AMCG00010181 (fam214b,LOC103397924)


Basic Information

Item Value
gene id AMCG00010181
gene name fam214b,LOC103397924
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17483505 ~ 17493788 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010181
ATGCAACAACCTTTGTGGACTGAATCCACCGAGGGTGTGTGTCGTGGGGCTGTGCTGATCCTGCACGCCCCCCTGCCCTGTGCCAGCCAGTCCTGGCATGGTGTTGGTGGCTCAGCCAGGACGTGCTGGCAGCTGTGGGGATGGACGGGCTCCTGGGGTAGCAGCAGAGGGCCGAACGCCAGTCCTGAGTTGCAGGGGGCAGGAGAGGAGTCTCCGGTGGAACTGCCAGCGCAGGAGGGGGACCTGCCACCCCCGAGCACCCAGACAGGAGGCCTGGACTCGGGACCCGGCCAGGGGCTCCTCAGGCCCTTTGGAGAAAATGAGATCAAACTGCAGAAGGTGTACCAGCTCTCCATCTTCTCCCAGTTGGGGGGTTTCTCGGACAGTGGAGGCCAGCAGACGGTGGGGAAGCAGGGTGGAAAGAGGAGCCTGGCAGAACCCTTCTCTGAGCACAAGCGCCCGCGTTTGCCTGGTCATGGTGTGGCCGCTTGGCCAGATTCCCCTCGGCTCCCAGAGCAGCTGGACACCGATTCTGATCAAGAGCTCCCCTCAGACGCGCTGCAGGACGAGACCGCGCTGGTGTGCAGCACTGGGCAGCACTTCTCCCACACGGGCATGTGTGTGATCGAGCACAGAGACTGCGCCCCGGGCCGGGTGCAGGACAGCAGGGCAGGGAGGACCCCCCACCCTCTGCTCCCCGCTGGCCCTGCAGCCAGAAGGCTTTTAGAGCACAAGCAGGACAGGCATGTCCAAAATGGGGACGGGCTGTCCCCCAAACCCCATCACTTCTCTTCCACTAGGACTCCGGCCGCCACACAGCTCTCTGATGTCTCTCTTGTGGCCAGCCTGCCAAGGACTGAGACCAAGCCAGCAGGGCAGTCAGCAGACAGCGCTCCTGCAGAGCAGAGGAGAGGGGGCTCAGCACAACTGCCCAACGGAGGCTTAAAGGAGCAAACCCCCAGCTGTACAGAGCGCAGGACGGACAGTGCCGAGGACCCCGATGACAGGGAGGTGTCTCCTGTTAAAGCTGTGTTAGGGGAGGGTGAAGGGGACACTGTTGAGCTGTCCCCCCCAGGGGCGGAGCAACCCCAGGCTTCTTCCACTAACGGCCTGGCTTCCTCTGAGAAGACGCCTTGCTGCTCAAAGCAGCTGGGCCCCTTGTCTACCCCTGGTCCAAGTGGTTGCCCTGCCAAGAGGAAGCTGCTGGCCTCCAGTGACACGGGCGAGTCATGCTCTGAGGACGAGGGCCCCTCCACTTCCAAGAGGAGCCGGCTGTGTCTGCCTCATGGCTTTACCGTGTCCTGCCGCAGCACCGACGCCAAGGCCGCCCCGTTCTGGAACCACCTCCTGCCCTCTGCCCGGGACCGGCCCAAGAGCTCAACAGATTGCACTAGTGTGGGAAGGAGACTGAAGAGCGGACTTCGGCTAAAATCGAGGCAGCTCCGCAGTGCCTGGCGAGGAGATGCCAGCCGTGCCTCCCGTTCCAGCTGGCCCTCCGCCTCCATCAGCCGCTCCCTGTTGGGCAACTTCGAGGAATCAATCCTGAAGGGTCGTTTTGCCCCGTCTGGTCGCATTGAGGGCTTCACAGCGGAGATTGGTGCCAGTGGCTCCTACTGCCCTCAGCACGCTACCCTACCTGTGGAGGTCACCTACTACGACACCTCCGAACACAGcgccccctccccctttctGGGTGTGATCCATCTGGAGCTTCTGGGAAAGAAGGGATACAGCGTTCCAAAAGCAGGGACCATCCAAGTGACCTTATTCAACCCCAACAAGACTGTGGTGAAGATGTTCCTGGTGACGTATAACTTCGGGGACATGCCTGTAAACCATGTGACCTTCCTGCGCCATCGAATCTTCCTGGTGCCcgtggaggagggagaggggcaggcGGGGCAGCCTgagggcggggccacagacaGGAAGAGAATACTCTGCTACTTGATACACCTCAGATTCCAGAGCTCAAAATCTGGGAAAATTTACTTGCACGATGATATCCGGCTGCTATTCTCCCGAAAATCCATCGAGGTGGACACTGGGATCCCCTATGAGTTGAAATCCTTCACCGAGGTGCCAAGAAACCCCAAGTACTCTCCCCGGGTCTGACACCTGCCGTCTCGCTGCCTTCTGGAAGGACAGACACGAGACGGACAGAGACCCGACTAAACACGAACCCAAATGGAAACTTGAAAGGCGacaacacaagcaaacaaagaaaatgccaACAAGAAGCACCATAAACGGAAAGACACAAACTGTTTCTGAATTCAGTGTTAACATGCATGCCTTGTAACAAACCTCCGAGTTCTCTTCTagtgtgattaaaaaaatttCTCCCTGTCTTCACCCCCGCTGGACCACACCCCCCCCATGTGGACCAATGGAACAGCTGACAGCAGTGACAAATTAACATAAAGGCCCCCACTGATCTACATTGTGGTATCTGAGAGCACTCATCCAATGCATAATCCCTCTTCTGGAAGAGCCAATTTGAACCGCATCTCCTCTTGCCCCCACCTGGTTGTGATCCATTCATGCAATTACATATCGTTCTTCACTAAGAGTGGGGAAAAAGTTTGGAAAAATGTTAGGTTTGAGTGTTTGATATTGTGGAGGGTTTACACAGAGCTGGGGCTCCTCAGAAGATGAAGCTGTTGTGCATGAGGGAGAataaaagagaggaagagaccCACCTGAAGACTCAAACCAAAGGAGTAGcaacaataacataaacaaggaaaaactaaaatcccaATTCCAATAAAGCTGCTAAAACTTTCAGTCAAGAGGTACCTGACGTCTGATTCACAAACGCAGGAGGAAATGCTGAGTAGTAAGACCTCTAACCCACTGCCAGAGGACCGCAGGTGTGTAGGGACAACCTTATGTGTTACTCAGTGCTGTTGCTTTAGTTATTTGCTGAGCTATGGCCCACACATCTTCTGACCTGTCTACACCGAACAGACCACTTCCTTACACCTGCATGGAGCCTTGTGTGAGTTTGGTCCCCAATGAcgttcaaagaaaaataatagtactttaaaaaacctaaaaatacagtgtaaacTTCAATACAATCCTGTGTTTTGAGTAACCACCACACAGCATTGTGCAAATTCTACAAAAAGAAGTGCAAATTCAGGATGAAATGACTGAGTTTCTAGCCaaagtttctgttctgttttatttgtgtgtgcgtgcttgtgtgtgtaatgGAGTTCCAATAGCAAATACCGTGATGTCTGAATATAAGTAGACATTGTCTGAAAGCTGAACTATAAGCTCCCCGAAATGGTACGATTTAGAAATTATAAAGAGGTTTGATTTCTTGCTCTGGCAATTTTAACCAGGCTAGAGTAAAGGAAGAGAGGGTCTGTGGACTGCTTTGTAAAGTCCTTGGCCATGATGCGATGGGATAACTATACTTGGCACCGGACAACTGGGGAGGAGAAAAGACTGGCAGACACCCGGCTTGGTCCATAGCTCTCCTGCAGCAGGATTGCACTGGCTGAAGTGGAGGTTGCAGTCAAAAGAAAGGTGCTGGAAAACGACCCACAAATCAAACGCACAAGACGCAAAACCCTCCTCCTGGATGAAGAAGTGATTCAAAGTCTGGGGAATGCAGAAAAACCTATAGGAGCAGCCATGTAACTGGTCAACATCTTTAGTGTGGCAGTGCGAGAGATGTGTTGAACTGTAGCACGATCGTCATATTGCCGAGAATCtcaaatgttgaaatgttagGCATAAGAATACTACGCTCTTATCTTGCCTACAAGTTTGGAGAACAGAGTGAAATTGATGATTTGACAGCACCATTTGTGTTGACACAAGTACAACCCAACTGTTTTAAAGGAGGGTGCGGATGTCAGATTGGACATTGAGAACTCCTGCTTGGTCCCCGGGGGAGACCGTTATGTTAACTCTGTGTTTAGAGCATTCTGTTAACAGTCTgagttaggaaaaaaaaaacggaacTAAAAATGAgtagtatttaatttatttacagatgtCTTAAAGCAATATGCTGTGCATTAGGGGTGTGATTTTGTGAGCACAGTAGCTGTGGCTATTGTCTACCAGCTATGTACAGTAAGGATGGTCATTCAATGACCTGTGGAAAGAGGGG

Function

symbol description
fam214b Orthologous to human FAM214B (family with sequence similarity 214 member B).

NR:

description
PREDICTED: protein FAM214B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010181 True 4138 mRNA 0.53 9 17483505 17493788

Neighbor

gene id symbol gene type direction distance location
AMCG00010182 NA coding downstream 9897 17465112 ~ 17473608 (-)
AMCG00010180 NA coding downstream 31017 17440183 ~ 17452488 (-)
AMCG00010178 NA coding downstream 79998 17395137 ~ 17403507 (-)
AMCG00010179 NA coding downstream 95449 17380188 ~ 17388056 (-)
AMCG00010170 NA coding downstream 130056 17353153 ~ 17353449 (-)
AMCG00010189 NA coding upstream 328881 17822669 ~ 17825492 (-)
AMCG00010195 NA coding upstream 581144 18074932 ~ 18111982 (-)
AMCG00010196 NA coding upstream 621726 18115514 ~ 18126029 (-)
AMCG00010205 NA coding upstream 1330617 18824405 ~ 18850929 (-)
AMCG00010209 LOC103366656,LOC100696291,LOC101467343,LOC102289343 coding upstream 1389622 18883410 ~ 18903519 (-)
G78511 NA non-coding downstream 18942 17464226 ~ 17464563 (-)
G78510 NA non-coding downstream 19487 17463477 ~ 17464018 (-)
G78509 NA non-coding downstream 23001 17458889 ~ 17460504 (-)
G78508 NA non-coding downstream 25032 17457944 ~ 17458473 (-)
G78470 NA non-coding downstream 75306 17407991 ~ 17408199 (-)
G78600 NA non-coding upstream 323772 17817560 ~ 17821172 (-)
G78609 NA non-coding upstream 442334 17936122 ~ 17936577 (-)
G78614 NA non-coding upstream 475381 17969169 ~ 17969368 (-)
G78615 NA non-coding upstream 475852 17969640 ~ 17969841 (-)
G78616 NA non-coding upstream 479715 17973503 ~ 17976065 (-)
AMCG00010183 stoml2 other downstream 4714 17473829 ~ 17478791 (-)
AMCG00010169 cnot6l,LOC107752360 other downstream 187990 17282646 ~ 17295515 (-)
AMCG00010142 LOC104932682,LOC108255669 other downstream 1259464 16209319 ~ 16224041 (-)
AMCG00010082 NA other downstream 4013250 13347541 ~ 13470255 (-)
G77544 NA other downstream 5754340 11728503 ~ 11729165 (-)
AMCG00010188 NA other upstream 346919 17840707 ~ 17844389 (-)
AMCG00010190 NA other upstream 359079 17852867 ~ 17855821 (-)
G78610 NA other upstream 451447 17945235 ~ 17945761 (-)
AMCG00010206 NA other upstream 1369480 18863268 ~ 18872082 (-)
AMCG00010234 hint2,LOC106585387,LOC107720264,LOC103469931 other upstream 2694870 20188658 ~ 20195384 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G280680 NA unknown CI01000071 null 1375724 ~ 1375792 (+)
eurasian perch (Perca fluviatilis) G234333 NA non-coding NC_053135.1 CM020932.1 12487905 ~ 12489008 (-)