Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009000 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 17615728 ~ 17626783 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009000 | True | 887 | mRNA | 0.57 | 4 | 17615728 | 17626783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008998 | scaf1,phrf1,LOC107580000 | coding | downstream | 4370 | 17601832 ~ 17611358 (-) |
| AMCG00008994 | NA | coding | downstream | 395287 | 17205090 ~ 17220441 (-) |
| AMCG00008992 | NA | coding | downstream | 626302 | 16970232 ~ 16989426 (-) |
| AMCG00008987 | NA | coding | downstream | 831706 | 16782779 ~ 16784022 (-) |
| AMCG00008980 | NA | coding | downstream | 1096162 | 16478788 ~ 16519566 (-) |
| AMCG00008999 | NA | coding | upstream | 28812 | 17655595 ~ 17664736 (-) |
| AMCG00009015 | NA | coding | upstream | 524080 | 18150863 ~ 18151365 (-) |
| AMCG00009012 | NA | coding | upstream | 549112 | 18175895 ~ 18208537 (-) |
| AMCG00009013 | NA | coding | upstream | 597064 | 18223847 ~ 18253002 (-) |
| AMCG00009011 | LOC105011705,LOC106613920 | coding | upstream | 645835 | 18272618 ~ 18288172 (-) |
| G53188 | NA | non-coding | downstream | 271946 | 17343442 ~ 17343782 (-) |
| G53156 | NA | non-coding | downstream | 506017 | 17109061 ~ 17109711 (-) |
| G53147 | NA | non-coding | downstream | 533663 | 17081678 ~ 17082065 (-) |
| G53142 | NA | non-coding | downstream | 554177 | 17060808 ~ 17061551 (-) |
| G53134 | NA | non-coding | downstream | 575048 | 17040107 ~ 17040680 (-) |
| G53286 | NA | non-coding | upstream | 27342 | 17654125 ~ 17655208 (-) |
| G53411 | NA | non-coding | upstream | 457464 | 18084247 ~ 18084482 (-) |
| G53425 | NA | non-coding | upstream | 475939 | 18102722 ~ 18113638 (-) |
| G53428 | NA | non-coding | upstream | 504697 | 18131480 ~ 18131785 (-) |
| G53478 | NA | non-coding | upstream | 680654 | 18307437 ~ 18307999 (-) |
| AMCG00008989 | prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 | other | downstream | 702429 | 16823795 ~ 16913299 (-) |
| G53017 | NA | other | downstream | 1001267 | 16613224 ~ 16614461 (-) |
| G52951 | NA | other | downstream | 1210602 | 16404710 ~ 16405126 (-) |
| AMCG00008971 | NA | other | downstream | 1541793 | 16063554 ~ 16073935 (-) |
| G52834 | NA | other | downstream | 1652111 | 15957667 ~ 15963617 (-) |
| AMCG00009001 | NA | other | upstream | 97936 | 17724719 ~ 17747043 (-) |
| G53355 | lrrc4b,LOC107677294,LOC107556667 | other | upstream | 241603 | 17868386 ~ 17868696 (-) |
| AMCG00009029 | NA | other | upstream | 2334244 | 19961027 ~ 19970276 (-) |
| AMCG00009027 | NA | other | upstream | 2434741 | 20061524 ~ 20062179 (-) |
| G53809 | NA | other | upstream | 2553016 | 20179799 ~ 20271814 (-) |
