AMCG00008992


Basic Information

Item Value
gene id AMCG00008992
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16970232 ~ 16989426 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008992
ATGGAGGCGTCCGTGGTGGAGCAGCTGCTGGCCACAGTAGTGAGGCTACAGGTGCAGCAGCAACAGACCCTGGAGATGCTGGCACAGCAAGTCCGAGCACCAGCTCCTGCACTTAACCCTTATGTGGCCGCAATGAACCCGCAGGCCGGCTCATTCCTGAGTCGATCTCTGCTGTACAACAGCTGGGACTTTGAGCTGATAGTCCCTGGTAATCTGGAGAGAGAGTGCATAGAGGAGCAGTGTACCTATGAGGAGGCCAGAGAGGTGTTCGAGGACGATGCCAAGACTGTGAGAGATAGGGATGAAGGGgggagggatggggggagggggagtaggaaagggagagggggagaagaggATGTCTCTGCCCCCCTGCCCAAGCCCCACTCGGTGCTGGCTGGTGCTGAGCTTGGGGAAGCTGTGACCGTGCTGTGGAATCTGGGGCAGATAGCACCTCTGACCTGTGCCACCACAGCCCCACACTGGCTTCACAggtgtctgtctcactctcacTGTCTTGTTGATCGATCGTCTTGGTCCCTGTGGTAA

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008992 True 549 mRNA 0.58 3 16970232 16989426

Neighbor

gene id symbol gene type direction distance location
AMCG00008987 NA coding downstream 186210 16782779 ~ 16784022 (-)
AMCG00008980 NA coding downstream 450666 16478788 ~ 16519566 (-)
AMCG00008975 NA coding downstream 631524 16336415 ~ 16338708 (-)
AMCG00008976 LOC107551165 coding downstream 647601 16319368 ~ 16322631 (-)
AMCG00008977 LOC106517428,LOC102198306 coding downstream 671976 16293316 ~ 16298256 (-)
AMCG00008994 NA coding upstream 215664 17205090 ~ 17220441 (-)
AMCG00008998 scaf1,phrf1,LOC107580000 coding upstream 612406 17601832 ~ 17611358 (-)
AMCG00009000 NA coding upstream 626302 17615728 ~ 17626783 (-)
AMCG00008999 NA coding upstream 666169 17655595 ~ 17664736 (-)
AMCG00009015 NA coding upstream 1161437 18150863 ~ 18151365 (-)
G53102 NA non-coding downstream 132669 16833331 ~ 16837563 (-)
G53096 NA non-coding downstream 219615 16747851 ~ 16750617 (-)
G53042 NA non-coding downstream 241040 16673709 ~ 16729192 (-)
G52999 NA non-coding downstream 428677 16541268 ~ 16541555 (-)
G52944 NA non-coding downstream 607353 16362622 ~ 16362879 (-)
G53127 NA non-coding upstream 12584 17002010 ~ 17002218 (-)
G53134 NA non-coding upstream 50681 17040107 ~ 17040680 (-)
G53142 NA non-coding upstream 71382 17060808 ~ 17061551 (-)
G53147 NA non-coding upstream 92252 17081678 ~ 17082065 (-)
G53156 NA non-coding upstream 119635 17109061 ~ 17109711 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other downstream 56933 16823795 ~ 16913299 (-)
G53017 NA other downstream 355771 16613224 ~ 16614461 (-)
G52951 NA other downstream 565106 16404710 ~ 16405126 (-)
AMCG00008971 NA other downstream 896297 16063554 ~ 16073935 (-)
G52834 NA other downstream 1006615 15957667 ~ 15963617 (-)
AMCG00009001 NA other upstream 735293 17724719 ~ 17747043 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other upstream 878960 17868386 ~ 17868696 (-)
AMCG00009029 NA other upstream 2971601 19961027 ~ 19970276 (-)
AMCG00009027 NA other upstream 3072098 20061524 ~ 20062179 (-)
G53809 NA other upstream 3190373 20179799 ~ 20271814 (-)

Expression


Co-expression Network