Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010172 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 17343278 ~ 17343902 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K06087 | CLDN; claudin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010172 | True | 606 | mRNA | 0.49 | 2 | 17343278 | 17343902 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010159 | rufy3,LOC107553597 | coding | downstream | 129994 | 17194002 ~ 17213284 (-) |
| AMCG00010157 | mob1b,LOC107746863,LOC103036920,LOC107585392 | coding | downstream | 156340 | 17168595 ~ 17186938 (-) |
| AMCG00010156 | dck | coding | downstream | 176124 | 17152905 ~ 17167154 (-) |
| AMCG00010158 | slc4a4 | coding | downstream | 194529 | 17125229 ~ 17148749 (-) |
| AMCG00010155 | NA | coding | downstream | 233232 | 17054873 ~ 17110046 (-) |
| AMCG00010171 | NA | coding | upstream | 1364 | 17345266 ~ 17345562 (-) |
| AMCG00010170 | NA | coding | upstream | 9251 | 17353153 ~ 17353449 (-) |
| AMCG00010179 | NA | coding | upstream | 36286 | 17380188 ~ 17388056 (-) |
| AMCG00010178 | NA | coding | upstream | 51235 | 17395137 ~ 17403507 (-) |
| AMCG00010180 | NA | coding | upstream | 96281 | 17440183 ~ 17452488 (-) |
| G78433 | NA | non-coding | downstream | 32761 | 17310162 ~ 17310517 (-) |
| G78432 | NA | non-coding | downstream | 33307 | 17309582 ~ 17309971 (-) |
| G78431 | NA | non-coding | downstream | 34362 | 17308710 ~ 17308916 (-) |
| G78430 | NA | non-coding | downstream | 35012 | 17307850 ~ 17308266 (-) |
| G78429 | NA | non-coding | downstream | 36277 | 17306377 ~ 17307001 (-) |
| G78434 | NA | non-coding | upstream | 28899 | 17372801 ~ 17375304 (-) |
| G78468 | NA | non-coding | upstream | 60504 | 17404406 ~ 17405317 (-) |
| G78470 | NA | non-coding | upstream | 64089 | 17407991 ~ 17408199 (-) |
| G78508 | NA | non-coding | upstream | 114042 | 17457944 ~ 17458473 (-) |
| G78509 | NA | non-coding | upstream | 114987 | 17458889 ~ 17460504 (-) |
| AMCG00010169 | cnot6l,LOC107752360 | other | downstream | 47763 | 17282646 ~ 17295515 (-) |
| AMCG00010142 | LOC104932682,LOC108255669 | other | downstream | 1119237 | 16209319 ~ 16224041 (-) |
| AMCG00010082 | NA | other | downstream | 3873023 | 13347541 ~ 13470255 (-) |
| G77544 | NA | other | downstream | 5614113 | 11728503 ~ 11729165 (-) |
| AMCG00009989 | NA | other | downstream | 9021934 | 8314109 ~ 8321344 (-) |
| AMCG00010183 | stoml2 | other | upstream | 129927 | 17473829 ~ 17478791 (-) |
| AMCG00010188 | NA | other | upstream | 496805 | 17840707 ~ 17844389 (-) |
| AMCG00010190 | NA | other | upstream | 508965 | 17852867 ~ 17855821 (-) |
| G78610 | NA | other | upstream | 601333 | 17945235 ~ 17945761 (-) |
| AMCG00010206 | NA | other | upstream | 1519366 | 18863268 ~ 18872082 (-) |
