Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010171 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 17345266 ~ 17345562 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko00603 | Glycosphingolipid biosynthesis - globo and isoglobo series |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010171 | True | 297 | mRNA | 0.65 | 1 | 17345266 | 17345562 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010172 | NA | coding | downstream | 1364 | 17343278 ~ 17343902 (-) |
| AMCG00010159 | rufy3,LOC107553597 | coding | downstream | 131982 | 17194002 ~ 17213284 (-) |
| AMCG00010157 | mob1b,LOC107746863,LOC103036920,LOC107585392 | coding | downstream | 158328 | 17168595 ~ 17186938 (-) |
| AMCG00010156 | dck | coding | downstream | 178112 | 17152905 ~ 17167154 (-) |
| AMCG00010158 | slc4a4 | coding | downstream | 196517 | 17125229 ~ 17148749 (-) |
| AMCG00010170 | NA | coding | upstream | 7591 | 17353153 ~ 17353449 (-) |
| AMCG00010179 | NA | coding | upstream | 34626 | 17380188 ~ 17388056 (-) |
| AMCG00010178 | NA | coding | upstream | 49575 | 17395137 ~ 17403507 (-) |
| AMCG00010180 | NA | coding | upstream | 94621 | 17440183 ~ 17452488 (-) |
| AMCG00010182 | NA | coding | upstream | 119550 | 17465112 ~ 17473608 (-) |
| G78433 | NA | non-coding | downstream | 34749 | 17310162 ~ 17310517 (-) |
| G78432 | NA | non-coding | downstream | 35295 | 17309582 ~ 17309971 (-) |
| G78431 | NA | non-coding | downstream | 36350 | 17308710 ~ 17308916 (-) |
| G78430 | NA | non-coding | downstream | 37000 | 17307850 ~ 17308266 (-) |
| G78429 | NA | non-coding | downstream | 38265 | 17306377 ~ 17307001 (-) |
| G78434 | NA | non-coding | upstream | 27239 | 17372801 ~ 17375304 (-) |
| G78468 | NA | non-coding | upstream | 58844 | 17404406 ~ 17405317 (-) |
| G78470 | NA | non-coding | upstream | 62429 | 17407991 ~ 17408199 (-) |
| G78508 | NA | non-coding | upstream | 112382 | 17457944 ~ 17458473 (-) |
| G78509 | NA | non-coding | upstream | 113327 | 17458889 ~ 17460504 (-) |
| AMCG00010169 | cnot6l,LOC107752360 | other | downstream | 49751 | 17282646 ~ 17295515 (-) |
| AMCG00010142 | LOC104932682,LOC108255669 | other | downstream | 1121225 | 16209319 ~ 16224041 (-) |
| AMCG00010082 | NA | other | downstream | 3875011 | 13347541 ~ 13470255 (-) |
| G77544 | NA | other | downstream | 5616101 | 11728503 ~ 11729165 (-) |
| AMCG00009989 | NA | other | downstream | 9023922 | 8314109 ~ 8321344 (-) |
| AMCG00010183 | stoml2 | other | upstream | 128267 | 17473829 ~ 17478791 (-) |
| AMCG00010188 | NA | other | upstream | 495145 | 17840707 ~ 17844389 (-) |
| AMCG00010190 | NA | other | upstream | 507305 | 17852867 ~ 17855821 (-) |
| G78610 | NA | other | upstream | 599673 | 17945235 ~ 17945761 (-) |
| AMCG00010206 | NA | other | upstream | 1517706 | 18863268 ~ 18872082 (-) |
