AMCG00010845


Basic Information

Item Value
gene id AMCG00010845
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2537198 ~ 2539438 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010845
ATGGACCAGATGGGCAAGATGAGAGGCCAGCCGTATGGAGGGACTAACCCTTACTCCCAGCAGCCTCAGCAAGGCCCACCTCCTGGGCCTCAGCAAGGGGCCTCGTACCCAGGGCAGGGCTATGGGCCCCCCACTCCGCAGCGCTACCCCATAGGCATGCAGGGTCGCACCCCGGGGGGCATGGGCAGCATGCAGTATGGGCAACAGATGCCTCCCTACGGACAGCAGGGGCCGGCTGGCTACGGACAGCAGGGCCAGGCGCCGTACTACAGCCAGCAGGCCCAGCCCCCCCACGCCGCCCAGCAGCAGTCCCCCTACCCCCAGCAACCTCAGAGCCAGCCGGGCGCGCAGACCCCCTACTCACAGCAGCACCCGGCGCAACCCTCGGCCCAGCACGCCCAGGCACAGCCCCCCTATGCGCAGCCGCACCAGACGCCCCAGGCCCAGGCGCAGCAGCAGGCGCAGCCCGTGCCCACCCAGGCCCAGCCCCCGTACTCCCAGTCCCAGCCACCCCAGTCTGCCCAGGCGCCCTACCCCCAGCAGCAggtccccccaccccaacagcagcagcagcagcagcagcagcagcaacaacaacaacaacaacaacagcagcagacCTCGCAGGTCCAACAGGCTCAACAGCCTCAGCCAAGTTACCCCCAGCCCCAGCCTGCCCCCCAACAGCAGCCTCCCCCCCAGCCTCCGCAGCCTCCGCAGACGTCCACGCCCCAGCAGCAATCCCAGCAACCCCCCGGACACGCCCCGCCCCAGCAGAGTCAGACCACCCCCTACGCCCAGGTTCCTCCTCCACAGCAGCAACCACCGCCGCcgccgcagcagcagcaggcgtCTCCCTACCAGCGCTTCCCCCCGCCACCCCAGGTACGGCCGGCCTCGTGCGGGTGTCCGCTATGCCCGAGGGCAGTACAGGACGGCTGCACTGCGGGTGTTGCGTAG

Function

GO: NA

KEGG:

id description
ko00310 Lysine degradation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010845 True 960 mRNA 0.70 2 2537198 2539438

Neighbor

gene id symbol gene type direction distance location
AMCG00010844 arid1a,LOC106588635 coding downstream 17407 2506720 ~ 2519791 (-)
AMCG00010842 NA coding downstream 34698 2499805 ~ 2502500 (-)
AMCG00010841 fam46ba,LOC107597110,LOC108443429,LOC107587747,LOC107734389,LOC107704962,LOC107700733 coding downstream 87644 2442227 ~ 2449554 (-)
AMCG00010839 NA coding downstream 154953 2365473 ~ 2382245 (-)
AMCG00010840 NA coding downstream 200455 2332216 ~ 2336743 (-)
AMCG00010852 gpn2 coding upstream 80523 2619961 ~ 2623328 (-)
AMCG00010850 NA coding upstream 85565 2625003 ~ 2628517 (-)
AMCG00010849 nudc,LOC107737783,LOC107580217,LOC104951062 coding upstream 91036 2630474 ~ 2638055 (-)
AMCG00010848 NA coding upstream 109823 2649261 ~ 2661858 (-)
AMCG00010851 NA coding upstream 147628 2687066 ~ 2689410 (-)
G102651 NA non-coding downstream 99500 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 174088 2362880 ~ 2363110 (-)
G102629 NA non-coding downstream 219934 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 284731 2252119 ~ 2252467 (-)
G102615 NA non-coding downstream 359682 2177276 ~ 2177516 (-)
G102725 NA non-coding upstream 135125 2674563 ~ 2675136 (-)
G102785 NA non-coding upstream 250032 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 415322 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 451209 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 605826 3145264 ~ 3145687 (-)
AMCG00010843 NA other downstream 40752 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1502324 1033830 ~ 1034874 (-)
G102434 NA other downstream 1559071 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2387369 136369 ~ 149829 (-)
G102762 NA other upstream 200378 2739816 ~ 2778023 (-)
G102774 NA other upstream 219040 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 640532 3179970 ~ 3182619 (-)
G102990 NA other upstream 781375 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 781938 3321376 ~ 3327559 (-)

Expression


Co-expression Network