AMCG00010129


Basic Information

Item Value
gene id AMCG00010129
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 15791118 ~ 15797078 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010129
CAGAACTAATATATAAGCAGAGGAACAAGGAAGAAAGGATAGAATACAGAAGACGTAAACTTCTCCCAACCTATGGtcctttcattttgtaaaatgtattaattttaaattgtgtctGTTAGTGTAGTTTAAACCTTTCCACTCATCTAGTTTACATATTGTTTGCTAGGAGTACTGTTTTACTTGCATGACTTTACAGTGCCACCATTTGCAATCTTCGTGGGAAGAGCAGAAGATTTTTAATGGCTCCTGTCCTTGTttggtgtatttattgtattctagGTATTGTACATAGCAAGGCTGGCTGGTCAATATCAACACCAGAGGAGATCTTGGGAGAATTTGGAAAGGATGTCCTCCTACCATGTACCTTTCAACAACCTAAAAATGATTATAAGGGTAACATTGAAGTCATCTGGAGAACAAAAGTTCACTTTGATGGGCCAGTGATCTTCCATTGCGTCAATTCTGCCTCAGCCATGAGTAATTGTTCAGCCCCTTCGACCGAAACATCCAAGATGAGTCGCTACAGTCTGGCAGGAGATGCCAGGCAAAATAATCTGTCTCTGCTGATCAGAAAAGCATCATTCGAGGATAATGATAGTTACTTCTGCCGCGTACAATTAGAGGGAAAAGGAAATTCCTGGGAAACTAAAAGAGGAACAAATCTCAAAGTGCCACCGTTTATTAAACAACTCTACATAAGTGTTGATAGATTTGGGGATCATTCAGTGACGTGTGAAGCAATGGGTCTACCACTGCCAACTATTGTGTGGGTTCAACCCCAAAACCAGAACTTTACTGTGAGAAACAGCAGTGGAAATCAAAGTGTCTCATCAACAGTACCTGCAATTCTGAATGAAACCCACACCTGTCGGGCCAGTAATCTCTTTGGAACCGAGGAACGTTCAATTCATAGAGGTGTGTCGATCACAATCCCAGAAGGAAAACTCAAAATATCGTTTATGGCTCTTTCAGGAATACTTCTTGGAATTGTCATCTTActtgttattgttcttattgtAAAACACCAAGGTTCatcaacaaaacacattaatgttAAGAAGTCATGTCAAAATGACAAAGATGAAAAACCAGGAGGAATCTATATGAATATGCCGAAAAGGACTGTGTGAAAAAGTACGCAAAAGGAGTTAACATTGATCTTCTTTTGTGTCAGTCAAGTTTATCTTAAAATTGTTCtcatatttgaatatatacatattcaaaaaAATGGTattgtgtgcatatatacacagtgcctATAAAAAGTCCCTCATTCAAAAttgtcacattttgttgcctttttgCCTGTAATTCAGATGCATTCAAATTGTTGATTTGTTAATTTTCCTTTATTGACACATCCTATGCTACaatttccaagtgaaaaaatatgcaagaaatgtattaaaaatataaaaccttggcttggttggataagtctATAAGTGTGCTGACTCCCCAGTAAGGGCACTCCAGCCTgggaattaatacaaataattgtggGGGGTACCTTTCCCTGATTGGCCAGATCACTCCCAATAATGCCAATAATGGCTTTGCATATTGATGTGTGattaactttttattaattgaatacaaaaaatgtgtgtacTTTTTCACTCTGAGGTGAACACAGTGTTGTGATGCAGCATTTCCTTCTCATCTTTTTATGTTGTGGCCTTTTCTCATTTCTCATACTCTGAGATGGGGATTTAATCTCcaacacataatacattttcacgTGACACTGGTCGAATGTGAAagagatttctttttttttctttttttttttttctgatatgagactgaattgaaaatgattttgcatgtatatataaaccttTGAACTTATCCATAAAACTTTTATTAAAGATTTTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010129 True 1888 mRNA 0.36 5 15791118 15797078

Neighbor

gene id symbol gene type direction distance location
AMCG00010132 NA coding downstream 55408 15720175 ~ 15735710 (-)
AMCG00010131 NA coding downstream 95292 15676288 ~ 15695826 (-)
AMCG00010133 mccc2,LOC107746845,LOC107719925,LOC107553609,LOC107660263,LOC107680610 coding downstream 117118 15655792 ~ 15674000 (-)
AMCG00010121 NA coding downstream 135753 15654540 ~ 15655365 (-)
AMCG00010123 NA coding downstream 140334 15641043 ~ 15650784 (-)
AMCG00010130 NA coding upstream 123462 15920540 ~ 15929582 (-)
AMCG00010137 NA coding upstream 261435 16058513 ~ 16059187 (-)
AMCG00010143 fbp1b,LOC103033769,LOC107655925,LOC107596168,LOC108426201,LOC101486973 coding upstream 428093 16225171 ~ 16229672 (-)
AMCG00010147 NA coding upstream 855367 16652445 ~ 16663560 (-)
AMCG00010146 NA coding upstream 882167 16679245 ~ 16680222 (-)
G78144 NA non-coding downstream 122 15788763 ~ 15790996 (-)
G78099 NA non-coding downstream 148223 15642157 ~ 15642895 (-)
G78097 NA non-coding downstream 157910 15631648 ~ 15633208 (-)
G78014 NA non-coding downstream 607724 15183112 ~ 15183394 (-)
G77992 NA non-coding downstream 713273 15077590 ~ 15077845 (-)
G78190 NA non-coding upstream 235011 16032089 ~ 16032382 (-)
G78226 NA non-coding upstream 435328 16232406 ~ 16236788 (-)
G78365 NA non-coding upstream 1390941 17188019 ~ 17188849 (-)
G78422 NA non-coding upstream 1500364 17297442 ~ 17298204 (-)
G78428 NA non-coding upstream 1507902 17304980 ~ 17305651 (-)
AMCG00010082 NA other downstream 2320863 13347541 ~ 13470255 (-)
G77544 NA other downstream 4061953 11728503 ~ 11729165 (-)
AMCG00009989 NA other downstream 7469774 8314109 ~ 8321344 (-)
AMCG00009987 NA other downstream 7583791 8195735 ~ 8207327 (-)
AMCG00009962 NA other downstream 8501424 7284862 ~ 7289694 (-)
AMCG00010142 LOC104932682,LOC108255669 other upstream 412241 16209319 ~ 16224041 (-)
AMCG00010169 cnot6l,LOC107752360 other upstream 1485568 17282646 ~ 17295515 (-)
AMCG00010183 stoml2 other upstream 1676751 17473829 ~ 17478791 (-)
AMCG00010188 NA other upstream 2043629 17840707 ~ 17844389 (-)
AMCG00010190 NA other upstream 2055789 17852867 ~ 17855821 (-)

Expression


Co-expression Network