G78429


Basic Information

Item Value
gene id G78429
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17306377 ~ 17307001 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97847
acacttcTACATGTCCTTTGAGAAGATACATTTCACcagattattgtgtttttttattgcaccAAAAcctctgcactgcactgaagGTACAAGTtaccttttctttgtttttctagttCTCGGTTCTCAGTCACAATATCAGCAACATGTCTCCCATGATTCTCTGCCAAGTGCCTCATTTGTGTCTCACGGGAATGGATCCAGTTCACTCTGGAGCTCTGACCTCCctaaacagagaaagaaagagagcgTGCCAGTGAGAGAGTAAAGCAGATCGAGAGAACAATAATTGACAATCCAAAGAAAGAACGgaggaatgaaaaaaaagagattCCACTGCGAAACATTTGACGTGCCCTTTGAACTTATTCTCTCCGACCATTTTCTTCCAGAAGGTTTTTGCGTTATATTGTTGTTGACTTGACAATTCTCTGTGCATATGCATTGTGTTGAAGAATATGTGCAGCTCTGTACTTACTGGGTCACTGGAGGGTTTCAAACTGTGGACAAGCTCTCGAGCTTCGTGCTGGGATTGCCTCTCTCTGTTCTCCATTTCATGAAGCAACTGTCTCTCACGCATCTGATGAAGCTTTCTCTGCCCCTCGCGCCTCTTCTTATAGTCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97847 True 625 lncRNA 0.43 1 17306377 17307001

Neighbor

gene id symbol gene type direction distance location
AMCG00010159 rufy3,LOC107553597 coding downstream 93093 17194002 ~ 17213284 (-)
AMCG00010157 mob1b,LOC107746863,LOC103036920,LOC107585392 coding downstream 119439 17168595 ~ 17186938 (-)
AMCG00010156 dck coding downstream 139223 17152905 ~ 17167154 (-)
AMCG00010158 slc4a4 coding downstream 157628 17125229 ~ 17148749 (-)
AMCG00010155 NA coding downstream 196331 17054873 ~ 17110046 (-)
AMCG00010172 NA coding upstream 36277 17343278 ~ 17343902 (-)
AMCG00010171 NA coding upstream 38265 17345266 ~ 17345562 (-)
AMCG00010170 NA coding upstream 46152 17353153 ~ 17353449 (-)
AMCG00010179 NA coding upstream 73187 17380188 ~ 17388056 (-)
AMCG00010178 NA coding upstream 88136 17395137 ~ 17403507 (-)
G78428 NA non-coding downstream 726 17304980 ~ 17305651 (-)
G78422 NA non-coding downstream 8173 17297442 ~ 17298204 (-)
G78365 NA non-coding downstream 117528 17188019 ~ 17188849 (-)
G78226 NA non-coding downstream 1069589 16232406 ~ 16236788 (-)
G78190 NA non-coding downstream 1273995 16032089 ~ 16032382 (-)
G78430 NA non-coding upstream 849 17307850 ~ 17308266 (-)
G78431 NA non-coding upstream 1709 17308710 ~ 17308916 (-)
G78432 NA non-coding upstream 2581 17309582 ~ 17309971 (-)
G78433 NA non-coding upstream 3161 17310162 ~ 17310517 (-)
G78434 NA non-coding upstream 65800 17372801 ~ 17375304 (-)
AMCG00010169 cnot6l,LOC107752360 other downstream 10862 17282646 ~ 17295515 (-)
AMCG00010142 LOC104932682,LOC108255669 other downstream 1082336 16209319 ~ 16224041 (-)
AMCG00010082 NA other downstream 3836122 13347541 ~ 13470255 (-)
G77544 NA other downstream 5577212 11728503 ~ 11729165 (-)
AMCG00009989 NA other downstream 8985033 8314109 ~ 8321344 (-)
AMCG00010183 stoml2 other upstream 166828 17473829 ~ 17478791 (-)
AMCG00010188 NA other upstream 533706 17840707 ~ 17844389 (-)
AMCG00010190 NA other upstream 545866 17852867 ~ 17855821 (-)
G78610 NA other upstream 638234 17945235 ~ 17945761 (-)
AMCG00010206 NA other upstream 1556267 18863268 ~ 18872082 (-)

Expression


Co-expression Network