AMCG00009994


Basic Information

Item Value
gene id AMCG00009994
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 8753627 ~ 8760035 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009994
GAAGGAAGCGCCGGCGACGACAAGTAAAAGTAACAAGTTGAACGTGTCAATGTATCATATAAAACTTCATTCATGAATACCGAGGTTGTAGTGCTGTATTTTGCCAAAAGTGCCGAGATAGCATACGTCAGATCTGAGACAATCTCTGTGCCACAGGAAATAACGTCCCTGCAACTGTGGCAGGAGCTGGTCAACAGACACCCcagCCTATCAGTGCTACGGGACCAGGTGGTGCTTGCGGTGCGTCAGGAATACGTGGCTCTTGGGGAGCAGCTGCTGAGCCTCCAGTCTGGTGACGAGGTTGCCGTGATTCCTCCTCTCAGTGGGGGCTAGCTGTCAAGCTCACACGTGACCAtaaagttacatttttgtacagATATGAGTGGCTGTGACAGTGATGCCAGGGACCTCATCAGGCTGACGTTTGACAAGCTGTCTACGGATACAGTCTCCGAGTCTGTAGTGTGCCCTTCCTGTGGAGCAGTGTCCATGTTTATTGGGACAACGAGAAACAGTTTTGAGGGAAAGAAGGTTGTTCAGCTTGAATATGAGGCATACATCCCAATGGCCGAGGCACAGCTCAAGACTATATTCAGGGAAATAAGAAAGAGATGGCCATCTGTGAAGCACATCTGTGTACATCATAGGCTGGGGATTGTGCCAGTCACTGAAGCGAGTGTCATCATCGGGATCTCTTCAACGCACAGGAGCGAGTCTCTTGAGGCAGTGCGATATTGCATCGATACATTAAAAGCAACCGTTCCGATTTGGAAAAAAGAGGTTTATGAAACGGAGGGTTCCTCTTGGAAGGAGAACAAAGAGTGTCTTTGGGCAGGAAATTAAGTGAAGTAACTGAGGACTGTGAACAACAGGAATTTCAGGAAATGGGAATTCTCTCATTTAAttctttatataatttattggaAAATTAAGGACAAGCTATTTTTGGGTTATGTAGTATTCCACTTTATTCATCTGTGGTTGTCACTGCAATACACAAGGCAGAAATATCTAGTCACCACatttagaaatacaattttagaatgaactaaaataactatattaaaatatttaaagatattgaAAGTCAAATTCTGAAGTGGCTCTTCTTCTATATATTACACACTGACAAGTGTTAACAGAAAAAGACATCCTATCCGcaatctcaaaatgatttgtaCCACTTgcaacataaaatgaaaaaagtgaatGAAACGCATAATATATGGTTCTAAGCTTTAATCATTTGAAtgtgcaagaaataaaaatatactcCCCTGTtaccagtaaataaataaaaaatacaccagTATGTTTTTCCCCAGTATAgcacatatgtatttttccacatcccctcaaactgtttttttgtttttaatgcgaGAGATTAGAGACTCAGTTTGattaaattgaaacattaattattttccagatTTCAAGTTGTGGACCATTATGAACTGTTCCCCCCTTCCTCCATCTCCCCAAAGAGCATATTGGAGCCCGTGACTTGGTTGGATTAGTTGAGGCATTATGTAGAGGGTACAGGCAGTTTTATCAAGACATGTTGTTCTCgtgtatacattgtatttacatgtttttttttgtttagggTTAGTTAACAACTAATATATAGTGACTAAGCTTACCCTTGGTGTGAACTGTCGACCACTGATCGGGATATACCACACTGTTGGGAGTACTTCCAAGAAAAGCATATGCTATAGCAGTCCTTGCAGGTCTGCAGGTTTTTTAGATATGGCCCAATCAACAATTGATTAAAACCTGGAATAAACAAGTAATTTCACTTCTTATCCTAATAATTACTTCAATTGAGTAATTAAGACCTCACACCCCTAAGGCCTGTAATTCCACACCCCTGTTGTAGGATAAGGGAAAGACATTTCTGATGCATATGAAACCTAATAAATGACAACCTAACTCCCACTGTGAAGTGATAAATGCAGCTTTACCTTTAAGGGTAAACTGTTGATTTTTACAAAAcggaaaacaaaagacaatgacaagcttcacatttttatttaatcaaagtgtGTTACAGTGACTAGGACTATACTTTAAGAACAAAGATGTACCAGCAGTgaataaaacaagtttaataGATTAGAAATGAATAATGCTAATAAAGCAAACTGGAGTGTTATCGTAcccatgttttatatataaaaaatcagTGCAAAAGTCCACAGAAGTAAACATTCTATCAGTACAGTATTGACATGTAATTCATCAGATCCATAGATCTAATCACAGATACCTGGTCCTAAATTAGCTCTGCAATGACTACACCAAagaatttgaataaaacaaacaacaaaactaatcCCTGtctacataattaaaatgtacacatctACTTTATATACATaccatttgattttattatgtacacttaaaaaaattatattgtgGAAGTGTATGTACAACACAGCTTAATGGGTatggtaagaaaataaaaaatgaagaggAATTCTTGTTAGTTTCCTTATTCATTTCAgatattatcattattgaatttatttagACAACTATGTGCCAGGGATATAGCCAGTGATGGAAATGATCCAGACTGCCAGGCCAGGTGTCAAGTGACCACCGGGTATTAAGATTGTTAAATGCAATTCATACGGATGCAGCTGTTTGCAACCTGCTATGTACAGTAGTTTAAAGCATTCGGTGCTGCTTTTGGTATCCCATGTTTTCATATTCCgtgcaatacatatttaatttaaacattgtacGCAAATATAAACACTTGGAACAGACAGCAACACACATCTCTAAGtctgaaaacaatgttaatttaacCAATTCTGCTAAACAAAGTACTTTAAGAAATAGTAATATTactcagtacatttaaaaaacaaatattgatcaGCAGAATGTTTTCAACCATATTTATCTGTCTAGAAATATCATCAATGTTCTGATTaggatatatatgtatacagctctggaaaaaattgagaccactccaagttcagaaatcaatgttaagtggtctcttaattttttccatatatatataaacctgcTTTTCTGTCTTGTCCTCCATGATCATAAAACCCTTGCATGTACCACTGCACATGAAAACAATCAGGATCAGCCCGCTACAATAATCAATCCtgttatttgaaattattattttatgtacagaACGTGGAACAGAGTGAACTGTTTCAGCTGTAAGAAGCAGAAGAGGCTTCAACGTGCAATGGCATAAATGCACATACTACAGTAAATGTACACAGTAGCCAAAGACAAAGGCTTCAGTATAATAAGTGTTGATCAGTCATCTGATCCCTGCATTTGGAAATGATGTCTTGAGTGCCGATCTGGCGTAACAGTTATAAACAGTTCATAGGAAGAAAATCACATCTGAGGGTTTTCTGAAGATATTTGGTAGGGTCACTTCCCAGCCTCATGTGTTCGGATCAAGTATGTACAGCAGGACTGAACATCAGGATTACACTTTCTAATTTTGCTAATAATTACTCATTTCATTCGCTTaacataataaaactaaatagtTAATGCTTCTTGAATAGATACTCATCTGTTTCTTTAAGTGCATTAATGTTGTATACTGTACTGAAGAGGAGAACAAGTTTCAGTTGAGGTCTGTCTTGTTTTACTGTAGTGAATGTTTCCATGAACATCAgtacaaaatgcacacatacacacaaatgcatCTGTGCAGATCCAACACGATAAGAGtgtgattttaaagttttctgaaGTATATGGTTACATTCAAGTAAttctaaatgacaatttctTCTAATCTTATAAATAAGCttaaaaata

Function

GO: NA

KEGG:

id description
K03635 MOCS2B, moaE; molybdopterin synthase catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009994 True 3828 mRNA 0.37 7 8753627 8760035

Neighbor

gene id symbol gene type direction distance location
AMCG00009981 sub1,tcp4,LOC106568402 coding downstream 754078 7995588 ~ 7999549 (-)
AMCG00009978 LOC105901092 coding downstream 1006049 7740664 ~ 7747578 (-)
AMCG00009977 NA coding downstream 1053817 7690903 ~ 7699810 (-)
AMCG00009975 NA coding downstream 1082665 7661052 ~ 7670962 (-)
AMCG00009974 vcp,LOC107708640,LOC103357444 coding downstream 1097451 7644800 ~ 7656176 (-)
AMCG00010001 arl15b,LOC107713334,LOC108433533,LOC107595536 coding upstream 78070 8838105 ~ 8943715 (-)
AMCG00010000 NA coding upstream 272087 9032122 ~ 9057862 (-)
AMCG00010004 tmem175,LOC107744870 coding upstream 445521 9205556 ~ 9216688 (-)
AMCG00010008 NA coding upstream 659829 9419864 ~ 9425212 (-)
AMCG00010011 cssa24h4orf22 coding upstream 779465 9539500 ~ 9544638 (-)
G77050 NA non-coding downstream 53486 8697678 ~ 8700141 (-)
G76959 NA non-coding downstream 723720 8021115 ~ 8029907 (-)
G76937 NA non-coding downstream 859237 7834671 ~ 7894390 (-)
G76833 NA non-coding downstream 1318080 7434691 ~ 7435547 (-)
G76768 NA non-coding downstream 1623529 7129880 ~ 7130098 (-)
G77163 NA non-coding upstream 443355 9203390 ~ 9204115 (-)
G77172 NA non-coding upstream 492223 9252258 ~ 9252590 (-)
G77183 NA non-coding upstream 616144 9376179 ~ 9378011 (-)
G77193 NA non-coding upstream 656409 9416444 ~ 9419356 (-)
G77199 NA non-coding upstream 669473 9429508 ~ 9431648 (-)
AMCG00009989 NA other downstream 432283 8314109 ~ 8321344 (-)
AMCG00009987 NA other downstream 546300 8195735 ~ 8207327 (-)
AMCG00009962 NA other downstream 1463933 7284862 ~ 7289694 (-)
G76762 NA other downstream 1690806 7057805 ~ 7062821 (-)
G76752 LOC101154678 other downstream 1816559 6936718 ~ 6937068 (-)
G77544 NA other upstream 2968468 11728503 ~ 11729165 (-)
AMCG00010082 NA other upstream 4587506 13347541 ~ 13470255 (-)
AMCG00010142 LOC104932682,LOC108255669 other upstream 7449284 16209319 ~ 16224041 (-)
AMCG00010169 cnot6l,LOC107752360 other upstream 8522611 17282646 ~ 17295515 (-)
AMCG00010183 stoml2 other upstream 8713794 17473829 ~ 17478791 (-)

Expression


Co-expression Network