XLOC_006060 (eif4ebp2)


Basic Information

Item Value
gene id XLOC_006060
gene name eif4ebp2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30163515 ~ 30168897 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011961
CCTCCGAGCGCTCTTCGCTTCCTGCCTGGCGGAGGGAGGGGTCGGTGCTGACGGCTGGGAGGACGAGCTGAACGTGAAGAAAGCCCTGGGAAAGCGATAAGAAACGAGGGGAAAGGGCCCGAGGTTTTTACCTTCCATCGGGGAAAACTTATCGCTCGACTCTGATTAGCACCCGAAGCAAGTGCAATGTCGTCCAGTCGTCAGCTTAGTGAGAGCAGGGCCATCCCGACCAGGACGGTGCTGATCAACGACTCAACGCAGCTACCTCACGACTATTGCACCACTCCTGGAGGCACTTTATTCTCCACCACCCCGGGAGGAACCCGAATAATCTATGATCGTAAGTTCCTGTTGGACCGGCGTAACTCCCCCATCGCCCAGACCCCACCAGCGCACCTGCCGGTTATCCCAGGAGTGACGGGCAAGAACATCCTGAATGAAATCAAGCGGAATGAAGCGAACAACATCAACAACCATGATGCCAAGCCAGGGCAAGGTGAAGATGCTCAGTTTGAGATGGACATCTAAAGAAGAGGAACCTACGTGAACAACGATTAATTACCTGGTACCTGTGTGCCAGTGGCTTGGCTTGTAGATACCAATGTTGTGAGCCCTCTCCTTTAGCTCTCTCTAGCTGCTGGGTGCTGTTTAATCATGGGGATAAATGACTAAAGTTTGCCCAGTGGTGTTGCTGGAGCCCTGAAAGTTAACCTGTGAGCCCTGTTGAGctcttcttttttgttgtttaggTTTCAGGGCTGCCATCAGCAGTACTTGCTTGAGTCACAGAGCAAGGGAAAAATTCTCTATTGCAAGTGCCCGGATATATTACCAATTTACCATAATAGACTCATAAACGGATCAGCCATTAGAGATTCACTGCTGATAGATCAAAGTACACTGTTCCAGTTGATGCCCTTAATGCAGTCTATTTCGTTCACACATAAACTGATTTGCAGGACATGCGGTTATCATTATCTCCCTATATTTTCGATTGTTTTTCCCCCAGTTAATTTTAAAAGGGACAACAggattatattcatattttttgatTCAAAAAGTGAAAAAATTCCAATCATTCCTGctcttttatatcatttttttttcacctcAATACATTTTTCAGGTGTTCAAAAGaatagttttatattattgtCCAAAAATGCATAATTAAACCATTGACCTTAATCATTCATTTGAACTGACACATGATTTCAATGCCAAATGTGCACAGAATTTCTCATTTTATTTAGGACTACCCCAAAATAAGCATTTCAGGTCATATTAGTTTAATTTCCCAGTTTTTTCACTGttaattttaagaaaagaaacACCTAATCACATTCGTGAAAGACCAAACTGTTACTTTAGATTAAAGAGAATGTTTCTGTTCAGATTTATTTTGCTAACAGTAaggtttgtttctttgtttgtcttTGAGAGATGAAGCGTCAACATAGCCTAGTTAAAAGTTAATAACACCAAGTAATGTTTGATTGGATAAAGGGTTTAATATACCTTATAAGATGTTGACAAAGAAAGCTGGTCTCAGGAAGCACTTGCTTTATGCACCTAACAATTACGCATCTTACGGCTCCTGTTACGGGAGAAAAAGCACGGtgaatatttaacattaatatcaGCTGTGACATCTGCTGTTACTTTCCGAAATACTACAATCCTCACGAACCTTGATAATCAAATCAAAGGTAGGAAAGCACtgaagtgttgttttggtcatcgTACCATCGGTCTGTCTCATAAGCGCACACAATGTGAACGAGTTTTGTCGCGAGCAGACATTCATTTTGATTCAGATCAAACGTCTCGAAAACTTGAATTGAATCTTTCCAATGCTCTTCTATGCATGTTCTTTCGGTCTGCTTCTTAAGCTTTAGTTCACATGTCAGATCATTTTAACGTTGTTGTTTTTGGGGGGGGACGCCAAATCGTGTGGAAGACGAGAATTATTATTGTAAGAGAATTAAGCAAAGAGATTATTCAAACAAAGTGACTTAAAGAGGATAAGACTTATTCTCATGACTTTAATTGTCTTTTTCTGTGCTCCAGTCTTTGTCTGAGGCAcagaatgatttattttttcctctcacAGTGATCTCTTGTGCTTAGCCTCCGTATCCATGCCTTACTTTACTAAGCTGAGCAGCTGTGTCAAATACAGTACCCTTTCATACCTTAAAACGGGATCAGTTCCTTTCTTTCGTTTCTTTCAAGTGGAGAACAAGATCAAGATATTGCTGTTTTActagaaaacatttatatttttggaaacatgtttgttatcatttactttcttACAGAAATGGGACGATTTGGAAATGCAGAGGTGTAATATTTGTAATAGTAATGGATTGGTTAAAAGCAAATACAGAATTTAGGTTTGACTTTGAGGTCACAGTTAAGTTTCTATTCAATTTTGAGAACTTGTAAAATCCTTGGAGTATGTTTTCATGTCCGGTTTGCGCAAAAGTCACATTCAAGTTCTAATGATTTACAGTGAAGGGAAATTGGTGTATACTGTCCTTCTGTAATGGATATGAATGGTCAAATTCCAGCTTGTTTCAACTCTAAAAttatgaaatgttaaatttttttatttaaaaaaaaataatgcttactATTGCTTTATGCTTTCCCCACGCATCAAACTatcagaaatgcatttagttctgTGTGAGGGGATTTAAGATGGACGTGTTTTATCTAATATGGCAAAAAACATTGGAAACtgtattttctttcttctttgaCCCTGTTAATTTTAATGAAATGCCAATGCCAGTGGACACTATTACAGCAATTAAAGTTCCTTGATATCAA

Function

symbol description
eif4ebp2 Predicted to enable eukaryotic initiation factor 4E binding activity. Predicted to be involved in negative regulation of translational initiation. Predicted to act upstream of or within negative regulation of translation and translational initiation. Predicted to be active in cytoplasm. Is expressed in brain and head. Orthologous to human EIF4EBP2 (eukaryotic translation initiation factor 4E binding protein 2).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0006413 translational initiation biological_process
GO:0045947 negative regulation of translational initiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008190 eukaryotic initiation factor 4E binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
ko04213 Longevity regulating pathway - multiple species
ko03019 Messenger RNA biogenesis

ZFIN:

id description
ZDB-GENE-031118-83 Predicted to enable eukaryotic initiation factor 4E binding activity. Predicted to be involved in negative regulation of translational initiation. Predicted to act upstream of or within negative regulation of translation and translational initiation. Predicted to be active in cytoplasm. Is expressed in brain and head. Orthologous to human EIF4EBP2 (eukaryotic translation initiation factor 4E binding protein 2).

Ensembl:

ensembl_id ENSDARG00000031819

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011961 True 2841 mRNA 0.39 3 30163515 30168897

Neighbor

gene id symbol gene type direction distance location
XLOC_006059 spock2 coding upstream 31259 30054996 ~ 30132256 (+)
XLOC_006058 dnajb12a coding upstream 116762 30035253 ~ 30046753 (+)
XLOC_006057 cuedc2 coding upstream 227256 29925397 ~ 29936259 (+)
XLOC_006056 NA coding upstream 271695 29889189 ~ 29891820 (+)
XLOC_006055 pax2a coding upstream 357986 29770837 ~ 29805529 (+)
XLOC_006061 pald1b coding downstream 336 30169233 ~ 30214368 (+)
XLOC_006062 qrfpra coding downstream 46868 30215765 ~ 30235220 (+)
XLOC_006063 AL929330.1 coding downstream 82844 30251741 ~ 30251857 (+)
XLOC_006064 zmiz1a coding downstream 252575 30421472 ~ 30570859 (+)
XLOC_006065 AL844152.1 coding downstream 342710 30511607 ~ 30511723 (+)
XLOC_006054 CT025909.2 non-coding upstream 408088 29755293 ~ 29755427 (+)
XLOC_006053 CT025909.1 non-coding upstream 572400 29590994 ~ 29591115 (+)
XLOC_006049 NA non-coding upstream 713794 29446817 ~ 29449721 (+)
XLOC_006044 NA non-coding upstream 1080224 29083087 ~ 29083291 (+)
XLOC_006067 NA non-coding downstream 507928 30676825 ~ 30677643 (+)
XLOC_006071 CR762493.1 non-coding downstream 667759 30836656 ~ 30836776 (+)
XLOC_006074 NA non-coding downstream 751657 30920554 ~ 30928661 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_09400481_09401810 EIF4EBP2 misc CI01000012 null 9398076 ~ 9402378 (-)