G49013


Basic Information

Item Value
gene id G49013
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 876554 ~ 879513 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU61256
ATCTGTTATTCAAATTCTGCCCCCTGATTTGGCATTCAAAACCCTCAATCGCTGTGAATCGCGCGGCCGTCTGGCGCTCAGGCCCACAGGCAggtcttcacacagagacagcGGCTCGGGATGCTTCTGCTTTATTAACCTGCACACACCATCGTAATCACAATCTGCTCGTGTGGTTCCCGTCCAGCACAGACGCAGCCGGCCGGGCGAGAGAGCTGTGGCAGCGTCGCGGTGCCGAACAGAGGCTATTATTGACGCTGATCTGAGAGGGGGAAGCAACGGTTGGCTGGAGCTCTTATTGTGGTTTGTAATATGTTCAGTGTTACTGCACGGCACGGCGGAGCTCAGCGCTGCACCGAGACGAAACTCGGCACACTTCTCACGACTCAGTCAAAACAGTTCGCTTCCTGTTTCGTGGGGGAGGTCTGCCATTGGGGTCTGAATTGAACTCGTTATAAAAACAAACCGAGAGAGAAACAGGACagccacacacaaaacaacaacaacaaaaaaaacactaaactgtCTGCTGAAGAAAGAGAGGCAAGCAGAAAAGGAATAAGGGCATCGTGGAAATATGGAGGGAAGGAACGACAGGGGAGGAGAGGCAGGAatgagggagagacagagggagagggggagagggggagggaaagggagaggttgagagagagggggagagagagagagagtcacagATGCCGTTGTGGGTGTTGGAGCTTCGGTGTCCCAGAATTCCCCCACATTCTCCAGGTCGGTTTTCCAGGAATTCCTGACTCGATTCAGCCGGGGAAtcactcctcctctccccctctctcttacTGCTTCAACTCTGGACGCTCTTAGGGCACCTCTGTGGGCCCGAGGGCAGAGTAAACGAGAGTGGCACAAAAGCCGAAGGGGTAAGCCAGCCTTAGGACGGGTCACACACAACGTGAGTGACTTTAGGCCACGCCCCCAAGGCTTGTGCATCACTTAAGGCACTTAAAACATGAGGAACGCAAACAAACGTGGATATTAAGGTCTCTGGTGTGAAGACACTTCTTTAAAAGTTATTTGATCATTAATAATTTTTGTATGAGACAATGAATCTGACTGTAAAGTCATTAAATTATAGGTTTACTTTAAGTCTGTGTTTTTGGAGACTGCAATCCTTGACCCGAGGGCCAGAGGATGTAAGAGAAAGGTCGATCCAGTGtcaaacagtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtcagtttgtgtctgtgtgtgtctgtgtctgtgagtgtgtgtgtgtgtgtgtgtctgtgagtgtgagtgtgtgtgtgtgtgtctgtgagtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtctgtgtctgtgagtgtgtatgtgtgagtgtgtgtctgtgtgtgtcagtttgtgtctgtgtgtgtgagtgtgtgtctgtgtctgtgagtgtgtatgtgtgagtgtgtgtctgtgtctgtgagtgtgtatgagtgagtgtgtgtgtgtgtcagtttgtgtctgtgagtgtgNNNNtgtgagtgtgtatgagtgagtgtgtgtgtgtgtcagtttgtgtctgtgtgtgtctgtgtgtgtgagtgtgtgtgtgtgtgtgtgtctgtgagtgtgtatgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgcttgtttgtgcCACAGGAACCGTGAGACGCAGCACAGGAACTTTCAGCTTGCGGTTTCACGTCTCCTTTCAGAGCGAGTGTTTGTGATGGCTGCACTCTGATTAACCCTGAAACGACTGAGAGCCAGCGAGGAGCTTCCGCACTCACACTCAGcgattaatggacaccaaacgagcgcgaCGGGGGGAATGGCCTCcactcgactggacactttctctTGTTCTTAACTGCAGCTGTAACGAGGAAGCAGTGTGTTCTGCACCCGCCTGGCGCGCTCTGTCCCGATGGGGGGCCGCGGTGCCGCGCTAGGTCTGCGGCCCCTCCAGGAACTGCCACATCAGCCGGTTCACCGTCTCGGGTTGGTCCTGCTGAACCCAATGGCTGCAGCCCGGAATCATCTTCACGGCAAACGATCCGCAGACGTACGGCCCCGCCTCCTGCGCCGGCTCCGCCCCCAGCAGGGCGTCGGCCTCCCCCCAGATCAGCAGGCAGGACACGCCCACGTCCTGGTGCCTGGGCGGGGCGTTGCTACAGGGGAGACGACGACAGCGGTGAAGTGGACGACATCACTGACTAACGCACACTCAGATTGAGAGAGGCTGGACACAGGTGTTCATgggttaattggttaattgatgtTAAGTGCTACCTCAGGTGTCACCGTTGGGCACGATCGAAGGCTCACCTGAACAGGTTGCGGAAGTAGTGCAGCGGCCCGGTCAGCCCCCCCGGCTGGGACAGGGGGAACAGGTACGCCTCTAGCTCCGGCCCACTCAGACGCCGGCCCGGGGTCCGAATCCCCACACGCCGGCTGCACAGCAGACTGCGCaccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61256 True 2534 TUCP 0.54 2 876554 879513

Neighbor

gene id symbol gene type direction distance location
AMCG00008419 pbx4,LOC103392870 coding upstream 33419 822678 ~ 843135 (+)
AMCG00008417 NA coding upstream 63194 806759 ~ 813360 (+)
AMCG00008418 atp13a1 coding upstream 77491 785426 ~ 799063 (+)
AMCG00008411 NA coding upstream 98123 775391 ~ 778431 (+)
AMCG00008412 NA coding upstream 156680 716095 ~ 719874 (+)
AMCG00008429 NA coding downstream 68144 947657 ~ 950842 (+)
AMCG00008424 NA coding downstream 96714 976227 ~ 983656 (+)
AMCG00008431 xab2 coding downstream 106464 985977 ~ 994819 (+)
AMCG00008430 NA coding downstream 130882 1010395 ~ 1033311 (+)
AMCG00008432 NA coding downstream 173082 1052595 ~ 1055755 (+)
G48996 NA non-coding upstream 92573 765871 ~ 783981 (+)
G48961 NA non-coding upstream 125952 748598 ~ 750602 (+)
G48947 NA non-coding upstream 180441 694468 ~ 696113 (+)
G48921 NA non-coding upstream 185517 640876 ~ 691037 (+)
G48915 NA non-coding upstream 244161 629884 ~ 632393 (+)
G49066 NA non-coding downstream 50193 929706 ~ 930827 (+)
G49069 NA non-coding downstream 53632 933145 ~ 936281 (+)
G49101 NA non-coding downstream 179048 1058561 ~ 1107290 (+)
G49102 NA non-coding downstream 184036 1063549 ~ 1068033 (+)
G49097 NA non-coding downstream 200508 1080021 ~ 1117780 (+)
G48846 NA other upstream 288108 587280 ~ 588446 (+)
G48811 NA other upstream 324648 473745 ~ 551906 (+)
AMCG00008397 ccdc130 other upstream 351229 517499 ~ 525325 (+)
AMCG00008376 NA other upstream 613532 260274 ~ 263022 (+)
AMCG00008375 cacna1a other upstream 672159 153189 ~ 204395 (+)
AMCG00008423 NA other downstream 86325 965838 ~ 968583 (+)
G49208 NA other downstream 443298 1322811 ~ 1324269 (+)
AMCG00008451 ubl5 other downstream 745781 1625294 ~ 1628333 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 1051141 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 1183043 2062556 ~ 2075649 (+)

Expression


Co-expression Network