AMCG00008999


Basic Information

Item Value
gene id AMCG00008999
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 17655595 ~ 17664736 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008999
GGAGAAGGAACAGGGGGAGGGAGGCGTGTCGACAACTTGTTACTCCAGGGGCACCTCCACACCAATCAGCGCACCAGACCGTTTATCCGTCGGGCGAGGGGGCCCAATCAGCAGGCATGAGCCCGGAGATAGCCGAACTGAACCGAACGCGGCGGGGCTTAACTTGTTGTTGTGAATACGGCTATAACCCTGAGCAAGAGACCGAAAGAAAGAGTCGCCTAAGATTTAAAACACCGATAACTTTCGGTTTGTTATCGCtttaaaagtacaaatctgGTTGTTTTGAATTTCTAAAACGTGCCTGACACACAGTTATGATTCGCTTGGCTGTGTTTCTGACGTTGTGCGTCGCTCTTGGCTCCGGTGTTTTCAGgatTCCTCTGTTGAAGACTCGCTCTGTGCGCAGGATGCTGACGGACAGCGGGCTGACCTCAGAGCAGCTGAGGGACCGGGTCAGCAGTAAGCAGGGGCAGGGCGAGGTGTTTTACCACACCACAGCATCACCCCAGCCCCTCCCCATGGAGAGACTGGACAACTTTATGGATgcACAGTACTATGGGCAGGTGGGGCTGGGCTCCCCTGCTCAGAACTTCACGGTGGTGTTTGATACCGGCTCCTCCAACCTGTGGGTCCCATCCATCAAGTGCTCCTTCCTCAACCTGGCCTGCTGGCTGCACAGGCGCTATGACTCCAGGAAGTCCAGCTCTCATGTTGAAAACGGGACGCAGTTCCACATCCAGTACGGCCGAGGCAGCCTGAGTGGCTTCCTGAGTCAGGACACCCTGACCctGGCCGGACTGATGGTCAGTGGTCAGTGTTTTGGGGAGGCAGTTAGAGAGCCGGGTGTGGCTTTTGCCTTTGCTCGATTTGACGGTATCCTGGGCCTGGGGTACCCCTCCATCGCCATTGCTGCAGCAACGCCCCCCTTCGACCTCATCATGGACCAGAAACTGCTGCCTAGCAATGTATTCTCCTTCTACATcaacagGGACACTGCGGGATCTGTGGGGGGGGAACTGGTGCTGGGAGGGGTCGACCCAAATTACTACGATGGAGAGCTGCACTACGTCAACGTGACTCGCAAGGCATACTGGCAGATAGCACTGGATGGTGTTTCTGTAGGTAATCAGCTGTCGCTATGCAAAGGTGGTTGCCAAGCAATCGTTGACACAGGAACCTCTCTGATGGTAGGGCCATCCCAGGAGATCAGAGCTCTGCAGAAAGCCATTGGTGCATACCCACTGCTGATGGGAGAGgaGTCAATTGcgggggtgtctgtgtgtctgtctggctTTCTGGCAATGGACATCCCACCCCCCGCTGGGCCACTGTGGATTCTGGGATATAATTTCATTGGCCGATACTACACTGTGTTTGACAGGCAGAACGACAGGGTGGGGTTCGCCCCCTCCAAATGATGGACCGGCACactgaccccccccacccactcacTCGCTGTAGAGGATCAAGCTTTAATCTCTCAATGCCCAACCAGCCTCACAACCCAGTACATGAAATCTAATTTACACTGAAATGCTAATGTGTACACACAGGCAGATAGTTATACTCTAGTGATTGGCACTGGGACTTAATtctgcctgctgctgctgctgccgctgcttCCCTGAAAACTTGTGACCGAACCAATGAAGATGATTTAGGGGAAGCTCACTGGCGCTCCTCCTTTGGAGCTGCCAATGTTTGTTAGGGCCGTGCTCCATGCAATGCCTGTGCTGTAACAGAGGGCGCCTGGGTTACCATTGCAATCTGCATACTTGAAATAAATGTGCTTCCTTATCAAGCCCAGTCAGCGGgggtctgtgtgcgtctctcaAATTCTGatttaaagtgctttattggcatgaccaggATAAGTATAGCCAAAGCATTAGTAATATGTCAACaggtctctgtgtttgtgtgtctgtctgtcatgcACACACTCATTCACTTGGTAACTTCACTCTCACAATAACAATCAGAATAGCAATTCAATCCATAACAATAAAAGGTGTTATAATTTCACAactatgaaataataaaatcacatatGAGGAACAAGCCAATCACAGTGCAGCATTTCCACACATTCCTATAACATCTAGATGTTGTATAACCTCTAGATCCTGTGCCAAATTATCactgttttaacatttcagttacttgctttttaataaatca

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008999 True 2181 mRNA 0.51 8 17655595 17664736

Neighbor

gene id symbol gene type direction distance location
AMCG00009000 NA coding downstream 28812 17615728 ~ 17626783 (-)
AMCG00008998 scaf1,phrf1,LOC107580000 coding downstream 44237 17601832 ~ 17611358 (-)
AMCG00008994 NA coding downstream 435154 17205090 ~ 17220441 (-)
AMCG00008992 NA coding downstream 666169 16970232 ~ 16989426 (-)
AMCG00008987 NA coding downstream 871573 16782779 ~ 16784022 (-)
AMCG00009015 NA coding upstream 486127 18150863 ~ 18151365 (-)
AMCG00009012 NA coding upstream 511159 18175895 ~ 18208537 (-)
AMCG00009013 NA coding upstream 559111 18223847 ~ 18253002 (-)
AMCG00009011 LOC105011705,LOC106613920 coding upstream 607882 18272618 ~ 18288172 (-)
AMCG00009018 eif4a2,LOC107103884,LOC107593804 coding upstream 712698 18377434 ~ 18382391 (-)
G53286 NA non-coding downstream 387 17654125 ~ 17655208 (-)
G53188 NA non-coding downstream 311813 17343442 ~ 17343782 (-)
G53156 NA non-coding downstream 545884 17109061 ~ 17109711 (-)
G53147 NA non-coding downstream 573530 17081678 ~ 17082065 (-)
G53142 NA non-coding downstream 594044 17060808 ~ 17061551 (-)
G53411 NA non-coding upstream 419511 18084247 ~ 18084482 (-)
G53425 NA non-coding upstream 437986 18102722 ~ 18113638 (-)
G53428 NA non-coding upstream 466744 18131480 ~ 18131785 (-)
G53478 NA non-coding upstream 642701 18307437 ~ 18307999 (-)
G53543 NA non-coding upstream 936977 18601713 ~ 18601951 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other downstream 742296 16823795 ~ 16913299 (-)
G53017 NA other downstream 1041134 16613224 ~ 16614461 (-)
G52951 NA other downstream 1250469 16404710 ~ 16405126 (-)
AMCG00008971 NA other downstream 1581660 16063554 ~ 16073935 (-)
G52834 NA other downstream 1691978 15957667 ~ 15963617 (-)
AMCG00009001 NA other upstream 59983 17724719 ~ 17747043 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other upstream 203650 17868386 ~ 17868696 (-)
AMCG00009029 NA other upstream 2296291 19961027 ~ 19970276 (-)
AMCG00009027 NA other upstream 2396788 20061524 ~ 20062179 (-)
G53809 NA other upstream 2515063 20179799 ~ 20271814 (-)

Expression


Co-expression Network