Gene
RNA
| Item | Value |
|---|---|
| gene id | G79404 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 22079203 ~ 22079441 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU99016 | True | 239 | lncRNA | 0.44 | 1 | 22079203 | 22079441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010268 | NA | coding | downstream | 3120 | 22069126 ~ 22076083 (-) |
| AMCG00010269 | NA | coding | downstream | 14848 | 22049997 ~ 22064355 (-) |
| AMCG00010270 | NA | coding | downstream | 35724 | 22030994 ~ 22043479 (-) |
| AMCG00010267 | NA | coding | downstream | 67411 | 22007414 ~ 22011792 (-) |
| AMCG00010263 | NA | coding | downstream | 306666 | 21757180 ~ 21772537 (-) |
| AMCG00010273 | nkx6.1,nkx6-1,LOC107700773,LOC107706438,LOC107722812 | coding | upstream | 270959 | 22350400 ~ 22354352 (-) |
| AMCG00010274 | rpl17 | coding | upstream | 278541 | 22357982 ~ 22361854 (-) |
| AMCG00010275 | NA | coding | upstream | 348928 | 22428369 ~ 22432273 (-) |
| AMCG00010276 | NA | coding | upstream | 356983 | 22436424 ~ 22443529 (-) |
| AMCG00010277 | NA | coding | upstream | 372748 | 22452189 ~ 22530542 (-) |
| G79403 | NA | non-coding | downstream | 2347 | 22076546 ~ 22076856 (-) |
| G79372 | NA | non-coding | downstream | 49248 | 22029604 ~ 22029955 (-) |
| G79367 | myl5,LOC103390377 | non-coding | downstream | 58187 | 22018848 ~ 22021016 (-) |
| G79368 | NA | non-coding | downstream | 61266 | 22016717 ~ 22017937 (-) |
| G79324 | NA | non-coding | downstream | 293502 | 21785446 ~ 21785701 (-) |
| G79405 | NA | non-coding | upstream | 4806 | 22084247 ~ 22084564 (-) |
| G79406 | NA | non-coding | upstream | 12158 | 22091599 ~ 22091976 (-) |
| G79407 | NA | non-coding | upstream | 17397 | 22096838 ~ 22098788 (-) |
| G79424 | NA | non-coding | upstream | 228677 | 22308118 ~ 22308320 (-) |
| G79430 | NA | non-coding | upstream | 301293 | 22380734 ~ 22383130 (-) |
| AMCG00010271 | NA | other | downstream | 97153 | 21964529 ~ 21982050 (-) |
| AMCG00010262 | shc3 | other | downstream | 506691 | 21541019 ~ 21572512 (-) |
| AMCG00010247 | NA | other | downstream | 997378 | 21053624 ~ 21081825 (-) |
| G79147 | cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 | other | downstream | 1137810 | 20931171 ~ 20941393 (-) |
| AMCG00010234 | hint2,LOC106585387,LOC107720264,LOC103469931 | other | downstream | 1883819 | 20188658 ~ 20195384 (-) |
| AMCG00010288 | NA | other | upstream | 1003214 | 23082655 ~ 23086345 (-) |
| G79601 | NA | other | upstream | 1280202 | 23359643 ~ 23364947 (-) |
| AMCG00010343 | hook3 | other | upstream | 3436623 | 25516064 ~ 25556080 (-) |
| AMCG00010364 | inip,LOC107658659,LOC107558675,LOC107571239 | other | upstream | 4288491 | 26367932 ~ 26379747 (-) |
| AMCG00010371 | NA | other | upstream | 4332769 | 26412210 ~ 26426658 (-) |
