AMCG00008672


Basic Information

Item Value
gene id AMCG00008672
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8502700 ~ 8504696 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008672
ATGCCCAGCCATGCTCTTGTGGACCAGCCAATAGAAATTGGGATCCGGCATCTGCCCCCGGATATGCCATTCACAGTGTGGTCCCGTCTGCGCAGTGAGGAAGGGGAACTGTGGGAAGCATTCTCACACTACCGCAGCGACCAGAAGGGCACTGTGATCTCTGGGTACTTCATGTTGAACTTGACATTGTCCCGGGACCAGTCTTTGGGAGGTTCATACAGTGGCCTGGAACCCATGGGTCTGTTCTGGAGTCTGCAGCCTGTGGGGGTAGAGGGCCTGAGgctcaggaaaaaaaatgtggagACTCTATTCACAGTGGAGGTATCTGTGTTCAGTGACCATGTTCGCTCCTCTGACTCCCCAGTGGGCTGCCACTTTGGTCAGGGGCTGGAGGAGGGGGCAGTGCTGGTTGCAGTGAATGTGGAACGCTGGTACATGGCACCAGGAGTGTGCAGGGTGGAGGTGCGAGAGCAGGGGTTGGTGGCCACCCTCTTCTTGCCTGCAGGTGGAACTGGGATGGGGCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008672 True 528 mRNA 0.57 3 8502700 8504696

Neighbor

gene id symbol gene type direction distance location
AMCG00008673 NA coding downstream 44746 8456517 ~ 8457954 (-)
AMCG00008666 NA coding downstream 146147 8332841 ~ 8356553 (-)
AMCG00008667 NA coding downstream 169878 8329899 ~ 8332822 (-)
AMCG00008669 LOC106456382,LOC108433351,LOC103385219,LOC103467923,LOC101079871 coding downstream 182403 8316627 ~ 8320297 (-)
AMCG00008661 si:ch211-114n24.6,LOC108275942,LOC107659949,LOC106456382,LOC108433351,LOC103467923 coding downstream 229012 8251854 ~ 8273688 (-)
AMCG00008674 NA coding upstream 45873 8550569 ~ 8565844 (-)
AMCG00008681 NA coding upstream 131104 8635800 ~ 8658560 (-)
AMCG00008682 NA coding upstream 197082 8701778 ~ 8717326 (-)
AMCG00008680 pan2,LOC107671829 coding upstream 226029 8730725 ~ 8756432 (-)
AMCG00008686 dnajc14,LOC107737354,LOC107683641 coding upstream 286567 8791263 ~ 8801324 (-)
G50740 NA non-coding downstream 118693 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 141738 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 177925 8278752 ~ 8324775 (-)
G50657 NA non-coding downstream 364639 8137475 ~ 8138061 (-)
G50647 NA non-coding downstream 397098 8105372 ~ 8105602 (-)
G50784 NA non-coding upstream 69318 8574014 ~ 8574338 (-)
G50836 NA non-coding upstream 332663 8837359 ~ 8840655 (-)
G50915 NA non-coding upstream 639648 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 871876 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 876055 9380751 ~ 9381754 (-)
G50739 NA other downstream 131370 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 208346 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 209214 8281215 ~ 8293486 (-)
G50710 NA other downstream 233374 8269023 ~ 8269326 (-)
AMCG00008662 NA other downstream 312523 8182929 ~ 8190177 (-)
G50788 NA other upstream 152032 8656728 ~ 8660017 (-)
G51008 NA other upstream 886147 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1833629 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 2056170 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 2166253 10670949 ~ 10718201 (-)

Expression


Co-expression Network