AMCG00010008


Basic Information

Item Value
gene id AMCG00010008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9419864 ~ 9425212 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010008
ATGGCTCTGCTTCGGCATTTCCTGCTCTTGCTCTTCGGATGGAGCTGTATACACAGCGGATTCTGCGTTATGTTGAAAGACCATCTCAGTGAGCTGAAGAGAAAGGCGCAATCGGGCCATTTGGTCCGGACGGGGGTCACAGATCAGCCCCCCACAGCCCGGGAGGAGCTGCTCTTGCAGGACGCGGTGTCCGAGCACATGCGGCTGCTCTATGAGAAGTACAGCTCGGCTGGGTTCCACTTCAGGGATGGGAACACGGTGCGCAGCTTTAAAGCGCACTGGGGGACTATTAACAATAGACAACTGCAGATCTTTAACCTGACTACCCTTACGAAGTCAGAAGACATTCTTTCTGCCACGCTACACTACTACATAGGGGACCTATTGAACAACACCTACCCACGGTGTACCCGGCCAAAGAATTGTGGTCGCCATGGCCGAAAACAGCAGGCCCACATCCACCTTGGCATCTGGAGTGTTGCTTCTGTGGATAACACCACCAGAACTCTGGACCACTTTCTTATCAATGTCTCCACTGTCTACAGAGATTTCATATCTTGGCAGTGGAAGGACATTACTCGAGTTCTCAACGAGGCGAAACATAACGACGAGCTACTAATCGGTATTGACATTGCTTCGCAAGGCCACAACCCCTGGAAAAAGCTCCTGTCCGACCGGTCCCCCTACATCCTAGTGTACGCCAATGACTCTGCTATCTCCGAGCCAGAGAGCGTCGTCTCCACACTGCAGCGACACAAGGGAGCGCTGGCTCCGGGCCTTCACAAGCTGGGAATGCATACACGTAACAGCACGGTACAGCGGAGGGCCAAACGCTCAGCCAGTATACTCCTCCCTCTGCAGAACAACGAGCTGCCGGGGGCTGAGTATCAGTATAACGAGGCCCAAACCTGGGAGGAGACGAATCCCTCCAAGCACCTGGAGACTCGGCCGGGTGAGAGGCAGCGGAACAAAAAGAAGCCGCGAAAGAACCGCCACAAGGTGCTCGAATTTGACGAGCAAACCTTAAAGAAGGCCCGAAAGAAGCAGTGGAATGAGCCGAGGAACTGTGCGCGCAGGTACCTGAAGGTCGACTTTGAAGATATTGGCTGGAGCGAATGGATTATTTCACCTACGTCTTTTGACGCCTTCTATTGTTCAGGATCCTGCCAGTTTCCAATGCCAAAGTCTTTAAAGCCATCCAACCACGCCACCATCCAGAGCATCGTGAGGGCCGTAGGAGTCGTCCCTGGGATTCCAGAGCCCTGCTGTGTCCCTGAGAGGATGTCATCCCTGAGTATTTTGTTCCTGGATGAAGAGTTGAATGTCGTCCTCAAGGTCTACCCAAACATGACAGTGGAGTCCTGTGCTTGCAGATAA

Function

GO: NA

KEGG:

id description
K05496 BMP3; bone morphogenetic protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010008 True 1377 mRNA 0.53 3 9419864 9425212

Neighbor

gene id symbol gene type direction distance location
AMCG00010004 tmem175,LOC107744870 coding downstream 203176 9205556 ~ 9216688 (-)
AMCG00010000 NA coding downstream 362002 9032122 ~ 9057862 (-)
AMCG00010001 arl15b,LOC107713334,LOC108433533,LOC107595536 coding downstream 476149 8838105 ~ 8943715 (-)
AMCG00009994 NA coding downstream 659829 8753627 ~ 8760035 (-)
AMCG00009981 sub1,tcp4,LOC106568402 coding downstream 1420315 7995588 ~ 7999549 (-)
AMCG00010011 cssa24h4orf22 coding upstream 114288 9539500 ~ 9544638 (-)
AMCG00010010 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107602014,LOC107744874,LOC107661278 coding upstream 187132 9612344 ~ 9619471 (-)
AMCG00010009 prdm8,prdm8b coding upstream 213976 9639188 ~ 9641912 (-)
AMCG00010015 NA coding upstream 497400 9922612 ~ 9927658 (-)
AMCG00010016 bmp2k coding upstream 510667 9935879 ~ 9976259 (-)
G77193 NA non-coding downstream 508 9416444 ~ 9419356 (-)
G77183 NA non-coding downstream 41853 9376179 ~ 9378011 (-)
G77172 NA non-coding downstream 167274 9252258 ~ 9252590 (-)
G77163 NA non-coding downstream 215749 9203390 ~ 9204115 (-)
G77050 NA non-coding downstream 719723 8697678 ~ 8700141 (-)
G77199 NA non-coding upstream 4296 9429508 ~ 9431648 (-)
G77202 NA non-coding upstream 92513 9517725 ~ 9518012 (-)
G77208 NA non-coding upstream 145291 9570503 ~ 9570807 (-)
G77283 NA non-coding upstream 557751 9982963 ~ 9983176 (-)
G77328 NA non-coding upstream 728608 10153820 ~ 10154363 (-)
AMCG00009989 NA other downstream 1098520 8314109 ~ 8321344 (-)
AMCG00009987 NA other downstream 1212537 8195735 ~ 8207327 (-)
AMCG00009962 NA other downstream 2130170 7284862 ~ 7289694 (-)
G76762 NA other downstream 2357043 7057805 ~ 7062821 (-)
G76752 LOC101154678 other downstream 2482796 6936718 ~ 6937068 (-)
G77544 NA other upstream 2303291 11728503 ~ 11729165 (-)
AMCG00010082 NA other upstream 3922329 13347541 ~ 13470255 (-)
AMCG00010142 LOC104932682,LOC108255669 other upstream 6784107 16209319 ~ 16224041 (-)
AMCG00010169 cnot6l,LOC107752360 other upstream 7857434 17282646 ~ 17295515 (-)
AMCG00010183 stoml2 other upstream 8048617 17473829 ~ 17478791 (-)

Expression


Co-expression Network