Gene
RNA
| Item | Value |
|---|---|
| gene id | G411667 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047624.1 |
| NCBI id | CM018570.1 |
| chromosome length | 11744058 |
| location | 11313383 ~ 11313598 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488643 | True | 216 | lncRNA | 0.41 | 1 | 11313383 | 11313598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-202p1.5 | LOC108274101 | coding | upstream | 3511 | 11304065 ~ 11309872 (+) |
| ehd3 | ehd3,LOC108258807,LOC108429356,LOC107727655,LOC107675095,LOC107716590 | coding | upstream | 23182 | 11273923 ~ 11290201 (+) |
| angel2 | angel2 | coding | upstream | 42342 | 11262078 ~ 11271041 (+) |
| galnt14 | galnt14,LOC108274857,LOC108429358,LOC107676246,LOC107716567,LOC107727639 | coding | upstream | 53980 | 11236260 ~ 11259403 (+) |
| flvcr1 | flvcr1,LOC106512207 | coding | upstream | 81347 | 11224300 ~ 11232036 (+) |
| ptrhd1 | ptrhd1 | coding | downstream | 117182 | 11430780 ~ 11433538 (+) |
| LOC113528726 | NA | coding | downstream | 160077 | 11473675 ~ 11481629 (+) |
| LOC117596609 | NA | coding | downstream | 302838 | 11616436 ~ 11619152 (+) |
| G411438 | NA | non-coding | upstream | 107755 | 11204126 ~ 11205628 (+) |
| G411427 | NA | non-coding | upstream | 133977 | 11178302 ~ 11179406 (+) |
| G411423 | NA | non-coding | upstream | 145493 | 11167681 ~ 11167890 (+) |
| G411414 | NA | non-coding | upstream | 158589 | 11154579 ~ 11154794 (+) |
| G411394 | NA | non-coding | upstream | 206232 | 11087144 ~ 11107151 (+) |
| G411693 | NA | non-coding | downstream | 63458 | 11377056 ~ 11377275 (+) |
| G411729 | NA | non-coding | downstream | 85461 | 11399059 ~ 11427527 (+) |
| LOC117596530 | NA | non-coding | downstream | 108325 | 11421923 ~ 11428728 (+) |
| G411804 | NA | non-coding | downstream | 171259 | 11484857 ~ 11525675 (+) |
| G411889 | NA | non-coding | downstream | 400452 | 11714050 ~ 11714256 (+) |
| aig1 | aig1,LOC107675100,LOC107689442,LOC106607822 | other | upstream | 160378 | 11115573 ~ 11153005 (+) |
| G411297 | NA | other | upstream | 548654 | 10764214 ~ 10764729 (+) |
| armc2 | armc2 | other | upstream | 1018178 | 10235981 ~ 10295205 (+) |
| afg1lb | lace1 | other | upstream | 1082576 | 10197716 ~ 10230807 (+) |
| G410936 | snx3 | other | upstream | 1130711 | 10178049 ~ 10182672 (+) |
| txlnba | txlnb | other | downstream | 76902 | 11390500 ~ 11418204 (+) |
