Gene
RNA
| Item | Value |
|---|---|
| gene id | G78226 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 16232406 ~ 16236788 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: sodium- and chloride-dependent GABA transporter 3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU97597 | True | 279 | lncRNA | 0.60 | 2 | 16232406 | 16236788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010143 | fbp1b,LOC103033769,LOC107655925,LOC107596168,LOC108426201,LOC101486973 | coding | downstream | 2734 | 16225171 ~ 16229672 (-) |
| AMCG00010137 | NA | coding | downstream | 173219 | 16058513 ~ 16059187 (-) |
| AMCG00010130 | NA | coding | downstream | 302824 | 15920540 ~ 15929582 (-) |
| AMCG00010129 | NA | coding | downstream | 435328 | 15791118 ~ 15797078 (-) |
| AMCG00010132 | NA | coding | downstream | 496696 | 15720175 ~ 15735710 (-) |
| AMCG00010147 | NA | coding | upstream | 415657 | 16652445 ~ 16663560 (-) |
| AMCG00010146 | NA | coding | upstream | 442457 | 16679245 ~ 16680222 (-) |
| AMCG00010148 | NA | coding | upstream | 459095 | 16695883 ~ 16696863 (-) |
| AMCG00010149 | NA | coding | upstream | 460079 | 16696867 ~ 16700248 (-) |
| AMCG00010150 | NA | coding | upstream | 528076 | 16764864 ~ 16766453 (-) |
| G78190 | NA | non-coding | downstream | 200024 | 16032089 ~ 16032382 (-) |
| G78144 | NA | non-coding | downstream | 441410 | 15788763 ~ 15790996 (-) |
| G78099 | NA | non-coding | downstream | 589511 | 15642157 ~ 15642895 (-) |
| G78097 | NA | non-coding | downstream | 599198 | 15631648 ~ 15633208 (-) |
| G78014 | NA | non-coding | downstream | 1049012 | 15183112 ~ 15183394 (-) |
| G78365 | NA | non-coding | upstream | 951231 | 17188019 ~ 17188849 (-) |
| G78422 | NA | non-coding | upstream | 1060654 | 17297442 ~ 17298204 (-) |
| G78428 | NA | non-coding | upstream | 1068192 | 17304980 ~ 17305651 (-) |
| G78429 | NA | non-coding | upstream | 1069589 | 17306377 ~ 17307001 (-) |
| G78430 | NA | non-coding | upstream | 1071062 | 17307850 ~ 17308266 (-) |
| AMCG00010142 | LOC104932682,LOC108255669 | other | downstream | 8365 | 16209319 ~ 16224041 (-) |
| AMCG00010082 | NA | other | downstream | 2762151 | 13347541 ~ 13470255 (-) |
| G77544 | NA | other | downstream | 4503241 | 11728503 ~ 11729165 (-) |
| AMCG00009989 | NA | other | downstream | 7911062 | 8314109 ~ 8321344 (-) |
| AMCG00009987 | NA | other | downstream | 8025079 | 8195735 ~ 8207327 (-) |
| AMCG00010169 | cnot6l,LOC107752360 | other | upstream | 1045858 | 17282646 ~ 17295515 (-) |
| AMCG00010183 | stoml2 | other | upstream | 1237041 | 17473829 ~ 17478791 (-) |
| AMCG00010188 | NA | other | upstream | 1603919 | 17840707 ~ 17844389 (-) |
| AMCG00010190 | NA | other | upstream | 1616079 | 17852867 ~ 17855821 (-) |
| G78610 | NA | other | upstream | 1708447 | 17945235 ~ 17945761 (-) |
