ahsg1


Basic Information

Item Value
gene id ahsg1
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 17581606 ~ 17584347 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930630.2
ATCAGAGTCTTAGCCTAGACTGATTGTTGGCtcagtattaaaataattgtaataatattcCATTGAGATTATATAGTAACCACACCACTATGTGGTCCAATGGTCCATCCTCTATGCCCTCTCCAAACACTATTTGTTTTTGCCCTTGATTGATTTGGCAGCCCACATAAAACTGTTGACTCTAGGCTCTTTATTCTATAAAGCACAGAGACGGTGACCTCGTAGTCTCAGTCCCATGATTGTGACTTGACACTGAGCTCTACATTGTGCCATGAGAGAACTTTTGATTCTAGCAGTGCTGTGCCAGGGGCTGTTTGCCACCAGCTCCCCAGTCTGCAGGATTTATGCAGACAAGGCCGCTGCTGATGAAGCCGTCTACCTCATTAACAAACTACACCATCATGGATACAAGTTCAAACTGGACAGCTTCACACTGGACAAGAGTCTTCCAGGACAGCCTTTATGTCTAACTCAATTGACCTTAACGTTAAGTGAGACCAACTGCCATATTGTGAACCCCAAGCCTTTTGATGAATGCGAGGTCAGGAAGGAAGCTGACACGCCAGTAACAGCAAAATGCAACGTCTCTTTGTGTGATGGTGGAGAAAAACCAGGCATTGCACGTTTAGTCTGCGATACTGAGCCAGCTTCAAGTGAAGAACTAGTACGCAGGTGCCCTGATTGCCCGACTCTTCTGCCTTTGCATGATCCTGAGGGCTTGGAGAGTGTAAAAGCTGCCATTGAGAAGTTCAACAAGGATTCCACCCAGACCTCCTACTTTAAGCTATTGGAAGTTGGTAGACTGAGGACCCAGTATAACATGGCATTTGGAATGTCCCACTTTGCTGAGTTTGCCATAGTAGAGACTGAGTGTCCAGTCAGTGTGAAAAACGAAGAAAAACCTGCTTGCAAGCCAAAATGCTCGAATGAAACTCATCATGGATTCTGTAAATCCACGCAACTTGGAAATGGTGACTTGACTGTAGACTGTGAGATTTATGACATCCAGaacacaacacagcacCCACATCCTCCATTCCACCGGGGAAAGCACTGTAGACACCATGAAAGACACCGTCCAGGGCACCATGAGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCAAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGAACGAGGAGAACATGAAACCCGTCCAGGACGTCCCACACGTCCTGGTCAGCCTGACCTTCCAGAGCATGCCCCCATCGGTCCAGGAGGCCATCCATTCTGTTTTACTCGTACACTTAGAGGTCCTTTCCATAGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCACCTCCTCATGGAGGCCCTCCTCCTCATGGAGGCCCTCCTCATCATGGAGACGATGACCATAAGAAACCTCACCCTAAGCTCACTCAACCACCACAGCAAGGGGTGCCCGCCGGTCAACCTATCCCTCCAGGATCTGAGGAACGCCTAGATTTCTCTTTCCCACATTGCCATGGTGCTGTGAAAATaccaccatccatccatcctatcTGCCCATTCCCTCCTTCATTCCACAGGAGGGGTCATCATTAAAACTGAACTTTGCAAGAGATTTTCTTTCATACAATCTGAACtagaaatgttaaacaaaacttaaatttaataaaatgaagcTTCTGGTTTACATTATGCTACAAGTGGTTTTGTTAAACAACTGAAATGGCATATGCAATAAACCTCCTATATTACCATCTAA
>XM_026930640.2
ATCAGAGTCTTAGCCTAGACTGATTGTTGGCtcagtattaaaataattgtaataatattcCATTGAGATTATATAGTAACCACACCACTATGTGGTCCAATGGTCCATCCTCTATGCCCTCTCCAAACACTATTTGTTTTTGCCCTTGATTGATTTGGCAGCCCACATAAAACTGTTGACTCTAGGCTCTTTATTCTATAAAGCACAGAGACGGTGACCTCGTAGTCTCAGTCCCATGATTGTGACTTGACACTGAGCTCTACATTGTGCCATGAGAGAACTTTTGATTCTAGCAGTGCTGTGCCAGGGGCTGTTTGCCACCAGCTCCCCAGTCTGCAGGATTTATGCAGACAAGGCCGCTGCTGATGAAGCCGTCTACCTCATTAACAAACTACACCATCATGGATACAAGTTCAAACTGGACAGCTTCACACTGGACAAGAGTCTTCCAGGACAGCCTTTATGTCTAACTCAATTGACCTTAACGTTAAGTGAGACCAACTGCCATATTGTGAACCCCAAGCCTTTTGATGAATGCGAGGTCAGGAAGGAAGCTGACACGCCAGTAACAGCAAAATGCAACGTCTCTTTGTGTGATGGTGGAGAAAAACCAGGCATTGCACGTTTAGTCTGCGATACTGAGCCAGCTTCAAGTGAAGAACTAGTACGCAGGTGCCCTGATTGCCCGACTCTTCTGCCTTTGCATGATCCTGAGGGCTTGGAGAGTGTAAAAGCTGCCATTGAGAAGTTCAACAAGGATTCCACCCAGACCTCCTACTTTAAGCTATTGGAAGTTGGTAGACTGAGGACCCAGTATAACATGGCATTTGGAATGTCCCACTTTGCTGAGTTTGCCATAGTAGAGACTGAGTGTCCAGTCAGTGTGAAAAACGAAGAAAAACCTGCTTGCAAGCCAAAATGCTCGAATGAAACTCATCATGGATTCTGTAAATCCACGCAACTTGGAAATGGTGACTTGACTGTAGACTGTGAGATTTATGACATCCAGaacacaacacagcacCCACATCCTCCATTCCACCGGGGAAAGCACTGTAGACACCATGAAAGACACCGTCCAGGGCACCATGAGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCAAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGAACGAGGAGAACATGAAACCCGTCCAGGACGTCCCACACGTCCTGGTCAGCCTGACCTTCCAGAGCATGCCCCCATCGGTCCAGGAGGCCATCCATTCTGTTTTACTCGTACACTTAGAGGTCCTTTCCATAGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCACCTCCTCATGGAGGCCCTCCTCCTCATGGAGGCCCTCCTCATCATGGAGACGATGACCATAAGAAACCTCACCCTAAGCTCACTCAACCACCACAGCAAGGGGTGCCCGCCGGTCAACCTATCCCTCCAGGATCTGAGGAACGCCTAGATTTCTCTTTCCCACATTGCCATGGTGCTGTGAAAATaccaccatccatccatcctatcTGCCCATTCCCTCCTTCATTCCACAGGAGGGGTCATCATTAAAACTGAACTTTGCAAGAGATTTTCTTTCATACAATCTGAACtagaaatgttaaacaaaacttaaatttaataaaatgaagcTTCTGGTTTACATTATGCTACAAGTGGTTTTGTTAAACAACTGAAATGGCATATGCAATAAACCTCCTATATTACCATCTAA
>XM_026930648.2
TCTAGATCAGAGTCTTAGCCTAGACTGATTGTTGGCtcagtattaaaataattgtaataatattcCATTGAGATTATATAGTAACCACACCACTATGTGGTCCAATGGTCCATCCTCTATGCCCTCTCCAAACACTATTTGTTTTTGCCCTTGATTGATTTGGCAGCCCACATAAAACTGTTGACTCTAGGCTCTTTATTCTATAAAGCACAGAGACGGTGACCTCGTAGTCTCAGTCCCATGATTGTGACTTGACACTGAGCTCTACATTGTGCCATGAGAGAACTTTTGATTCTAGCAGTGCTGTGCCAGGGGCTGTTTGCCACCAGCTCCCCAGTCTGCAGGATTTATGCAGACAAGGCCGCTGCTGATGAAGCCGTCTACCTCATTAACAAACTACACCATCATGGATACAAGTTCAAACTGGACAGCTTCACACTGGACAAGAGTCTTCCAGGACAGCCTTTATGTCTAACTCAATTGACCTTAACGTTAAGTGAGACCAACTGCCATATTGTGAACCCCAAGCCTTTTGATGAATGCGAGGTCAGGAAGGAAGCTGACACGCCAGTAACAGCAAAATGCAACGTCTCTTTGTGTGATGGTGGAGAAAAACCAGGCATTGCACGTTTAGTCTGCGATACTGAGCCAGCTTCAAGTGAAGAACTAGTACGCAGGTGCCCTGATTGCCCGACTCTTCTGCCTTTGCATGATCCTGAGGGCTTGGAGAGTGTAAAAGCTGCCATTGAGAAGTTCAACAAGGATTCCACCCAGACCTCCTACTTTAAGCTATTGGAAGTTGGTAGACTGAGGACCCAGTATAACATGGCATTTGGAATGTCCCACTTTGCTGAGTTTGCCATAGTAGAGACTGAGTGTCCAGTCAGTGTGAAAAACGAAGAAAAACCTGCTTGCAAGCCAAAATGCTCGAATGAAACTCATCATGGATTCTGTAAATCCACGCAACTTGGAAATGGTGACTTGACTGTAGACTGTGAGATTTATGACATCCAGaacacaacacagcacCCACATCCTCCATTCCACCGGGGAAAGCACTGTAGACACCATGAAAGACACCGTCCAGGGCACCATGAGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCAAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGAACGAGGAGAACATGAAACCCGTCCAGGACGTCCCACACGTCCTGGTCAGCCTGACCTTCCAGAGCATGCCCCCATCGGTCCAGGAGGCCATCCATTCTGTTTTACTCGTACACTTAGAGGTCCTTTCCATAGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCACCTCCTCATGGAGGCCCTCCTCCTCATGGAGGCCCTCCTCATCATGGAGACGATGACCATAAGAAACCTCACCCTAAGCTCACTCAACCACCACAGCAAGGGGTGCCCGCCGGTCAACCTATCCCTCCAGGATCTGAGGAACGCCTAGATTTCTCTTTCCCACATTGCCATGGTGCTGTGAAAATaccaccatccatccatcctatcTGCCCATTCCCTCCTTCATTCCACAGGAGGGGTCATCATTAAAACTGAACTTTGCAAGAGATTTTCTTTCATACAATCTGAACtagaaatgttaaacaaaacttaaatttaataaaatgaagcTTCTGGTTTACATTATGCTACAAGTGGTTTTGTTAAACAACTGAAATGGCATATGCAATAAACCTCCTATATTACCATCTAA
>XM_034308984.1
AATCTAGATCAGAGTCTTAGCCTAGACTGATTGTTGGCtcagtattaaaataattgtaataatattcCATTGAGATTATATAGTAACCACACCACTATGTGGTCCAATGGTCCATCCTCTATGCCCTCTCCAAACACTATTTGTTTTTGCCCTTGATTGATTTGGCAGCCCACATAAAACTGTTGACTCTAGGCTCTTTATTCTATAAAGCACAGAGACGGTGACCTCGTAGTCTCAGTCCCATGATTGTGACTTGACACTGAGCTCTACATTGTGCCATGAGAGAACTTTTGATTCTAGCAGTGCTGTGCCAGGGGCTGTTTGCCACCAGCTCCCCAGTCTGCAGGATTTATGCAGACAAGGCCGCTGCTGATGAAGCCGTCTACCTCATTAACAAACTACACCATCATGGATACAAGTTCAAACTGGACAGCTTCACACTGGACAAGAGTCTTCCAGGACAGCCTTTATGTCTAACTCAATTGACCTTAACGTTAAGTGAGACCAACTGCCATATTGTGAACCCCAAGCCTTTTGATGAATGCGAGGTCAGGAAGGAAGCTGACACGCCAGTAACAGCAAAATGCAACGTCTCTTTGTGTGATGGTGGAGAAAAACCAGGCATTGCACGTTTAGTCTGCGATACTGAGCCAGCTTCAAGTGAAGAACTAGTACGCAGGTGCCCTGATTGCCCGACTCTTCTGCCTTTGCATGATCCTGAGGGCTTGGAGAGTGTAAAAGCTGCCATTGAGAAGTTCAACAAGGATTCCACCCAGACCTCCTACTTTAAGCTATTGGAAGTTGGTAGACTGAGGACCCAGTATAACATGGCATTTGGAATGTCCCACTTTGCTGAGTTTGCCATAGTAGAGACTGAGTGTCCAGTCAGTGTGAAAAACGAAGAAAAACCTGCTTGCAAGCCAAAATGCTCGAATGAAACTCATCATGGATTCTGTAAATCCACGCAACTTGGAAATGGTGACTTGACTGTAGACTGTGAGATTTATGACATCCAGaacacaacacagcacCCACATCCTCCATTCCACCGGGGAAAGCACTGTAGACACCATGAAAGACACCGTCCAGGGCACCATGAGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCAAGGAGAACATGAAAGTAAGCCGGGGCACCATGGGCGAGGAGAACATGAAAGTAAGCCGGGGCACCATGAACGAGGAGAACATGAAACCCGTCCAGGACGTCCCACACGTCCTGGTCAGCCTGACCTTCCAGAGCATGCCCCCATCGGTCCAGGAGGCCATCCATTCTGTTTTACTCGTACACTTAGAGGTCCTTTCCATAGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCTCCTCCTCATGGAGGTCCTCCTCATCATGGAGGCCCACCTCCTCATGGAGGCCCTCCTCCTCATGGAGGCCCTCCTCATCATGGAGACGATGACCATAAGAAACCTCACCCTAAGCTCACTCAACCACCACAGCAAGGGGTGCCCGCCGGTCAACCTATCCCTCCAGGATCTGAGGAACGCCTAGATTTCTCTTTCCCACATTGCCATGGTGCTGTGAAAATaccaccatccatccatcctatcTGCCCATTCCCTCCTTCATTCCACAGGAGGGGTCATCATTAAAACTGAACTTTGCAAGAGATTTTCTTTCATACAATCTGAACtagaaatgttaaacaaaacttaaatttaataaaatgaagcTTCTGGTTTACATTATGCTACAAGTGGTTTTGTTAAACAACTGAAATGGCATATGCAATAAACCTCCTATATTACCATCTAA

Function

NR:

description
PREDICTED: histidine-rich glycoprotein-like

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930630.2 True 1985 mRNA 0.48 7 17581606 17584340
XM_026930640.2 False 1949 mRNA 0.48 8 17581606 17584340
XM_026930648.2 False 1954 mRNA 0.48 8 17581606 17584345
XM_034308984.1 False 1884 mRNA 0.47 8 17581606 17584347

Neighbor

gene id symbol gene type direction distance location
fetub LOC108270510 coding downstream 1469 17577741 ~ 17580137 (-)
si:ch211-284e20.8 LOC108270536 coding downstream 5526 17573187 ~ 17576080 (-)
hps3 hps3 coding downstream 13055 17547896 ~ 17568551 (-)
tm4sf4 tm4sf4 coding downstream 74563 17504592 ~ 17507043 (-)
pex6 pex6,LOC104944420,LOC107662915 coding downstream 144864 17423327 ~ 17436742 (-)
si:ch211-262h13.5 LOC108271434 coding upstream 771 17585118 ~ 17595003 (-)
ncbp2 ncbp2 coding upstream 61041 17645388 ~ 17648708 (-)
b3gnt5a b3g5a,LOC108439423 coding upstream 129970 17714317 ~ 17718631 (-)
LOC113527193 NA coding upstream 214333 17798680 ~ 17851159 (-)
tbl1xr1a tbl1xr1,tbl1xr1a,LOC107600277,LOC107718892,LOC106584305,LOC107557783 coding upstream 970108 18554455 ~ 18615864 (-)
G183408 NA non-coding downstream 34126 17546459 ~ 17547480 (-)
LOC117598411 wwtr1 non-coding downstream 125998 17454062 ~ 17455608 (-)
G183400 NA non-coding downstream 128143 17453218 ~ 17453463 (-)
G183399 NA non-coding downstream 128497 17452870 ~ 17453109 (-)
G183385 NA non-coding downstream 174184 17406976 ~ 17407422 (-)
G183558 NA non-coding upstream 281160 17865507 ~ 17865746 (-)
G183809 NA non-coding upstream 294858 17879205 ~ 17879409 (-)
G183826 NA non-coding upstream 313799 17898146 ~ 17898353 (-)
LOC113530379 NA non-coding upstream 1355755 18940102 ~ 18948626 (-)
G184255 NA non-coding upstream 1374902 18959249 ~ 18960854 (-)
traf5 LOC108271110,LOC108411952 other downstream 229237 17342815 ~ 17352369 (-)
zgc:172076 LOC108271265,LOC108411951 other downstream 239352 17245772 ~ 17342254 (-)
micos13 c10h19orf70,cunh19orf70 other downstream 1302749 16274882 ~ 16278857 (-)
G182210 NA other downstream 1889256 15690774 ~ 15692350 (-)
lama3 LOC108270685 other downstream 3001859 14550906 ~ 14579747 (-)
trnav-uac_6 NA other upstream 1731772 19316119 ~ 19316374 (-)
G184716 rps15,LOC107685215,LOC107578086 other upstream 2110915 19695262 ~ 19697709 (-)
dda1 dda1,LOC107685208,LOC105913185,LOC105939318 other upstream 2121735 19706082 ~ 19712597 (-)
elavl1b LOC108270814,LOC108437281,LOC103034406,LOC105889513 other upstream 2598695 20183042 ~ 20192143 (-)
mob3c mob3c,LOC108270829,LOC103027889,LOC108438648,LOC106613547,LOC106574029,LOC107572948 other upstream 3338948 20923295 ~ 20929955 (-)

Expression


Co-expression Network