Gene
RNA
| Item | Value |
|---|---|
| gene id | G53428 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 18131480 ~ 18131785 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66837 | True | 306 | lncRNA | 0.53 | 1 | 18131480 | 18131785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008999 | NA | coding | downstream | 466744 | 17655595 ~ 17664736 (-) |
| AMCG00009000 | NA | coding | downstream | 504697 | 17615728 ~ 17626783 (-) |
| AMCG00008998 | scaf1,phrf1,LOC107580000 | coding | downstream | 520122 | 17601832 ~ 17611358 (-) |
| AMCG00008994 | NA | coding | downstream | 911039 | 17205090 ~ 17220441 (-) |
| AMCG00008992 | NA | coding | downstream | 1142054 | 16970232 ~ 16989426 (-) |
| AMCG00009015 | NA | coding | upstream | 19078 | 18150863 ~ 18151365 (-) |
| AMCG00009012 | NA | coding | upstream | 44110 | 18175895 ~ 18208537 (-) |
| AMCG00009013 | NA | coding | upstream | 92062 | 18223847 ~ 18253002 (-) |
| AMCG00009011 | LOC105011705,LOC106613920 | coding | upstream | 140833 | 18272618 ~ 18288172 (-) |
| AMCG00009018 | eif4a2,LOC107103884,LOC107593804 | coding | upstream | 245649 | 18377434 ~ 18382391 (-) |
| G53425 | NA | non-coding | downstream | 17842 | 18102722 ~ 18113638 (-) |
| G53411 | NA | non-coding | downstream | 46998 | 18084247 ~ 18084482 (-) |
| G53286 | NA | non-coding | downstream | 476272 | 17654125 ~ 17655208 (-) |
| G53188 | NA | non-coding | downstream | 787698 | 17343442 ~ 17343782 (-) |
| G53156 | NA | non-coding | downstream | 1021769 | 17109061 ~ 17109711 (-) |
| G53478 | NA | non-coding | upstream | 175652 | 18307437 ~ 18307999 (-) |
| G53543 | NA | non-coding | upstream | 469928 | 18601713 ~ 18601951 (-) |
| G53556 | NA | non-coding | upstream | 527566 | 18659351 ~ 18659633 (-) |
| G53568 | NA | non-coding | upstream | 590325 | 18722110 ~ 18722374 (-) |
| G53577 | NA | non-coding | upstream | 703351 | 18835136 ~ 18835373 (-) |
| G53355 | lrrc4b,LOC107677294,LOC107556667 | other | downstream | 262784 | 17868386 ~ 17868696 (-) |
| AMCG00009001 | NA | other | downstream | 384437 | 17724719 ~ 17747043 (-) |
| AMCG00008989 | prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 | other | downstream | 1218181 | 16823795 ~ 16913299 (-) |
| G53017 | NA | other | downstream | 1517019 | 16613224 ~ 16614461 (-) |
| G52951 | NA | other | downstream | 1726354 | 16404710 ~ 16405126 (-) |
| AMCG00009029 | NA | other | upstream | 1829242 | 19961027 ~ 19970276 (-) |
| AMCG00009027 | NA | other | upstream | 1929739 | 20061524 ~ 20062179 (-) |
| G53809 | NA | other | upstream | 2048014 | 20179799 ~ 20271814 (-) |
| G54003 | LOC107575789 | other | upstream | 4051303 | 22183088 ~ 22183565 (-) |
| AMCG00009060 | hltf | other | upstream | 5693444 | 23825229 ~ 23863035 (-) |
