dnajc30b


Basic Information

Item Value
gene id dnajc30b
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 4579121 ~ 4582598 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026940949.2
gtctctctctaccgGATGTTGACATTCCGGTCAGTAATGGCGGAGGTCAGTGGGAAAGTGGGAGCCGGTGTATACAAACTTTGTCCTTTTAAAACAAACTGTGCCTTTTTAATAACCAGTCGTCCTCATGTTGGCGTTTCTGGGGCATGTTTTAGTCTGAGGATACTCGAGAAAAATAATGAGGAAGCTCATCACACCGGAAAGCAGATCCTCAGGACTTACAGCACTCTCCTCCTGCGGTGTCCTGCAGCTCTGATCATCAGCcggtctcacagctccagcaaAAACTCTTCACTTCACACGAGTAAATCGGCGTATTACGACATTCTGCGGGTATCCCCGAACGCCACGCAGGCGCAGATCAAGACGGCGTACTACCGCCAGAGCTTCCGCTACCATCCGGACCGGAACGCGGGCAGCGATGAAGCCGTGCGCCGGTTCTCCGAGATCAGTGAAGCCTACATGGTGCTGGGGAGCGTCAGCCTCAGGAGGAAGTATGATCGCGGTGTTCTGAGCTTGGCGGACGTCCAAAGCGCCGGGAGACCCTCTCGTAAAGACACGGCACATCGTCCGAGCCcggatcatcatcatcatcatcctcatcctcatcatcctcatcagcGGCGCTCCGGGACTGTCCCAGGCGCAGGAGGAAAGCCCATGTTCGACTTCGACGCTTTTTATCGAGCGCATTACGGCGAGCAGCTGGAGAGAGAGCAGATCCTGCGCCGGTGgagagagcagagaaaacagGCACAGCAAGAGGATGTCCGGAAATGGAAACTGGAAAAAGGGACTGAGATGGCTGTTGGTGCACTGCTAGCTTTAGGGGTTGTCCTTCTGTTCAGTCTGAAATCATAATACTTTCCATTCATTCACATTCTTATACCTGTGGGGTGACCAGTAGgtttacactcttagaaaaaaagagtCATCCTTAAGTTACATGATTaaactttaaaggtgcaatatatatatatttcctacTTGTACTTGTGGCCTTAACACAAGTGCATTAAAGGTACATCAGCTAAGATTACTTTTAAGTTTATCAGCTAATCTTCCAAGACACTAGTCGCAGTACGCTGTGGGGGCACGGAGgcgcctcacacctccagggttgggggtttgaatcccgtCTCCAGCCTGTGCACACGGggtttacatgttctccctgtgcttcttaggtttcctccgggtactccggtttcctcccccagtccaaagacgtgttgAAGGcttgattggcatctctaaattgtccttagtgtgtgaatgggtgtcccctgccccgagttccctgggatagtcTCCAGGCTCCTCAGCAACCCTGTGGATAAGCAGTAGGGAAAATGGCTGGATGGATAGATTGATAGATGGGCTGTTAGAGACCTGTCCATGTTCACGAAGCACCGCCCTTAGAGTGGTCCTTAGAGTGTCTATACAATGATTGACAGGAGGCACATCCTAACCCAAACAAGCAATCCAGACCAGAATTCAGTTTTCCAAACTGGTTTTCTCACCGACTTGATAAACTTTTGCTAAAGCTACAGcttaatgagtttttttttatgttttccagTGTTATTTGTACAAGCAAGGAATGAAAAAAATCGACTATTGCACCCTTTAAGTGGCTGAGAAatcctgtttggaaaactgacttctggtCCAAAATGCATTTTATCTATTAATGTGCAAATGATACAGACACTCTACTCTACAGGCCACTGCAGATCCGGGGGCAGAGCTTCGTGAACATGGTGGGAATAGGGGCATGGGCtcaaggagttaaaaaaaaatcattcaaatgtcaaattcACATACATAACTGTTAGAGACTGTATCTTGAAACAAAAATCATACATAATGCATCTTTAAGGACCATTCTTGTAccttagattttagattttagtgtTAGGAAGAACAGGAAACCAactctggtcctggagtaccccccaccccccatgtcctcacattttactgttttccctgctcttcaATTCAAGAATTCACCTGATAATCAGCTGATTAGCTGAATCAAGTGTGTTGGGAGCAGaggaaacattaaaatgttcagGACAGGGGGTACTCTCTGAGGAAAAGGATTGGGAACCTGTGCTTTACACTACATGTACCTCTCCAGGTAAAAGATGCATACTAAagtcacataaaaaaaattcaaataaacttAGAGctcaatttaataatttaataataataataaataataaacagctcaATCCTGTCATCTTGTCACGCAGAGAAAGATGAAACTGGAAATGTTTCAcacaacttgtttttttttctttaaattataaattattttaacatataaAGTTTTCTTTGGTTTGGGAAATTGTATATGATTGCTAAGGTGCATGTGTTTGCCAAATTGTCCTTCAATTTCAGCTGATTCAATTGTTTTAGAAACTTCAGGATCTGACTGTACTCATGTTTCAAACAGTTTTGCGGTTTGGTCCTTGAACGCAGCCAAACGTTTATTCTGTTTAAGCTGTGCAGTTTCCCTGGATCAAGTGGATCATCTGCTTTAAAATGCATCAGGTGctgatgttatatttattttgtctctGGAATTTTAGCTACTGTTTAACAGACTGATTTGAATATCCTGTCTAACTAAAGCTGTTCATAACTGCATCATTTGCACATTAATAGATTTATTAGAGTAATCAGCTCTAATAGTTATTTTATGATACACCATGTGTAACCTCATGACCTTTACAGCAAGAATACCTCAGGATGATGAATAAAAGCTATAGTGGCGTAAAATAagtataatgtaataaagtatgtGATTACcgtgtatgtgtatattgtACATGGTAATCacatactttattacattatacatatacagttaGTGAACTAACTAAAGGTGCGTTTGGGGTCAGTGCTAATTCCCTAGTgggtaattgtttttttatttctctaagCTAACGTTTTAGGCAGTAGTATGCTTAAATCTTAGCATTTGTTAGTGATATACCATAGAAGGTATGCTCCTATGATGAGGTCTTTGAGATCAAGCCAAGTCATGTGGCTTTTTATTGTCACTCCTCTATATAACTTGTATACATTTGAACGAAATGTCGTTTTTCCAAGAGCATGGTGCAACACCTAATAGtgcacaagactacataaagtgcaaatacacaatagTGTGAGATGTggacaagacaataaatacacagaacagaacaataaatacagttGTGGTCCTAAGTTTATATACACCTTGCATagtctgcaaaatgttaataattaaaataaaatgagtgatcataaaaattacattttgtgttttatttagtaCTACCCTGTACAAGCTATTTCACACAACAGATGTTTaaatatagtccacaagacaaaattataactgaatttacacaaatgaaccagttcaaaagtttacatatgctttatttttaatactgtgtgtgttacctggatgatt

Function

NR:

description
dnaJ homolog subfamily C member 30

GO: NA

KEGG:

id description
K19374 DNAJC30; DnaJ homolog subfamily C member 30

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026940949.2 True 3478 mRNA 0.41 1 4579121 4582598

Neighbor

gene id symbol gene type direction distance location
LOC113543162 mlrb,LOC108424014,LOC103022780,LOC108413922,LOC108276823,LOC107734439,LOC107577538 coding downstream 220054 4352344 ~ 4359067 (-)
srprb srprb coding downstream 265989 4308055 ~ 4313132 (-)
neu4 LOC108280893 coding downstream 281200 4291737 ~ 4297921 (-)
aadac LOC108280253 coding downstream 383313 4184692 ~ 4195808 (-)
LOC113543058 mbnl1,LOC108280598,LOC108424044,LOC105895776 coding downstream 465904 3996500 ~ 4113217 (-)
LOC113543064 crgm2,LOC108280851,LOC108280850,LOC108258879,LOC108259744,LOC108260581,LOC108259787,LOC108260584,LOC108260664 coding upstream 44480 4627078 ~ 4628520 (-)
LOC113543065 crgm2,LOC108280851,LOC108280850,LOC108259744,LOC108260578,LOC108260584,LOC108260581,LOC108259787,LOC108260664,LOC108260582 coding upstream 49149 4631747 ~ 4632616 (-)
LOC113543015 LOC108280884 coding upstream 123956 4706554 ~ 4712188 (-)
mms22l mms22l coding upstream 133585 4716183 ~ 4738860 (-)
faxcb faxc coding upstream 248579 4831177 ~ 4839946 (-)
G314503 NA non-coding downstream 1789 4512018 ~ 4577332 (-)
G314458 NA non-coding downstream 52368 4517575 ~ 4526753 (-)
G314483 NA non-coding downstream 107270 4470279 ~ 4471851 (-)
G314462 NA non-coding downstream 151987 4418934 ~ 4427134 (-)
G314449 NA non-coding downstream 188914 4377190 ~ 4390207 (-)
G314616 NA non-coding upstream 200953 4783551 ~ 4783771 (-)
G314617 NA non-coding upstream 204609 4787207 ~ 4787422 (-)
G314692 NA non-coding upstream 216038 4798636 ~ 4800411 (-)
G315019 NA non-coding upstream 549768 5132366 ~ 5211323 (-)
G315067 NA non-coding upstream 629075 5211673 ~ 5211906 (-)
G313817 sall3,LOC108435487 other downstream 1264029 3313304 ~ 3315092 (-)
zbtb47a zbtb47b,znf652,LOC108280763 other downstream 1690451 2878484 ~ 2888670 (-)
fbxl7 fbxl7,LOC108280577,LOC107718179,LOC107689422,LOC107688519 other downstream 1866956 2669218 ~ 2712165 (-)
G313307 dsel,LOC108432253 other downstream 2254555 2319769 ~ 2324566 (-)
dlgap1a dlgap1,dlgap1a,LOC107584464,LOC107751362 other downstream 3233544 1272541 ~ 1345577 (-)
fbxl4 fbxl4 other upstream 217882 4800480 ~ 4817171 (-)
LOC113543250 znf236 other upstream 380467 4963065 ~ 4996005 (-)
trnat-agu_14 NA other upstream 637863 5220461 ~ 5220534 (-)
trnat-agu_15 NA other upstream 638345 5220943 ~ 5221016 (-)
trnat-agu_16 NA other upstream 639164 5221762 ~ 5221835 (-)

Expression


Co-expression Network