G50784


Basic Information

Item Value
gene id G50784
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8574014 ~ 8574338 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU63521
atttcccaaattagctcATGCTCTTctgttagtgcttaagaataataataaaaataaagcactgtcacactgccttgtaataattaagtacagttgttaatttagtaaatctaGCTACTTTAAAACCCATTCTGTCTcctacctaagctttcattaatttctaatacattttaggacagccctataactcttaatatgtcaccacaaagtggatagagagcagaagatcacaacaatgttaatatgaatacttcgtgcactgcgcagttggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63521 True 273 lncRNA 0.34 2 8574014 8574338

Neighbor

gene id symbol gene type direction distance location
AMCG00008674 NA coding downstream 8170 8550569 ~ 8565844 (-)
AMCG00008672 NA coding downstream 69318 8502700 ~ 8504696 (-)
AMCG00008673 NA coding downstream 116060 8456517 ~ 8457954 (-)
AMCG00008666 NA coding downstream 217461 8332841 ~ 8356553 (-)
AMCG00008667 NA coding downstream 241192 8329899 ~ 8332822 (-)
AMCG00008681 NA coding upstream 61462 8635800 ~ 8658560 (-)
AMCG00008682 NA coding upstream 127440 8701778 ~ 8717326 (-)
AMCG00008680 pan2,LOC107671829 coding upstream 156387 8730725 ~ 8756432 (-)
AMCG00008686 dnajc14,LOC107737354,LOC107683641 coding upstream 216925 8791263 ~ 8801324 (-)
AMCG00008687 NA coding upstream 231438 8805776 ~ 8819446 (-)
G50740 NA non-coding downstream 190007 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 213052 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 249239 8278752 ~ 8324775 (-)
G50657 NA non-coding downstream 435953 8137475 ~ 8138061 (-)
G50647 NA non-coding downstream 468412 8105372 ~ 8105602 (-)
G50836 NA non-coding upstream 263021 8837359 ~ 8840655 (-)
G50915 NA non-coding upstream 570006 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 802234 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 806413 9380751 ~ 9381754 (-)
G51004 NA non-coding upstream 813920 9388258 ~ 9388608 (-)
G50739 NA other downstream 202684 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 279660 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 280528 8281215 ~ 8293486 (-)
G50710 NA other downstream 304688 8269023 ~ 8269326 (-)
AMCG00008662 NA other downstream 383837 8182929 ~ 8190177 (-)
G50788 NA other upstream 82390 8656728 ~ 8660017 (-)
G51008 NA other upstream 816505 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1763987 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1986528 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 2096611 10670949 ~ 10718201 (-)

Expression


Co-expression Network