AMCG00008674


Basic Information

Item Value
gene id AMCG00008674
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8550569 ~ 8565844 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008674
ATGGATCTGGATGAGCCGGATTTCGACTTCCACAAGAGCGCACAGAGCACCGCCCCGCTGCTGACTGCCACGCCCAGCCGCGCTCTAGTGGACCAGCCAATAGAAATTGGGATCCAGCATCTGCCTCCGGATAAGCCATTCACAGTGCGGGCCCGCCTGCACAGTGAGGACGGGGAGCTGTGGGAAGCATTCTCACACTACCGCAGCGACCAGAAGGGCACTGTGATCTTGTCCCGGGACCAGTCTTTGGGAGGTTCATACAGTGGCCTGGAACCCATGGGTCTGTTCTGGAGTCTGCAGCCTGTGGGGGTAGAGGGCCTGAGGctcaggaaaaaatatgtgGAGACTCCATTCACAGTGGAGGTATCTGTGCTCAGTGACCATGTTCGTTCCTCTGACTCCCCAGTGGGCTGCCATGTTGGTCAGGGGCTGGAGGAGGGGGCAGTGCTGGCTGCAGTGAATGTGGAACGCTGGTACATGGCACCAGGAGTGCGCAGGGTGGAGGTGCGAGAGCAGGGGTTGGTGGGCACCCTCTTCTTGCCTGCAGGTGAGAACTGGGAGGGGGCACTGAGGAGCACTGGCTCCTGTTTTGGTGGGAATTTGTTGGTGAACTACCTCGTAGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008674 True 627 mRNA 0.59 4 8550569 8565844

Neighbor

gene id symbol gene type direction distance location
AMCG00008672 NA coding downstream 45873 8502700 ~ 8504696 (-)
AMCG00008673 NA coding downstream 92615 8456517 ~ 8457954 (-)
AMCG00008666 NA coding downstream 194016 8332841 ~ 8356553 (-)
AMCG00008667 NA coding downstream 217747 8329899 ~ 8332822 (-)
AMCG00008669 LOC106456382,LOC108433351,LOC103385219,LOC103467923,LOC101079871 coding downstream 230272 8316627 ~ 8320297 (-)
AMCG00008681 NA coding upstream 69956 8635800 ~ 8658560 (-)
AMCG00008682 NA coding upstream 135934 8701778 ~ 8717326 (-)
AMCG00008680 pan2,LOC107671829 coding upstream 164881 8730725 ~ 8756432 (-)
AMCG00008686 dnajc14,LOC107737354,LOC107683641 coding upstream 225419 8791263 ~ 8801324 (-)
AMCG00008687 NA coding upstream 239932 8805776 ~ 8819446 (-)
G50740 NA non-coding downstream 166562 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 189607 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 225794 8278752 ~ 8324775 (-)
G50657 NA non-coding downstream 412508 8137475 ~ 8138061 (-)
G50647 NA non-coding downstream 444967 8105372 ~ 8105602 (-)
G50784 NA non-coding upstream 8170 8574014 ~ 8574338 (-)
G50836 NA non-coding upstream 271515 8837359 ~ 8840655 (-)
G50915 NA non-coding upstream 578500 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 810728 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 814907 9380751 ~ 9381754 (-)
G50739 NA other downstream 179239 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 256215 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 257083 8281215 ~ 8293486 (-)
G50710 NA other downstream 281243 8269023 ~ 8269326 (-)
AMCG00008662 NA other downstream 360392 8182929 ~ 8190177 (-)
G50788 NA other upstream 90884 8656728 ~ 8660017 (-)
G51008 NA other upstream 824999 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1772481 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1995022 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 2105105 10670949 ~ 10718201 (-)

Expression


Co-expression Network