G314367


Basic Information

Item Value
gene id G314367
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 4299761 ~ 4299965 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU372370
gggaaggaaaaagaaagtgtcAGACctcagtgaaagagagaagagagcacagagaaagaaatggcgagaaaggaagagaaagcaGAGGGCTAGTGCCAGAGCCAGGACAAACTTTCAGATAGGGAACACTCCGCCTCCAAGTCCAGACAATCCCCCTGAACCAGACAATGGCCCACAACCAGGGCCCTCAAGGCCAAGTCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU372370 True 205 lncRNA 0.51 1 4299761 4299965

Neighbor

gene id symbol gene type direction distance location
neu4 LOC108280893 coding downstream 1840 4291737 ~ 4297921 (-)
aadac LOC108280253 coding downstream 103953 4184692 ~ 4195808 (-)
LOC113543058 mbnl1,LOC108280598,LOC108424044,LOC105895776 coding downstream 186544 3996500 ~ 4113217 (-)
pcsk7 pcsk7 coding downstream 310935 3969437 ~ 3988826 (-)
LOC113543244 LOC108280394,LOC108424041,LOC105896151,LOC106580380,LOC105019165 coding downstream 349192 3925936 ~ 3950569 (-)
srprb srprb coding upstream 8090 4308055 ~ 4313132 (-)
LOC113543162 mlrb,LOC108424014,LOC103022780,LOC108413922,LOC108276823,LOC107734439,LOC107577538 coding upstream 52379 4352344 ~ 4359067 (-)
dnajc30b NA coding upstream 279156 4579121 ~ 4582598 (-)
LOC113543064 crgm2,LOC108280851,LOC108280850,LOC108258879,LOC108259744,LOC108260581,LOC108259787,LOC108260584,LOC108260664 coding upstream 327113 4627078 ~ 4628520 (-)
LOC113543065 crgm2,LOC108280851,LOC108280850,LOC108259744,LOC108260578,LOC108260584,LOC108260581,LOC108259787,LOC108260664,LOC108260582 coding upstream 331782 4631747 ~ 4632616 (-)
G314359 LOC108280160,LOC108424050 non-coding downstream 22814 4274372 ~ 4276947 (-)
G314317 NA non-coding downstream 127670 4171873 ~ 4172091 (-)
G314202 NA non-coding downstream 309351 3884704 ~ 3990410 (-)
G314203 NA non-coding downstream 331302 3962767 ~ 3968459 (-)
G314196 NA non-coding downstream 478139 3820363 ~ 3821622 (-)
G314449 NA non-coding upstream 77225 4377190 ~ 4390207 (-)
G314462 NA non-coding upstream 118969 4418934 ~ 4427134 (-)
G314483 NA non-coding upstream 170314 4470279 ~ 4471851 (-)
G314503 NA non-coding upstream 212053 4512018 ~ 4577332 (-)
G314458 NA non-coding upstream 217610 4517575 ~ 4526753 (-)
G313817 sall3,LOC108435487 other downstream 984669 3313304 ~ 3315092 (-)
zbtb47a zbtb47b,znf652,LOC108280763 other downstream 1411091 2878484 ~ 2888670 (-)
fbxl7 fbxl7,LOC108280577,LOC107718179,LOC107689422,LOC107688519 other downstream 1587596 2669218 ~ 2712165 (-)
G313307 dsel,LOC108432253 other downstream 1975195 2319769 ~ 2324566 (-)
dlgap1a dlgap1,dlgap1a,LOC107584464,LOC107751362 other downstream 2954184 1272541 ~ 1345577 (-)
fbxl4 fbxl4 other upstream 500515 4800480 ~ 4817171 (-)
LOC113543250 znf236 other upstream 663100 4963065 ~ 4996005 (-)
trnat-agu_14 NA other upstream 920496 5220461 ~ 5220534 (-)
trnat-agu_15 NA other upstream 920978 5220943 ~ 5221016 (-)
trnat-agu_16 NA other upstream 921797 5221762 ~ 5221835 (-)

Expression


Co-expression Network