AMCG00008669 (LOC106456382,LOC108433351,LOC103385219,LOC103467923,LOC101079871)


Basic Information

Item Value
gene id AMCG00008669
gene name LOC106456382,LOC108433351,LOC103385219,LOC103467923,LOC101079871
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8316627 ~ 8320297 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008669
ATGGGCGAGCAGAACGAACTTACCAATGACTGTGGGCTCCAGATCTACAAAGACAGCTCTGGGCACGTGCTTGCCCGCTCCGGTCTCACTGAAGAAGGTGTTGAAGGAGTCATCCCCTCCTCCCATGGTCTTATCGCTGGGCATCTGGCCATCAGGCTGGATCCCATGCTCCAGGCAATAGAGCTCCCAGCAGGCATTGCCAATCTGGACACCAGCCTGGCCAACGTGGATGGAGATGCACTCACGCTATAA

Function

NR:

description
PREDICTED: tubulin alpha-1C chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008669 True 252 mRNA 0.56 2 8316627 8320297

Neighbor

gene id symbol gene type direction distance location
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding downstream 42939 8251854 ~ 8273688 (-)
AMCG00008659 NA coding downstream 72347 8231679 ~ 8244280 (-)
AMCG00008660 timeless coding downstream 109450 8192252 ~ 8207177 (-)
AMCG00008658 LOC103376555,LOC104932002 coding downstream 170393 8140051 ~ 8146234 (-)
AMCG00008654 NA coding downstream 241603 8037032 ~ 8075024 (-)
AMCG00008667 NA coding upstream 9602 8329899 ~ 8332822 (-)
AMCG00008666 NA coding upstream 12544 8332841 ~ 8356553 (-)
AMCG00008673 NA coding upstream 136220 8456517 ~ 8457954 (-)
AMCG00008672 NA coding upstream 182403 8502700 ~ 8504696 (-)
AMCG00008674 NA coding upstream 230272 8550569 ~ 8565844 (-)
G50657 NA non-coding downstream 178566 8137475 ~ 8138061 (-)
G50647 NA non-coding downstream 211025 8105372 ~ 8105602 (-)
G50632 NA non-coding downstream 211824 8005638 ~ 8104803 (-)
G50646 NA non-coding downstream 217182 8098772 ~ 8099445 (-)
G50615 NA non-coding downstream 331676 7984740 ~ 7984951 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding upstream 37153 8357450 ~ 8360962 (-)
G50740 NA non-coding upstream 52209 8372506 ~ 8384007 (-)
G50784 NA non-coding upstream 253717 8574014 ~ 8574338 (-)
G50836 NA non-coding upstream 517062 8837359 ~ 8840655 (-)
G50915 NA non-coding upstream 824047 9144344 ~ 9149938 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 22273 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 23141 8281215 ~ 8293486 (-)
G50710 NA other downstream 47301 8269023 ~ 8269326 (-)
AMCG00008662 NA other downstream 126450 8182929 ~ 8190177 (-)
G50656 NA other downstream 181213 8134581 ~ 8135414 (-)
G50739 NA other upstream 47619 8367916 ~ 8371330 (-)
G50788 NA other upstream 336431 8656728 ~ 8660017 (-)
G51008 NA other upstream 1070546 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 2018028 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 2240569 10560866 ~ 10603373 (-)

Expression


Co-expression Network