AMCG00004845


Basic Information

Item Value
gene id AMCG00004845
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 5724587 ~ 5726210 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004845
GCTTAGAAGAACAACTAGTTTTTCACCAGACAAATTCGAATTTAGAAATGGACAAGAAACATTTTTCGGTCCGTGATAGACAGCGACTTCAGGAAAGTCATCAACTGTCAGAGCCGACCTTCTTCACTAAGCCAGAGACTACAGACCTCCCCAGAGTGGTGCTAGGAGACAGTTTCCCGCATTTTCACTGCTCTGACCCTCTTGTCGTCCTGAAGGCCTCCTCCCCTTGCGTCACCTTTCATGGCCCCCCGGAGTCGTTCATGAATTATTCCTATGCCCCTTCTGTTCCTAGCTTCACCCCACCTAGTTACAGGCCTGCCCAGGCTGGCAGCTGGACCCAGCCTTCTTCATTTCCATACCATAAATTCATGCAGCCTCCCAGCCTCCAGGACTGCTCAGTGGACAGGAATGATCAATGGGAGCCTATAATGACGCACAGCTCCCCACTACACAACCTGCTTCTACTGTCCCTAGAAGACACTGTTGTTCCTCGCTCCACCCCACCTAAAGTCAGCCCTGCCCCAGCTGGCAGCGGGACCCAGCCTTCTTCATTTGCATATCAGAAATACATGCAGCCTCTCAGCCTCCAGGACTGCTCAACCAAGCATGATCAATGGGAGCCTATATTGACGTGCAGCTCCCCACTTTACAAGCTGCTAATGTCCCTAGAAGATGAAGCCCCCTGTGAGGAAACCCATCCTGTTCTGCCCCAGAAGGCTAAGCCTGCTCTCCAAGAAAATGGTTCTACTGAACAAACCTTGAATGCACCAGTTGAGGACGACCCACCCTGTCATGAGCACAAAACCTCACCAGCACTGGATGAAGATTCAGTTTCTGGCAACCAAACACCAGCTGGCCTAAATCAATACTGGGCCAGTGGTAACCACTCACAAGATTCAGTGGACGAGCCTGCCTATTGTCAACAAACCCCAAGTGAACAAACCGAGGACCCTGTGTTAGGTGACAAACCACCAACTGCAGCGATTGAAGACCTGGCTTCTGCTCACAAAACTGTTGTTGTCGTAGGACAACAGAGGAGGCATTGAAAATGGGAGAAGTCTCAACTGCATACGGACAAAATCATCCAGTGACTTCAATGTCCAAGACTAAAGGGCAATCAATTCCTCTCAAAGCTTCATTTTATACCCtagattgtgttttgtgtgtctacAGTTCCttgcaataatacatttaaaaattataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004845 True 1206 mRNA 0.49 2 5724587 5726210

Neighbor

gene id symbol gene type direction distance location
AMCG00004847 NA coding upstream 16636 5657744 ~ 5707951 (+)
AMCG00004846 LOC106613881,LOC107709201 coding upstream 83874 5631156 ~ 5640713 (+)
AMCG00004839 NA coding upstream 357699 5362128 ~ 5366888 (+)
AMCG00004834 atpaf1 coding upstream 659174 5058465 ~ 5065413 (+)
AMCG00004833 NA coding upstream 666498 5003320 ~ 5058089 (+)
AMCG00004851 srsf11,LOC103035453,LOC105898987 coding downstream 4760 5730970 ~ 5740518 (+)
AMCG00004849 NA coding downstream 17721 5743931 ~ 5744335 (+)
AMCG00004850 ankrd13c coding downstream 54764 5780974 ~ 5796393 (+)
AMCG00004852 NA coding downstream 74203 5800413 ~ 5816834 (+)
AMCG00004856 NA coding downstream 590691 6316901 ~ 6330455 (+)
G143630 NA non-coding upstream 262733 5461492 ~ 5461854 (+)
G143526 NA non-coding upstream 866423 4852163 ~ 4858164 (+)
G143447 NA non-coding upstream 1472498 4251709 ~ 4252089 (+)
G143440 NA non-coding upstream 1485727 4218037 ~ 4238860 (+)
G143414 NA non-coding upstream 1590678 4133275 ~ 4133909 (+)
G143721 NA non-coding downstream 774026 6500236 ~ 6500721 (+)
G143772 NA non-coding downstream 908848 6635058 ~ 6635410 (+)
G143923 NA non-coding downstream 2147403 7873613 ~ 7874434 (+)
G143962 NA non-coding downstream 2252436 7978646 ~ 8049310 (+)
G143970 NA non-coding downstream 2283321 8009531 ~ 8012018 (+)
G143626 NA other upstream 300466 5423703 ~ 5424121 (+)
G143471 LOC107575789 other upstream 1352498 4371709 ~ 4372089 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other upstream 1614932 4109022 ~ 4109655 (+)
G143366 NA other upstream 1774750 3949426 ~ 3949837 (+)
AMCG00004793 NA other upstream 2329429 3377815 ~ 3395158 (+)
AMCG00004864 NA other downstream 1882691 7608901 ~ 7624070 (+)
AMCG00004868 samd13 other downstream 1946606 7672816 ~ 7692361 (+)
AMCG00004870 rpf1,LOC107745333 other downstream 1992063 7718273 ~ 7734059 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other downstream 3973957 9700167 ~ 9750777 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other downstream 4222200 9948410 ~ 10015424 (+)

Expression


Co-expression Network