGGTGAGTGCATTTCTGGCGACCGGAGGAGACGTAACCAGACATAAAGTTAGGAAAACTTTTGTGGGAACTCCATGTTGGATGGCTCCAGAAGTGATGGAACAGGTACGAGGTTATGATTTCAAAGCTGACATTTGGAGTTTTGGGATCACTGCCATAGAGTTGGCCACAGGATCTGCACCCTATCATCGATACCCACCTATGAAGGTTTTAATGCTGACACTGCAGAATGATCCCCCAACCTTAGAGACAGAAGTGGAGGATAAAGAGATGCTAAAGAAATATGGGAAATCTTTTAGGAAACTAATAACTCTGTGCCTTCAAAAGGACCCGACTAAGAgGCCAACTGCATCAGAACTTTTGAAATGTAAATTCTTCCAAAAAGCCAAgAACCGGGAATACTTGAttgaaaagctgctttgtaaagGACCAAATATAAGCCAAAGAGCTAAAAAGGTGCCAGTGGAGAGGCAAAGGGACGCTGGCCTGCCGGCGTGTTCAGAGAGGGAGCATGATGCTGGCAGAAGGGTCAGACGAGTGCCAGGATCAAGCGGTCGCTTGCACAAGATGGAGGATGGAGACTGGGAATGGAGTGATGATGAGATGGATGAAAGGAGTGAAGAAGGGAAGGCAGCTGTTAATCAAGGAAGGTCACGGAGGGTCAAAGATGAAAACCAGCATagGGAAGTGAATGCCAACAATGTCCCTATAGAAGGCCTGTCCATTCAGCATCCCCAGATTCAACCTCTGGAAAAAAGCCCAAGCACTCAGGGTGCTGTGAACATGGTCCTGAGGCTAAGgAACTCGAGGAAGGAGTTGAATGACATACGGTTTGAATTCACTCCAGGCCGAGATACTGCTGACGgtgtttctcaggaactgtTTTCTGCTGGTCTAGTCAATGGACATGATGTTGTAGTTGTTGCTGCTAACCTTCAGAAAATTGTAGAAGACCCAGTTACCTATAAAGTGTTGACCTTTAAACTGgcATCTGGCTGTGAAAGTACAGAGATCCCTGACGAGGTGAAGCTAATTGGCTTTGCCCAGCTCAGTGTTACCTGATGGTGTACGTCTgagggaagaggaagaggatgggAGGAGGAAGAAGGCTTTGAACGGAAAGTCTGAATGCTAACGAAAGTGCAGACTGGGGGTTTAGGAGCCATCTCCAGCTTACTCCCAGCTCAAGCTCCTCTCTCAGCTCTATCCTCATTTTAATTACCTTCTAACTGTCAATAACTAAGCATTCTGTCAATAactaaagaaaacacacacagtcagcttCCCTTGCCCTACATTCAGCTCCTGCAATGTCTTTCCTCAACATTCCACCTCCCTCTTCCCCTCAGCCCTGCTAACTTGATGCTCTCAGGTGGCTACAGCCagcaatcacaaaaaaaaagaattagagtttatctcattattattgtgttacATTTGCTTTCAGcaaagctattattattattattattattattattatttattggcAAAAGCCTTCAATTTTCCTTTCCTTGTTTTGAAAGATGAACTTTTCTGATGCGCACATTAACACTGCAAAACTTGGTGTTAAGTCAGTTATTTGAAGTCCTCCTTTCTTccaaatgtaatgtaatcttatttatgaaaaataagcACATTATTATTCATGATTCTATAATTAATACTGTTTTAAAAGTGAACCGttctgtactgtatgtacacaaaatatttaatccACTAAGAATGAATGAAACCGTTTTCCCCCCCAGGAAGTAGGAGGCGAGAACTGAATGCTGCCATGTGCAAATGTACTTGCTTATTTTTCAGGACAGTGTTGACGCTTAACTGCTAGTGGTGCCTTGTTCATTAATCCGTGCCTAAGAACACAGGTAACAAGCCGGAGCTGTTTAAAGCATAGACTGCTTTATGTTGTTAAACCAAGGAGAATTGCTTTTTCAGCTGATAGCtccatttaaaagtattttcacTGGCAAATGGCTTATGTTGAAAACGACAAAGCTTTAATGCACTTTGATTTTGGATTGTGCAATGTACACGTGCTTTTCCCCTGGAAACCCTCCAGATTTAACCTCTAAAGCTTTGTTCAATGACAGAAAGGTCATTATAACTGTAATGCACACCTGAACTGTGATATGATGGGAAAAAGCCAGCTGCTGAGTATAAAGAAGTAGCCGCGA

Function

symbol description
stk39 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STK39 (serine/threonine kinase 39).

NR:

description
STE20/SPS1-related proline-alanine-rich protein kinase

GO: NA

KEGG:

id description
K08835 OXSR1, STK39; serine/threonine-protein kinase OSR1/STK39

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913146.2 False 2740 mRNA 0.44 18 18670051 18703545
XM_034304810.1 True 2815 mRNA 0.45 19 18670051 18703548

Neighbor

gene id symbol gene type direction distance location
csrnp3 csrnp3,LOC107674773,LOC107722915 coding downstream 172642 18468952 ~ 18497409 (-)
slc38a11 slc38a11 coding downstream 290688 18373177 ~ 18379363 (-)
mbnl2 mbnl2 coding downstream 299398 18341416 ~ 18370653 (-)
LOC113526158 rap2a,LOC103043765,LOC100332969,LOC106582448,LOC103391592,LOC105907999,LOC101166017,LOC107549783 coding downstream 332841 18325407 ~ 18337210 (-)
LOC113526154 farp1 coding downstream 356320 18261235 ~ 18313731 (-)
spc25 spc25 coding upstream 48366 18751914 ~ 18756220 (-)
cd302 cd302 coding upstream 274639 18978187 ~ 18984693 (-)
LOC113525848 rbms1,LOC108266580,LOC105908026,LOC107730583 coding upstream 288500 18992048 ~ 19044656 (-)
gcgb gcg,gcgb,LOC107730589,LOC107677918,LOC107722905,LOC107674768 coding upstream 440644 19144192 ~ 19145405 (-)
fap LOC108267048,LOC108424318 coding upstream 443567 19147115 ~ 19160623 (-)
G85069 NA non-coding downstream 1840 18667991 ~ 18668211 (-)
G84975 xirp2 non-coding downstream 114186 18540353 ~ 18555865 (-)
G84883 LOC108266575,LOC108424342 non-coding downstream 532968 18135669 ~ 18137083 (-)
G84882 LOC108266575 non-coding downstream 534437 18134836 ~ 18135614 (-)
G84880 ino80d,LOC106582458 non-coding downstream 536362 18133402 ~ 18133689 (-)
G85205 NA non-coding upstream 334679 19038227 ~ 19038432 (-)
G85211 NA non-coding upstream 347850 19051398 ~ 19053050 (-)
G85382 NA non-coding upstream 565114 19268662 ~ 19268952 (-)
G85459 NA non-coding upstream 760604 19464152 ~ 19478394 (-)
G85460 NA non-coding upstream 761227 19464775 ~ 19467176 (-)
evx2 evx2,LOC107657379,LOC107671304 other downstream 970071 17695290 ~ 17699980 (-)
sp3a sp3 other downstream 1288879 17371979 ~ 17381172 (-)
mettl8 mettl8 other downstream 1630208 17028237 ~ 17039843 (-)
si:dkey-91i10.2 LOC108266132,LOC106530433,LOC107658202 other downstream 2263573 16370227 ~ 16406478 (-)
G83554 NA other downstream 2449185 16219964 ~ 16220866 (-)
LOC113526313 baz2b other upstream 209839 18913387 ~ 18968492 (-)
grb14 grb14 other upstream 739543 19443091 ~ 19494515 (-)
steap3 steap3,dbi,LOC107560815,LOC107747240 other upstream 865201 19568749 ~ 19586103 (-)
G85848 NA other upstream 1523180 20226728 ~ 20237615 (-)
abcb6b LOC108266852,LOC108423985,LOC107596549,LOC107750068 other upstream 1690923 20394471 ~ 20423244 (-)

Expression


Co-expression Network