G155496


Basic Information

Item Value
gene id G155496
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13679174 ~ 13690042 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195874
AACACATCTCCCAGAATCCCATCACTGCCTCCCTTTGGTGGCGATGGCTCCTCACCTGAGAAGGTCCCTGAGAAGACTCCAGGGGCGTGGTTGACAAAGCTCTCGATGATGGCGCCCGGTTTGCGGGAGCGTGTCGTCGGAGCTGGGCTGCTACTAGGGGTCTTGGTGCTGCAATCAGCCTGAGGGAGGGGAAAGGGGGAGAGGGCTTCCAATATgagtcacacatacacacaaaaaaaaagaatacaagaAGAAGGTCTGCTTAGGCTAGGGGTAATCCCATAAAACTTCAATACCATCATGCTTCCTGCAACGTGGCATAAGGTAGGTTTTGAGCTAAGGGTTGGTGAGGTTTCTTTCAGACGTCCTTTTTAGGGTTTGGCTCGAGTGAGCAATTGAGTTATTGGGGCTCCAGTTACAGCACATCGACACATGAGACGTCAAGTGGCACAGAGTGAAAGCAAAAGTTAAACCAGAGAGGACATCTCAAATCCTGACTGTAATGAGAGCCTTAGATTATACCAAATGGGTCAATATGAAATGAATTCTTATTTTCTGTCTGCAGGTTGTCATGTTAAGACGAGTCTTTGAAAGtgccacaaaaataaattggaacCCTGCTACTTGGCATTTTATTCCCGAGACAATATGAAATGTGATGGACTCACCTCTGAGCAGGGGACGGCGGGACTGTGGCTCTGGGGGCTGGTGCTGGTCGAGCTGGGGATGTGCGAGCGGAACAGGCCAGAGGGGAGCGGGGCGGGACGGGGCGGGGCGCTGCAGGGCGtcgtggggggtggggagtagCTGAGCGGCGCTGTTTGGTTGGCACTGGCTGCGGGGAAGGGAGTGGTGGTGGCAGGGGTGGCGCTGGCGGTGGCGGCGGGAGGGTGGGCTGCGAGGGGATGCACGTGGGGGAGGTGGGAGTGGTGCGGCGTCCTGGGAGCCGGCGACGCTGCTGGCCCTGCTGTGGCCGCCTGCCCTGCGCTCTCCGGCCCCCTGGCGATAAGGTGCcggtgctgcagctgctgccctCCCGACTGCTGGGCTGCCAACTGCAGCTGGACGAACATCATGTGGTCCCCCACGCGCAGGGCCAGGGTCAGGGGGGAGCGCCCTGACAGGAAGTCACTGACCTGCAGACTGGGTTTCTGTCAAACTCTCCAAAGCCTGCATTACGGACTGTTCGGGTCGAGATGCTTGCGACTTCATTAAGCCTGCTTCCACTGTTGGGACGAGTGTTAACTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195874 True 1250 lncRNA 0.57 3 13679174 13690042

Neighbor

gene id symbol gene type direction distance location
AMCG00005975 NA coding upstream 121024 13554980 ~ 13558150 (+)
AMCG00005974 NA coding upstream 157920 13511568 ~ 13521254 (+)
AMCG00005973 yjefn3,LOC108429551,LOC108271278,LOC103041169 coding upstream 174791 13487297 ~ 13504383 (+)
AMCG00005949 ndufa13,LOC102786334 coding upstream 211804 13464545 ~ 13467370 (+)
AMCG00005951 NA coding upstream 220987 13441867 ~ 13458187 (+)
AMCG00005968 NA coding downstream 43639 13733681 ~ 13743505 (+)
AMCG00006006 NA coding downstream 116441 13806483 ~ 13807496 (+)
AMCG00006001 LOC102201084 coding downstream 155582 13845624 ~ 13865346 (+)
AMCG00006000 matk,LOC106573821,LOC102798474 coding downstream 176011 13866053 ~ 13879407 (+)
AMCG00006002 NA coding downstream 190903 13880945 ~ 13883808 (+)
G155481 NA non-coding upstream 7140 13528354 ~ 13672034 (+)
G155479 NA non-coding upstream 46171 13549217 ~ 13633003 (+)
G155480 NA non-coding upstream 115388 13490941 ~ 13563786 (+)
G155452 slc25a42,LOC107671810,LOC101165762,LOC107552673,LOC107696381 non-coding upstream 293126 13381781 ~ 13386048 (+)
G155427 NA non-coding upstream 404516 13273607 ~ 13274658 (+)
G155530 NA non-coding downstream 32658 13722700 ~ 13722905 (+)
G155538 NA non-coding downstream 56318 13746360 ~ 13747729 (+)
G155566 LOC106511986,LOC103138501,LOC103464095,LOC101469484,LOC102302661 non-coding downstream 132767 13822809 ~ 13824780 (+)
G155635 NA non-coding downstream 399294 14089336 ~ 14092874 (+)
G155636 NA non-coding downstream 404981 14095023 ~ 14096145 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other upstream 645766 13025764 ~ 13033408 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other upstream 783722 12894120 ~ 12895452 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other upstream 964603 12711778 ~ 12714571 (+)
AMCG00005987 NA other upstream 969631 12691816 ~ 12709543 (+)
AMCG00005895 NA other upstream 1773087 11903352 ~ 11906087 (+)
G155637 eps15l1,LOC107592720 other downstream 407762 14097804 ~ 14098696 (+)
G155638 NA other downstream 418131 14108173 ~ 14109870 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other downstream 685953 14375995 ~ 14383580 (+)
AMCG00006022 NA other downstream 730340 14420382 ~ 14424746 (+)
AMCG00006034 vmac,LOC106573562 other downstream 962157 14652199 ~ 14659497 (+)

Expression


Co-expression Network