G77896


Basic Information

Item Value
gene id G77896
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 14505438 ~ 14511946 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97208
acCAGTTTCGCTACTTATGCATTTTGCCTTTGAACACTTAAGCTGCCAAATCCAACTGAGCTTCAGTATCTTCTATTATCTATGTTCGTACTGAGCATTTACAAAGACCCAAAAAGTCAGTAACTTATATtgaggaaattaaattataaaaatgccaCTGTTATATCATCAACAGTTACATACGTTTTAGTGGAATAAACTGTTGGCAAAACATGGATTTACTGCCTGTAATAGAGGATCACAAGAAAGGGGTCAGATGTCGGCTTATGCTCTTGCAAATGccttaatgtaatttaatagcTATTTTATGTAATCTAaggacacacaaaaacagcactgTAGCTGAATGAACAAATCTTGATCTGGTccattcaaagcattttttgtgATTATAATATTTTCCCTTAATCATGCAGGCCATACAATTTCAATTTGGACACCACTTAATATGATGGCTTTGTTTTGGTATACTCTCCACTGCGCATCTGGCAAACTATAATTTTTATTATAGAATAAAATTTAACTGTGATAAATGATCAACTAGAATTCCCCCTATTAATATTCAAGCAATAGGTGTTGGAGTTTATCCAAGTCTCAGTCAATATCTTATCATACAGTTGCATTATTCTCTATTTGTCAAAAGATTTAGTTTTCTTCCTAGGGGCTAATACGGTCCACCTCCTCCATATTGTGGACGCGATCACCTCATTAACTGGTATTAGCCAATCTATTCAAAACAGAGATCGGACGAGCAGTTTGTTATGGCAAGGAAAAATGCATGAGAAAGCAATACTGGGGTATACAATTGATTTTAATACGTTCATGTCTTAAATGGGCTGATTTGAACAGTTTCTCGCTCGATCGCCATCACCACTGCACACGCCAATACCTTGCAATGAGTGGAGCTTATTGGGATGCCCACATTTGAGGCAATAAGTACAGTAAGCGCACTCATTACTTCAATGCAAAATCCACTGTGAAAAAATGGAACAGAGAATAAAACAATGGTGAGAGACTAGTACAGTAGGGTAGAGGACAGGTTTCCCATATACCACAACATGCAATGAGTAGGGCAGAGAGGGGTTGGTGAAACACAGGTGTGTGGAGATTGGTTTCAAGGCTCTTTTTGGCTTCCTCAGATCAGTCCACTAAGACAGCCGATGCCtgggagaaagaaaatgcaccCTCTTTTGCTTAAAGAAATTAGTTATTGGATACATACCTATGGCAGTGGAGGCAGTAATCTGTTTATCTAATGTCTATCTCACAATTTCCCTGATGCCAGATGACAAGATACTTCGCAGTAGTAGCAAACACTAAAAGGAATTCAGTTAACTCCTTTTATAAAgtaaactaaaaatactttttgtagCAATGTACCTAGTCTTCATACTGAATCTATTATCTAGCCCTTGttcaaaaagctttaaaattaataaatgtaatactaatttatgtataatataaagaATGTGATTTTTACCACATtccattttattacatattcCATATCACCAACATCTGGTGAGGAATTAGGTCAAACACACCTGTCTTTTTGGTTAACATAGAATTATACTCCGATCATTGGTTACATCCATAACATATAATATTGTTGATATGAAATTTTCAGTTCATTTGCATCAAAGGAATACAATTTAGCCTACATTTAGTCATGCAGATTGAGAGGTGGGTTTTATTCTGAGAATTTACCAGCCTGCTTTGGATTATATGTTAGTTTGTTGGGAAGCTCCCGTGGTTTTCTCATAAAGATGTGCGGTTTTATTTCATGGGGCACATTAGGTTATTGTGCGCTATTAAATAGAGTAATGCACTGCAAATTGGGATTCAAGTTGAGGGTTGTAGGGGCAGTGCTGCATCttaagcaaaaaaagaaaacttccaGTGCTAAGGTGACTTTTGCCATCAAgtgggatttgattcaagtctagTCGCTGTCCAGTAACAGGCACGTCTGTATATTTCCCAGTCAGCCACAGAGGTCTATTTCTGTGAGAGAGGCTGGAGAGCTAATCTAAGGTTGCATGCTTAAAGGCGTATCTCTACTGCGCACATTTGTGCACCAGCGTGAATTAAAGTCACCTCTAGAGTCTTTTTCTCTTGCGACGCAGAAGCATTAGAGCACTTTCATTTACCCAGGCAGTCTGCCTCATTGAAGGCAGTCTTTCAATAACAGGCCtgtaatatatactgtacacacaccgGCGAAgcacaaaacattacagttaACCTGGAAAGGATGAAGGCGAGcaattttgctttctttttaattgacgCGTCTATCTCAATAACCTTGACGTAACCAACAGAACggtgcttcagaaaaaacaGACCCATATGGCTTCTCCTTTTTAGCTCTAATTTCCTTTGTTAAAGAATAATTACACATCCACTGCCATAGGCTGCTTTCCGTCCTTATTAATCTGTTTCTATTCATTCCACTGTGCATGCTCCTTGCACAGATGTTATCCGAGGATGGTCCAGTAAACATAAAGGGCCCTATTCAGCATCGCCCTGCTTTCTCCGAGCGGTGCACTCTCTTCCCCAGACCCTGTCACTCCAGAGCAAACTGATCTGATGAACGCAGAGCGGACGAGGCCAGGCTGCAGTCACGTGGCTCAGGCATACCTTGCAGTGTGTGGTACTGATAGGAAGTCCAATATTGGAGGCGAACACAACAGTGAGCGCCGAAGCCAGTTCAATAGTGAATCCACTGCGGGGAGCACAAAGAAACAACACTTCACAGTCATTCTTCACTCTTTGGTTCTCCGGCCGCTGTCCTAAGAGCCACAGGAGCCGCATGCAATATCGAAGGCTACTTGCAAAAGAACCTGTGTCCACTCATGAATTACCTCACATGTCACGTGTGTTTGCATGCatgatgggtgtgtgtgtgggtgggtgtgtgccTGCTACACTCCTAGAGGACACTGTTAACAGCTCTTTCATGagaaacagtttaattaaattaaaacttggCTTTTCATTGGTCAGTGATGTCTAATCAATATACCTGAATTGTTTttccataattttttttttttttaatgaaaagcaaatttattttataactgtactgcattttgttttcatgtacaATAGGGCAAAATTATGATTGCTTTCTATATTAAAGTTGCAGGCCCAGTCTTTGTTGAAGACATACATAAGACAGGCAAGAACCATAATTCTGAAATTTCAACACAATGGGGAATTCTATGGAAGTTCTGTCAAAAATTATGAGGTGTCAAGCAGGgaagcagaaaataaagatCACAGATTAAAGTACATGAATACTAAATCTGACAAGCATGTAAACCAGTTAGTGGTTTATATTACAAACAACATTACTTTTACTTTCATGCAAACGTGTGTGCGGTCGATTGAAGATCTGTGCAATAAAGAATAACAAACAATTCCTTATCTGTACACCAAAACCAAGCTATTTTCTTTCAGTATATTGAATATCATGCCATTTTCACAACTGCCTGTTCTTTGTTACAGGCATGTCATCATAAAGGCAATAACTCCCCAAGTTTGGATAAATATCCCACTGATTATGCAACACCTACACagacaatacaaaaaagacaatttTAATAGTCTCAGATTAATCCAATTATTATTGTCTGGGTTAAGATGACGCTTACACGGCTTAGTTGCTCTTTGTCTATTGGCCAAAACTGGTCTGCAACACTCTGCACACTGTGCCGTTTCGAACACAGGAGTGCTGAAACACCCCAGGCTCTCACAAACCGTCACTGTTGTCATTTCGACAAAGCATTGCTGACATTAAAAGTcataatgcaacacaaaataaacagtaaacgAGGGCTGGTTTATCCAGTTCTGGATCGACAAAGTCTGATAAACAAATTGAGAAATTAGGAATTCACTTCTGAATCAATCAATTCTAATTAAAGAGTTTTCTGGTAACACCGCAATACCTCAGAAAAATTACCACAAATTGAAAAAGCTCTTCTTCTCAGTGCTGAGATCCAGAAATTTCATTATTGCGATTCTATGCAGGCAGCGTATGAGGCACACTGTGTCTCGAAGTGGCAGATTCAATTCTGCATTCTGTATGCAGAACATGATATTGTGTATGCACAGCATGAGTATCTCGCTTCTGAATCTTAAGTATGTGCAGGCTTCGGTAATTGTAGTTGTCAACAGGGGATATGAAGCTCTATACGTgactttttttaactttctaaaGACGCCAACAGACTGCGACTAAAACTATGCAACAAAGATTTAAATCATATGTCTTAATTCATTCTGAAATACGTGAATGGTATCAAAGTTCTCCAGGCTTTCGCCGAGGAACCTGAGGGTGCTATTATGAAACAGCAGTGAGCCAATGAGCTTCAGGCTCCTTAAATGATAGGGTGTAAAAACTACAGGCTATGGCATAGAACatgagattttgtatttcttttttaaattttcaaacTATTTTCAAATATTAGTCTAATGAAATTGGTTCAAGATCATCTGGACTGAATCGTGATACTCTAACACCTCATCATTTTGAGAGATTAATTGACTTAATTGGCACATTATGCAACATTAATTTGACAGGAAAGACATCCTTTTTCCCCCAACTTCCCAATTATGCTGGTTCTGTTTTATGTTAGCAGAACATTGTCCTGCGTGATATGTTGAGATTTCACAAGAACAGCTCAATCATAACATGAATGTCAGCACACTTTCATGGACAACtgaaacaatattaacattaaatggGGAGTGTAGTGTGCAAACTGTGTAGGAAAATAGAAAGTCGTTTAgcagaattaatacatttttctggcAAGTCCCTAAAAAAAAGTTCCTTAGCAATACACCGTCAGTCTGTGCTCCAATGTGAAAAGAAGTGTTATCATTCATAGCTAAGGAAAGATACAATTCTGGGTGtaaggaagagagaaaatattGGTCAGTGTTGAGAAAACATTGAGAAGATTGTCTTCAAAGGGAAGGAAAACAGTTTTTTGGCACAGGTCAAATGAAAAGCAAGCCAACAATTCCCATGCTGAATTTtcaagtttacattttaattacattttagtttaataatcTGCATAAACAGCGCATCTTTGGTCACTTTTCCAAAAGAGTGAACCCTAATCATGCAAACAAAGCCCTGCGGTTATCAATTTCCAAATATTGATCAAATATGGACGGATAAGTATTTTAACAGTTGTGCTTCACAAACTACTGCAACCACTTAGATGCAAAGTAAAACCAAGAGGCTCAAAACATATACTTCCAATAAACCCTTAGCTTACCTGGATGGTGTAATGGGCGTCAGGTCCTTGCCCATGGTCTGTATGACCCTGCGACCCCAAACCCACAAGCCTGCACAGATGCCAACACCTCCGTAGAGAAGCAACCAAATTGGGGTGGGGGCGTCCTGCATCACTCCACCCTGCTTGTAAATCATCCACAGGGCCACCAGGGGACCAATGGCATTCTGACGTCATTGCCTCCGTGGGCAAAGGAGCCAAAGCAAGCAGTGAGGACCTGCAGGAAGTGAAAGAGCAGGAAGATCTGGGGCTTGTCCTTCTCATCCTTGTCCTCCTCCACGGGGTCCTCCAGTGGGACGGGGGGTGTCTGCATGGCATCAGTGGCCAGCTTCACCTCCACACCCCCTTCCTCCGCCTCGATCTCGGCCTCGGCCACGGCGTTGCAGTAGCTGGAGTAGCTGTCGTAGCGGACGCGCTTCTTGGAGTAGGACACTGTGTCGCTCACGAGCTTCTCACTGTCCTCAGCGGCCGCGGGCTCTGAGGAGCGGAACACGGGCTGCACCGGCATCCCGCAGATGGCCGCTGTGTAGCACGTGTAGCTGTTGTTGCGTCGCAGCAGACGGTAAGAGTTGTCCGCAGGAGGGACGCTGCGGTCGTCGTCCAGGCGGCCCAGGTGGATCTTGTGAAGCAGGTCCTTGTACAGGCCCGAGTCCTTGTGCACGGTGTGGTAGACGTGTCCGTCGCTGCGCATGTGCCCGTCGAAGGTGAAGCTGCCGTTGGAGATGGGAGACTTCAGACAACCATTGGTCATGGAGTGCGTCCTGCctgcaatgcaaattaaagcacTGACCTAAGGCTGTTAAAAACGGGTCTACCTCCAACTCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97208 True 6153 lncRNA 0.41 2 14505438 14511946

Neighbor

gene id symbol gene type direction distance location
AMCG00010092 NA coding downstream 225511 14260739 ~ 14279927 (-)
AMCG00010090 LOC105901120,LOC105014579,LOC107558977 coding downstream 793067 13703397 ~ 13712371 (-)
AMCG00010091 LOC108435138,LOC105014579,LOC106585820 coding downstream 829772 13643088 ~ 13675666 (-)
AMCG00010088 NA coding downstream 870038 13578716 ~ 13635400 (-)
AMCG00010076 NA coding downstream 2036756 12465333 ~ 12468682 (-)
AMCG00010097 zbtb7c,LOC106568492,LOC106561213 coding upstream 27957 14539903 ~ 14546114 (-)
AMCG00010100 smad7,LOC106561252 coding upstream 297060 14809006 ~ 14829310 (-)
AMCG00010104 NA coding upstream 376518 14888464 ~ 14896353 (-)
AMCG00010103 dym,LOC106561256 coding upstream 414062 14926008 ~ 14927943 (-)
AMCG00010105 dym,LOC106568454 coding upstream 431608 14943554 ~ 14948207 (-)
G77887 NA non-coding downstream 59297 14441616 ~ 14446141 (-)
G77878 NA non-coding downstream 97618 14407618 ~ 14407820 (-)
G77852 NA non-coding downstream 333856 14171311 ~ 14171582 (-)
G77760 NA non-coding downstream 1783829 12718883 ~ 12721609 (-)
G77758 NA non-coding downstream 1961798 12543435 ~ 12543640 (-)
G77895 NA non-coding upstream 1982 14513928 ~ 14519622 (-)
G77975 NA non-coding upstream 447114 14959060 ~ 14961505 (-)
G77988 NA non-coding upstream 527614 15039560 ~ 15074454 (-)
G77992 NA non-coding upstream 565644 15077590 ~ 15077845 (-)
G78014 NA non-coding upstream 671166 15183112 ~ 15183394 (-)
AMCG00010082 NA other downstream 1035183 13347541 ~ 13470255 (-)
G77544 NA other downstream 2776273 11728503 ~ 11729165 (-)
AMCG00009989 NA other downstream 6184094 8314109 ~ 8321344 (-)
AMCG00009987 NA other downstream 6298111 8195735 ~ 8207327 (-)
AMCG00009962 NA other downstream 7215744 7284862 ~ 7289694 (-)
AMCG00010142 LOC104932682,LOC108255669 other upstream 1697373 16209319 ~ 16224041 (-)
AMCG00010169 cnot6l,LOC107752360 other upstream 2770700 17282646 ~ 17295515 (-)
AMCG00010183 stoml2 other upstream 2961883 17473829 ~ 17478791 (-)
AMCG00010188 NA other upstream 3328761 17840707 ~ 17844389 (-)
AMCG00010190 NA other upstream 3340921 17852867 ~ 17855821 (-)

Expression


Co-expression Network