AMCG00010195


Basic Information

Item Value
gene id AMCG00010195
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 18074932 ~ 18111982 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010195
TTGAGGTGTAGTGACGGGTCTGCAGCGCTTCCTCGGGACGATGCCAGCGCCACACAGGAGCGGGCCCGGGAAAGCCAAGCAGGTCTCAAACCAAGTGCAAGCCCACACAACAAAGGCTGCTCCTCTAAAGCTTACAAAAGCTACAAGCAAGAAGAAGGATGAAGATGATGGAACAGAGATGGGGGATGGGACAGAGGAGTGGATGCAAGGAAAGACCCTCATCAAACCACCGGACCAACTGGATCTCACCGAAGCTGAGCTGAAAGAGGAGTTCACACGGATCCTGACAGCGAACAACCCCCATGCACCTCAGAACATCGTCCGCTACAGTTTCAAAGAACGGGCATACAAACCAATCAGCAGTGTCGACCAACTGGCTGTCCACTTCTCACTCAATGGGCATATGCTACACAAAGACTCTGATGAAGCCAGGAGACAAAGAGCCAAGCAGGATGTCTCAGAAGAAATGAGCCCTGCCGAGTCCACCGCAGCAGAGACCGAGGAGGATAAGCCAGCTGGTGGGGAGGAGTCAGGGGAAGCGGAGGAAGGAGGCGGCGGGGAGCGTACGGAGAGCGCCGAAAGCACGACCAAGAAGGACCAGAAAGTCACCAATCAGTTTAACTTCAGTGAGAGAGCCTCCCAGACACTGAACAACCCTCTCAGGgaaAGAGGATCGCAGACCGAGCCGCCTCCCAGAGCAAACTTCTCAGCCACAGCCAATCAGTGGAAAATCTACGATTCGTATCTTGAGGAGCTGGAGAAGCAGGAGAAAAACAAGGAGAAGCAAAAGGCCACCCCTACGAAaaaggaggaggggaaaaacaagaagaaatcGATGGTGATTGAGACTCAGAGTGATGACATCACTAAGGTGGGCAAGGTAGCCAAGATCATCGAAAGAATGGTGAACCAGAACACATTTGATGACATTGCACAAGatttcaaatattttgaagatGCTTCTGATGAATTCAGGGAACAAGAGGGCACTCTGCTCCCGCTGTGGAAATTCCAGTATGATAAAGCTAAAAGACTGGCAGGCCACGGCATGCTGCTATTCTACAGCCTCAAGAACTCCACGTTCCCGGAGTACAGCTTCCCCACAGACAGTGGCGTGATGTGCCTGGACATCCACCCAATCTGCCCATACATGGTGGTCGTGGGCTTCTACGATGGCAACGTGGCCGTGTACAATCTGAAGGAGGAGGGCGAGCAGCCGGCATATAAGAGCACAGCAAACACTGGCAAACACACCGACCCCGTCTGgcagGTGAAATGGCAAAAAGACGACATGGATAACAATCATAATTTGTTCTCCGTTTCCTCTGATGGGCGAGTGGTGTCCTGGACTCTTGTGAAGAATGAGCTGGTTTTCACAGATATCATCAGGCTGTCTGGGGAAGGAGCGGTGACGGACGGGCCTGAGGGGCTACAGCTACAAACCATGGCATGTGGAACTTCCTTTGACTTCCATAAACAAATTGATTACCTCTTCCTGGTTGGGACGGAGGAAGGAAAAATACACAAGTGTTCGAAAGCCTATTCCAGCCAGTTCCTGGAGACCTATCATGCCCACAACATGGCCGTGGATACTTTGCGCTGGAACCATTTCCACTCCAAAGTCTTCATTTCCTGCAGCTCTGACTGGACTGTGAAGATCTGGGACCACACCGTAAAGACTCCGATGTTCACCTTTGACCTGAACGCCCCTGTGGGAGATGTGGCCTGGTCTCCTTACTCCTCCACCGTCTTTGCTGCCGTCACCACAGATGGCAAGGTGCATGTGTTTGACTTGAGTGTCAATAAGTACGAGGCCATCTGTGAGCAGCCCGTGGTGGCCAAGAAGAAGACCAAGCTAACGCACATCGAGTTCAACCCGGTCCACCCCATCATCATTGTGGGAGATGACCGAGGATGCGTCACCAGTCTGAAGCTGTCACCCAACCTGCGCAAGAAGCCCAAGGAGAAGAAAGGGCAGGAGACTCCCAAGGGCCCAGAGGTGGAAATTGCCAAGATGGAGAAACTCTTGAGCTTAGTGAGGGAGCCAGACAACTCCAGCAAGAACTGAAGAGGCAGCCAAGAAGCACAGACGAGTCCCACAGGCAATTTGTAAAGAAAGCAAAGTATATGCATGTAATTAAAGAATGCAGAAGAGAAAATCAACAACAgcgtatttaatattttattttgtaatttaaaaaaaaaagcaaaaatgtaatgtatttaatgcttttagACAGTACATTAAAAAGCTTTTGCACTATtcatttttagtattattattgttattattcccTACACATAGAAACCAACAAACTGTTTCTCAGgattaataattgattaaaacCAAGTTCATATTCCAATGAATgagaaaatagatttaaaaataaaactaaatttatGAAAAAGCTTTATCAGAAagatattttttctattattattttgtttctatctAACTTACAATGCCATATTTTCAACAATGAAGTGGAAAACAATCAATCTTTAATAATTTCAAACATTCTAATGTTTGATGGGGTTAAATCAGAAtctgataattaaaatatcGGATTTCATTATTTGACTATTATTTTTGaggttattttgtattgaagaAACTAGGGAATGTAGTACCTCACTACAAGATAAACTTTTGAGGATTTTTGTTGCTGTTCCCTCACACCTAAGAacgaacaattattttattatgagaCACATGTCCCACAATATGTATCAATGAAATTTCACCCAAGCACAAATCaaaccatattttttttaataataaaaaaggtattGTGATGgaaatactaatataatattaaaaaaaaaaaaatacccttcCTCTGTTTTTTGGAATAGTCAAAAACCTTTTGGAATAGAGCAAGATTTGGAAGCATTTGGGTCAGTGGTTTGCAGTTTTGTGGAAGTACAATGTGCCAATCTCTGTCAGTATGGAAACCCAGTCTAGTGCCTGCTATCAAAGTAGAACCTCCACATGTAGGCATCTTAATGTTTTACGTCCCTCTTGCCTTGCCAATGCTGTTGTACAGATCTTTTCAGAGGGTTGTATGTGACAGCTGACTCCTAGAAGAAACGTCCGTCTGATCCTCATGATTCAGTGAAAAACACTACCTAACAAGCAGGAAGGGGCTGAACAGACTCCTCTTTATTTTTTAGCTTTTATATTCTCACAAATGATTccaaagttaaattaatatcCTTCCTGCTGTGCTGTTTAAAGATTAACTAGGGTGAACAGGCCTCTGGGAGTAAACATACAGACTCCCTGTGGCAATGTGGTCACCATAAGATCAGGTTTTCACACAGTCAGATATCTAGAGATGGACTCCTCTGTAAGTCAGTGCTTTAGATCTCATGTATTATTTTGCTAGACCACACATCTCCAGTTGACTCATTATGTATACACTCCATGTGGCTATGGCAGGCCAATGTGATAAAGTGGCAGCTAGGAAGATGTGCTGAAGGTGGTTAGGGGTTCAGCAGCTTTCCCTCCATCCCTACGTTCCATCTGCCCTGAACTTTTCAGAAGGACTGTGGATTTAAGATTGGCCAATCATCAGACCTCCTGAAAAGAGTACTTTGCCCTAAATCGATAGATTTAAAGAGCATGGGTTTTTACACCTTCTTTATACTCCAGACATTGCGGTTAAGGTAGTCCATGCAGCTGATCACTGCAAGACCCAGGTCAAGGCTTTGGGGACACAGTGCTAACGTGATCTCGACCACTAAGGTCTCTCTGTATAAATATTGCATACTAAATATACCTAATTGGGATGCAGCCACCACCCCAGTCTACCAGCACTCCTGTATACTCAATCCCCTTGTGATTGGTAAAAGCTGTGCTAAAGAAATGCATATTCCATGGTGGCATTTCCTGATgaacttaaaagaaaaacagatatgGATATTAAATCCAGCAGGTCTAAGGCAGCTGTCTGGTTTATGAAAGCCAAGTTAGGAAAACATATTGAGCCTTGGCAGAATGGAAGTGCAGACATCAGAGATTCTTTGTTAGGGCGTCAGCaagtatttttgttcattttttttctgttcttgtcCTGTAGCCAAGACGGGAACCTTCTCCTGGTTAGAGGGGACCTTGCAGGCTTTGTACAAGATCACAAACAGGATGAAAATCAAAATAGCCACCAAAGAGTTACAGACAATGGCCACAATGGCCCCTGTGGAGAGTCCTGTGCTCACACCAGACTCCATGAGGAACAAAGAGCCTGGTCCACAGATTCCAGAGAGAGGATTACAGAAAGTGCTTGAGTCCTCAAGGGGCGGACAGACAGAAATGTATTCCACTCCAGCACACATGCACAGGATTAGAAGAACTAGATATTAAAGATGCTGCACTCCAATGCTGTCTCAATCCATGTGTGTTAATTATGAAGATTGTTCTCTAGCGTATCTTCAGTTCGGTTCACTTTAGCTGTGTCTCTTTCCTTTGTGTATTTCTATACTTCCTGGTCAGTGTATTCTGGATGTTCTTGGGCTGTACAACTGCATGTACAATTGTCGACCATGAAGGAAACCATGTGGCTCTTAGTTGCATAACCATTCACGAACTTTGCTCTAGGACATATTCTGCACAGGCTTCAATCAAAGCATTATTTTCTCATCCCTGTACTCTGGAGGGAGCCCAcaaaaatgttctgcttttgACTTTTATCCCAGCTTATAGACCAAatagatgaatgaatgaagctACAGAGGAATGGTCAGGGCAGCTGTGCTTCCCCTTCTGTGCTGAAGACAGTGCCTCTTTGTacttct

Function

GO: NA

KEGG:

id description
K10409 DNAI1; dynein intermediate chain 1, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010195 True 4797 mRNA 0.44 19 18074932 18111982

Neighbor

gene id symbol gene type direction distance location
AMCG00010189 NA coding downstream 249440 17822669 ~ 17825492 (-)
AMCG00010181 fam214b,LOC103397924 coding downstream 581144 17483505 ~ 17493788 (-)
AMCG00010182 NA coding downstream 601324 17465112 ~ 17473608 (-)
AMCG00010180 NA coding downstream 622444 17440183 ~ 17452488 (-)
AMCG00010178 NA coding downstream 671425 17395137 ~ 17403507 (-)
AMCG00010196 NA coding upstream 3532 18115514 ~ 18126029 (-)
AMCG00010205 NA coding upstream 712423 18824405 ~ 18850929 (-)
AMCG00010209 LOC103366656,LOC100696291,LOC101467343,LOC102289343 coding upstream 771428 18883410 ~ 18903519 (-)
AMCG00010208 NA coding upstream 809307 18921289 ~ 18924380 (-)
AMCG00010207 LOC107665242 coding upstream 817550 18929532 ~ 18952982 (-)
G78616 NA non-coding downstream 98867 17973503 ~ 17976065 (-)
G78615 NA non-coding downstream 105091 17969640 ~ 17969841 (-)
G78614 NA non-coding downstream 105564 17969169 ~ 17969368 (-)
G78609 NA non-coding downstream 138355 17936122 ~ 17936577 (-)
G78600 NA non-coding downstream 253760 17817560 ~ 17821172 (-)
G78661 NA non-coding upstream 65595 18177577 ~ 18183301 (-)
G78761 NA non-coding upstream 859381 18971363 ~ 18971627 (-)
G78767 NA non-coding upstream 882191 18994173 ~ 18994596 (-)
G78773 NA non-coding upstream 894234 19006216 ~ 19010234 (-)
G78815 NA non-coding upstream 1028814 19140796 ~ 19141036 (-)
G78610 NA other downstream 129171 17945235 ~ 17945761 (-)
AMCG00010190 NA other downstream 219111 17852867 ~ 17855821 (-)
AMCG00010188 NA other downstream 230543 17840707 ~ 17844389 (-)
AMCG00010183 stoml2 other downstream 596141 17473829 ~ 17478791 (-)
AMCG00010169 cnot6l,LOC107752360 other downstream 779417 17282646 ~ 17295515 (-)
AMCG00010206 NA other upstream 751286 18863268 ~ 18872082 (-)
AMCG00010234 hint2,LOC106585387,LOC107720264,LOC103469931 other upstream 2076676 20188658 ~ 20195384 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other upstream 2819189 20931171 ~ 20941393 (-)
AMCG00010247 NA other upstream 2941642 21053624 ~ 21081825 (-)
AMCG00010262 shc3 other upstream 3429037 21541019 ~ 21572512 (-)

Expression


Co-expression Network