suox (suox)


Basic Information

Item Value
gene id suox
gene name suox
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047614.1
NCBI id CM018560.1
chromosome length 21552800
location 12434509 ~ 12454321 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932874.2
GTCTTACTACGACATCAGATGCTTTTGGTGGTGATTGGAGGTCTGGCAGCTGGTCCTCGCGCTCGGTGTGAAATAGCAACCGTCAGGGAGAAGAACAGCAGTGAGCTCACTTCAGTTTAAACAGTCTAGGACTCCTACATCACGGctCACCAGTGCAATGCAGCACCTCAGACACTGCAAAAGTTTTGCCCATGTTTCATTTCTCATTGTGCCAAGGCAGCTGAAGAGCCCCATCCCTGCAGTATCTGTGTGGTCAGGATTTCGTGCTCTGCATTCGAGGAGCAGTAGCCAAGATCAGCACTATTCCAGATTCAGAGGATCAAGGTTCAGATACGCATTAACTGGCCTGGTAGCTGGAACTGGAGCTGTACTGGCTTATGGACTCCATCACAATAAGGCCGAGCAAGCTGCAATTCCAGTGACTCAGACGAACTCCCTACCAGTTTACAGCCAGGAAGAAGTTACAAAACATTGCGCCGTTGAAAAGGGTATATGGGTCACTTACAAAGGAAGCGTCTATGATGTTACTGACTTTGTGGCCATCCATCCTGGTGGTGACAAAATCCTTCTAGCCGCGGGTAAGGCTCTAGAACCCTTTTGGGCACTTTATGCCGTTCATGAACAAGAGCATGTTCTGGAAATTCTGTCTAAGTATAAAGTTGGCATTCTTCGAGCAGAAGTCGGCAAGAAGGAGGACATTAAATCTGCAGATCCTTATTCTACTGACCCTGCTCGTCATCCTGCTCTCAGAGTGAACAGTTTAAAACCCTTTAATGCTGAATCACCGCCTGCCATTCTTACTGATAGTTATATCACCCCTTCTGCCATCTTTTTCAAGCGAAACCACCTTCCTGTTCCCCGTGTGGATCCTAAAACATACAGGCTGAAAATTGAGGGTCTTCCTGGAGGTACTGTGTCTCTGAGTTTGGACGATCTTAAGTCTCATTTTCCTAAACATACAGTAATGGCAACCCTCCAGTGTGCTGGGAACCGTCGTTCTGAGATGGACAAAGTGAAGCAGGTCAAAGGTCTAAACTGGGGAATTGCGGCAATCAGTAATGGTACATGGTCCGGTGCTTATCTGAGAGATGTCCTGTACCATTACGGCTTTGGTCCAGAGGTGGCAGCTAAAGCACGGCATGTACAGTTTGAAGGTTTAGACATGGATGTGACGGGTACAGCATATGGAGCGTCAATCCCATTAAGCAAGGCCATGAGTGAAGAGGGAGATGTCCTGTTAGCATACGAAATGAATGGAGAGGATCTCCCGGCAGATCATGGCTTCCCGGTCCGTGTCATTGTTCCTGGAGTTGTTGGAGCCCGAAATGTCAAATGGCTCGGCAAGATAGTCATCAGCGAAGAGGAAAGCCAGAGTCACTGGCAGCAGAATGACTACAAAGGCTTTTCACCAGGCACTGATTGGGACACAGTGGACTTTAAATCAGCTCCTGCCATCCAGGAGCTTCCTGTTCAGTCAGCCATCACAAATCTGGCAGATGGTTCCTCAATAGACCGAGACATGGAGGAAGTGACTGTTAAAGGTTATGCCTGGAGCGGTGGAGGAAGGGAGGTGATGAGGGTCGACGTCTCGTTGGATGGAGGGAAGACATGGCACGTGGCCAAACTTCAGAATAGCGAGGAAGGAGAAACTTCTGCACCTTCTCCTCCATTTGGTCGAGCTTGGGCCTGGAAACTTTGGGAAATAACAGTTCCATTACCAGATGGAGCTGAGGAGCTGGAGGTTGTTTGCAAAGCAGTCGACAGTAGTTACAATACCCAACCAGACTCTGTGCCGCCTATTTGGAACTTGAGAGGGGTTCTTTGCAATGCTTGGCATCGAGTCAGGGTGAAAGTAATATGAGGGTTTGGATGAAAACCAGAAGAAGTGAAACTTTACTCAGGAAAACAAATTTGTTATACTTTATATGCCTCCAAGTGTTTAGGTGTTGACAGcttcaaatgtttatttagcctACAGTATAGCATCATACAATGAACTAGCATCATACAGTATTAGCATCATACAATGAACAGGCCACAAAACTGGatgagattttattttgtttacaaccTACATTACAATCACTATCCACAATGGGAAATCCTATTTGCTTCACTTCTTGCCTTGTTTTTCAGTTATCTTtgccaattattattattatatttgtctGTACATTTGGGGCTTTTGTACAGAACTGTAGTTCCCATAGACTCTCACATAACTATACGCACAAAAATGTTCCATAATGTAATTTTCATTGTAACAGGTATTTCATTCAGTAGAAGCAGACTGGATTTGCTTAAATAATGAGTTGATACTCAACAGCTGTGGTCCTGTGCTAATGACAGGAAGGTTGTAAATTCAAGTCCCAACACTGCCAAATAGCTACTGTTGGGCTTTTAGCATCACTTCTAAATCACCTAATGTGTCtgccaaataaaaaatgtaacatcaAGTGAAATTGGCTATCTTTGCagaatgtggaaataaatgttgtttgGCACATGACTAAAGTGA
>XM_026932875.2
AGCGTCTTACTACGACATCAGATGCTTTTGGTGGTGATTGGAGGTCTGGCAGCTGGTCCTCGCGCTCGGTGTGAAATAGCAACCGTCAGGGAGAAGAACAGCAGTGAGCTCACTTCAGTTTAAACAGTCTAGGACTCCTACATCACGGGCAGCAAGCTGTGGCTGTGTGTACACTGGgtactgtactgtatagtgTGCTCAGATAGTGCTCACTCTGAGGTCTCGGGGCTCCGTGGTGACGTCCATACTGCACACTAGCGTACTAAAGActCACCAGTGCAATGCAGCACCTCAGACACTGCAAAAGTTTTGCCCATGTTTCATTTCTCATTGTGCCAAGGCAGCTGAAGAGCCCCATCCCTGCAGTATCTGTGTGGTCAGGATTTCGTGCTCTGCATTCGAGGAGCAGTAGCCAAGATCAGCACTATTCCAGATTCAGAGGATCAAGGTTCAGATACGCATTAACTGGCCTGGTAGCTGGAACTGGAGCTGTACTGGCTTATGGACTCCATCACAATAAGGCCGAGCAAGCTGCAATTCCAGTGACTCAGACGAACTCCCTACCAGTTTACAGCCAGGAAGAAGTTACAAAACATTGCGCCGTTGAAAAGGGTATATGGGTCACTTACAAAGGAAGCGTCTATGATGTTACTGACTTTGTGGCCATCCATCCTGGTGGTGACAAAATCCTTCTAGCCGCGGGTAAGGCTCTAGAACCCTTTTGGGCACTTTATGCCGTTCATGAACAAGAGCATGTTCTGGAAATTCTGTCTAAGTATAAAGTTGGCATTCTTCGAGCAGAAGTCGGCAAGAAGGAGGACATTAAATCTGCAGATCCTTATTCTACTGACCCTGCTCGTCATCCTGCTCTCAGAGTGAACAGTTTAAAACCCTTTAATGCTGAATCACCGCCTGCCATTCTTACTGATAGTTATATCACCCCTTCTGCCATCTTTTTCAAGCGAAACCACCTTCCTGTTCCCCGTGTGGATCCTAAAACATACAGGCTGAAAATTGAGGGTCTTCCTGGAGGTACTGTGTCTCTGAGTTTGGACGATCTTAAGTCTCATTTTCCTAAACATACAGTAATGGCAACCCTCCAGTGTGCTGGGAACCGTCGTTCTGAGATGGACAAAGTGAAGCAGGTCAAAGGTCTAAACTGGGGAATTGCGGCAATCAGTAATGGTACATGGTCCGGTGCTTATCTGAGAGATGTCCTGTACCATTACGGCTTTGGTCCAGAGGTGGCAGCTAAAGCACGGCATGTACAGTTTGAAGGTTTAGACATGGATGTGACGGGTACAGCATATGGAGCGTCAATCCCATTAAGCAAGGCCATGAGTGAAGAGGGAGATGTCCTGTTAGCATACGAAATGAATGGAGAGGATCTCCCGGCAGATCATGGCTTCCCGGTCCGTGTCATTGTTCCTGGAGTTGTTGGAGCCCGAAATGTCAAATGGCTCGGCAAGATAGTCATCAGCGAAGAGGAAAGCCAGAGTCACTGGCAGCAGAATGACTACAAAGGCTTTTCACCAGGCACTGATTGGGACACAGTGGACTTTAAATCAGCTCCTGCCATCCAGGAGCTTCCTGTTCAGTCAGCCATCACAAATCTGGCAGATGGTTCCTCAATAGACCGAGACATGGAGGAAGTGACTGTTAAAGGTTATGCCTGGAGCGGTGGAGGAAGGGAGGTGATGAGGGTCGACGTCTCGTTGGATGGAGGGAAGACATGGCACGTGGCCAAACTTCAGAATAGCGAGGAAGGAGAAACTTCTGCACCTTCTCCTCCATTTGGTCGAGCTTGGGCCTGGAAACTTTGGGAAATAACAGTTCCATTACCAGATGGAGCTGAGGAGCTGGAGGTTGTTTGCAAAGCAGTCGACAGTAGTTACAATACCCAACCAGACTCTGTGCCGCCTATTTGGAACTTGAGAGGGGTTCTTTGCAATGCTTGGCATCGAGTCAGGGTGAAAGTAATATGAGGGTTTGGATGAAAACCAGAAGAAGTGAAACTTTACTCAGGAAAACAAATTTGTTATACTTTATATGCCTCCAAGTGTTTAGGTGTTGACAGcttcaaatgtttatttagcctACAGTATAGCATCATACAATGAACTAGCATCATACAGTATTAGCATCATACAATGAACAGGCCACAAAACTGGatgagattttattttgtttacaaccTACATTACAATCACTATCCACAATGGGAAATCCTATTTGCTTCACTTCTTGCCTTGTTTTTCAGTTATCTTtgccaattattattattatatttgtctGTACATTTGGGGCTTTTGTACAGAACTGTAGTTCCCATAGACTCTCACATAACTATACGCACAAAAATGTTCCATAATGTAATTTTCATTGTAACAGGTATTTCATTCAGTAGAAGCAGACTGGATTTGCTTAAATAATGAGTTGATACTCAACAGCTGTGGTCCTGTGCTAATGACAGGAAGGTTGTAAATTCAAGTCCCAACACTGCCAAATAGCTACTGTTGGGCTTTTAGCATCACTTCTAAATCACCTAATGTGTCtgccaaataaaaaatgtaacatcaAGTGAAATTGGCTATCTTTGCagaatgtggaaataaatgttgtttgGCACATGACTAAAGTGA

Function

symbol description
suox Predicted to enable heme binding activity; molybdopterin cofactor binding activity; and sulfite oxidase activity. Predicted to be involved in sulfur compound metabolic process. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in inherited metabolic disorder and isolated sulfite oxidase deficiency. Orthologous to human SUOX (sulfite oxidase).

NR:

description
sulfite oxidase, mitochondrial isoform X1

GO: NA

KEGG:

id description
K00387 SUOX; sulfite oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932874.2 False 2518 mRNA 0.45 4 12434512 12454321
XM_026932875.2 True 2642 mRNA 0.45 5 12434509 12454321

Neighbor

gene id symbol gene type direction distance location
mcrs1 mcrs1,LOC107696040 coding upstream 7476 12417610 ~ 12427033 (+)
ephb2b ephb2b,LOC108255231,LOC108439490,LOC107727812,LOC107568432,LOC107691322,LOC101487531,LOC107685632,LOC102295218,LOC100712288 coding upstream 21414 12265705 ~ 12413095 (+)
nmur3 LOC108281099,LOC108439501 coding upstream 249365 12177090 ~ 12185144 (+)
alpl alpl,LOC107691326,LOC107685635 coding upstream 337753 12067624 ~ 12096756 (+)
barx1 barx1,LOC107727794,LOC107685643,LOC107691398 coding upstream 637075 11794011 ~ 11797434 (+)
prph prph coding downstream 19735 12474056 ~ 12485975 (+)
timeless timeless,LOC107689440 coding downstream 41988 12496309 ~ 12527278 (+)
LOC113538096 LOC108255238,LOC108431540,LOC105912282,LOC106565442 coding downstream 78915 12533236 ~ 12562741 (+)
pmela pmel coding downstream 130804 12585125 ~ 12595797 (+)
cdk2 cdk2,LOC107570445,LOC107683630 coding downstream 144748 12599069 ~ 12606053 (+)
G306470 NA non-coding upstream 138780 12295369 ~ 12295729 (+)
G306452 NA non-coding upstream 144752 12284951 ~ 12289757 (+)
G306433 NA non-coding upstream 279959 12154295 ~ 12154550 (+)
G306432 NA non-coding upstream 282340 12143548 ~ 12152169 (+)
G306300 NA non-coding upstream 492216 11942035 ~ 11942293 (+)
G306503 NA non-coding downstream 118101 12572422 ~ 12573759 (+)
G306744 NA non-coding downstream 343427 12797748 ~ 12797982 (+)
G306756 NA non-coding downstream 449887 12904208 ~ 12904841 (+)
G306938 vgll4,vgll4b,LOC107750033,LOC107697562 non-coding downstream 742154 13196475 ~ 13283007 (+)
G306937 NA non-coding downstream 834468 13288789 ~ 13293439 (+)
G306103 NA other upstream 918696 11515059 ~ 11515813 (+)
G305955 iqsec1 other upstream 953409 11480669 ~ 11481100 (+)
G305869 NA other upstream 1108149 11325604 ~ 11326360 (+)
G305863 iqsec1,iqsec1b other upstream 1119073 11314184 ~ 11315436 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 1212969 11214752 ~ 11221540 (+)
G306480 tuba1c,LOC103148207,LOC106920718,LOC102311436,LOC101065103 other downstream 3280 12457601 ~ 12462536 (+)
ippk ippk,LOC107755999,LOC106566243 other downstream 1220033 13674354 ~ 13692912 (+)
asic1b asic1,asic1b,LOC107721241,LOC107569540 other downstream 1725462 14179783 ~ 14476817 (+)
gpd1b gpd1,gpd1b,LOC107698578,LOC107727040,LOC107721242,LOC107694423 other downstream 2060271 14514592 ~ 14524976 (+)
dag1 dag1,LOC107757307,LOC107592827,LOC108415278,LOC108415277 other downstream 3302569 15756890 ~ 15799890 (+)

Expression


Co-expression Network