G77172


Basic Information

Item Value
gene id G77172
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9252258 ~ 9252590 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU96314
CTCAAACATAGGTGGGGTGCCCTTCTCTGGCAGTGTGCAGCCCAGGAGCTCAGCAAGAAACTTTGCCATATAAAAGGAGTGGGTAGGTTTCCCTGGACAGACTCTGAACACCACTGGCTTATATTCCTTACAAAGAAGCTGACAAGAAGAGATTCCTCCCCTTTATAGGAATGTCCTGCAATAATTCCTTTGTCTCTTTAGCACATCCAGGCTGCATACCTATCAACCTCTAAATGGGCACTGAGAAAAGGTGAAGCACAGCAGTGACAGCGGCAATCTCCCAGCAGTTTAATACCTAGTAATTCAGAATGAATGACCAGCACAATCCCCGTG

Function

GO:

id name namespace
GO:0031290 retinal ganglion cell axon guidance biological_process

KEGG:

id description
ko04727 GABAergic synapse
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU96314 True 333 lncRNA 0.47 1 9252258 9252590

Neighbor

gene id symbol gene type direction distance location
AMCG00010004 tmem175,LOC107744870 coding downstream 35570 9205556 ~ 9216688 (-)
AMCG00010000 NA coding downstream 194396 9032122 ~ 9057862 (-)
AMCG00010001 arl15b,LOC107713334,LOC108433533,LOC107595536 coding downstream 308543 8838105 ~ 8943715 (-)
AMCG00009994 NA coding downstream 492223 8753627 ~ 8760035 (-)
AMCG00009981 sub1,tcp4,LOC106568402 coding downstream 1252709 7995588 ~ 7999549 (-)
AMCG00010008 NA coding upstream 167274 9419864 ~ 9425212 (-)
AMCG00010011 cssa24h4orf22 coding upstream 286910 9539500 ~ 9544638 (-)
AMCG00010010 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107602014,LOC107744874,LOC107661278 coding upstream 359754 9612344 ~ 9619471 (-)
AMCG00010009 prdm8,prdm8b coding upstream 386598 9639188 ~ 9641912 (-)
AMCG00010015 NA coding upstream 670022 9922612 ~ 9927658 (-)
G77163 NA non-coding downstream 48143 9203390 ~ 9204115 (-)
G77050 NA non-coding downstream 552117 8697678 ~ 8700141 (-)
G76959 NA non-coding downstream 1222351 8021115 ~ 8029907 (-)
G76937 NA non-coding downstream 1357868 7834671 ~ 7894390 (-)
G76833 NA non-coding downstream 1816711 7434691 ~ 7435547 (-)
G77183 NA non-coding upstream 123589 9376179 ~ 9378011 (-)
G77193 NA non-coding upstream 163854 9416444 ~ 9419356 (-)
G77199 NA non-coding upstream 176918 9429508 ~ 9431648 (-)
G77202 NA non-coding upstream 265135 9517725 ~ 9518012 (-)
G77208 NA non-coding upstream 317913 9570503 ~ 9570807 (-)
AMCG00009989 NA other downstream 930914 8314109 ~ 8321344 (-)
AMCG00009987 NA other downstream 1044931 8195735 ~ 8207327 (-)
AMCG00009962 NA other downstream 1962564 7284862 ~ 7289694 (-)
G76762 NA other downstream 2189437 7057805 ~ 7062821 (-)
G76752 LOC101154678 other downstream 2315190 6936718 ~ 6937068 (-)
G77544 NA other upstream 2475913 11728503 ~ 11729165 (-)
AMCG00010082 NA other upstream 4094951 13347541 ~ 13470255 (-)
AMCG00010142 LOC104932682,LOC108255669 other upstream 6956729 16209319 ~ 16224041 (-)
AMCG00010169 cnot6l,LOC107752360 other upstream 8030056 17282646 ~ 17295515 (-)
AMCG00010183 stoml2 other upstream 8221239 17473829 ~ 17478791 (-)

Expression


Co-expression Network