AMCG00015371


Basic Information

Item Value
gene id AMCG00015371
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8526032 ~ 8528682 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015371
GGAACCCGGCCGCCGGGCGCGCTTTGGGGGGGAAGGTTTTTACCATCGTGCCGGAAGTAGAGGCGATTGTTGACACATGCGTTTTGTGCCTGTGCTGTAGTGAGGGAGCTGATGGGAGACCGGACTTTCTGTTTTACTGGCAGACTACACACAACTTTCTTCCCCGACAAGGAAAGGAGGGATCTGACAAGCTATCGACAGACATTTCcgcttttgtttctttcaagCTGGGTCCAACCGACGCTACGGAGTTTCTGGCAGAATTTCGAACCCGCGACGCAAAAGAAATAGTGACGTAGTTGCCTTCGCGATGTCACAGGCTACCAAGCGGAAACACGTGGTGAAGGAGGTCCTGGGCGATTACGTCACCCCCACGGAGCAGCAGCAGATTGTGAGGGTGCTGGGCTCTCCGGGGAACAACCTGCACGAGGCTGAGACAGCGCTGGGCCAACGCTTCCTTGTCAGCATGCCCACCAAGTTTCGCAAGAACATCTGGATCAAGAGAGGTGACTTTGTGATCGTGGACCCCATCGAGGAGGGGGAGAAGGTGAAGGGGGAGATCAGTGCCATTCTCTACAAGGATCACATACAACACCTCAAGACTCAGGGCGTGTGgcCTCAGGAATTCTCAGTGGACTCTGCTGCAGGAGAGAAAATGAATCAGGAGAAGATTAGCAGCGGTGGGTTAGGGGGGGgcggggaagaggaggagggtgaTGAAGAAGGGACGAGTGAGGAAGACGACAGCGATTTGTTCGTCAACACAAACCGTGCTAACTACCACTACAGTGAAAGCGAGGGAGAGACTGActctgaagaggaggaggaagagaacaGTGTGGATGGAAAGGACTGAGCCACCTCTCTTTTGTCATCCCTCCATCTCACTGCCCTCTGTTTGTACAGTTCTCCTGTGAATTTAACCTCCCAATTAAGCAACAGCTTCAGTTAATCAATTAACAtttcagctggaacaaaaatgAGGGATTAATATTTATCATTGGTTCAGCAGACAGGGGGTATTAACCTGAACTgtactctcactctctctccaggaccagggctgcaaTATGATGgatcaataaatgcattttctttttgatatttttctaaATCACCATAATTCTCCATGAGGAAGAATggtgtaaacacacacattcatgtaGAGATGTGCGTATAATGATTGTGGGTGTATATAGgttactttttatttcctcCGTATCCTTGTCTGTAACAGACAGCAacggtatttaaaaaaaatataataaaggaaACTGATCAA

Function

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG:

id description
K15025 EIF1AD; probable RNA-binding protein EIF1AD

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015371 True 1282 mRNA 0.49 6 8526032 8528682

Neighbor

gene id symbol gene type direction distance location
AMCG00015373 NA coding downstream 31172 8486551 ~ 8494860 (-)
AMCG00015367 calm1,LOC102293206,LOC102778633,LOC107396020 coding downstream 44670 8479116 ~ 8481362 (-)
AMCG00015366 NA coding downstream 108256 8413410 ~ 8417776 (-)
AMCG00015360 NA coding downstream 173046 8351682 ~ 8352986 (-)
AMCG00015350 NA coding downstream 250165 8265796 ~ 8275867 (-)
AMCG00015375 NA coding upstream 5697 8534379 ~ 8535400 (-)
AMCG00015380 NA coding upstream 72645 8601327 ~ 8608308 (-)
AMCG00015379 ppp1r14b,LOC108268202 coding upstream 84574 8613256 ~ 8623716 (-)
AMCG00015387 LOC108267603,LOC106603153,LOC107583282,LOC107721660 coding upstream 139522 8668204 ~ 8671343 (-)
AMCG00015385 LOC108428058,LOC107568312,LOC107715375,LOC107669368 coding upstream 157085 8685767 ~ 8687647 (-)
G97475 NA non-coding downstream 92716 8431923 ~ 8433316 (-)
G97409 gng3,LOC107559409 non-coding downstream 399568 8124268 ~ 8126464 (-)
G97395 NA non-coding downstream 456995 8068780 ~ 8069037 (-)
G97244 NA non-coding downstream 509959 8001486 ~ 8016073 (-)
G97221 NA non-coding downstream 555275 7969597 ~ 7970757 (-)
G97536 NA non-coding upstream 68053 8596735 ~ 8598299 (-)
G97561 NA non-coding upstream 82265 8610947 ~ 8611396 (-)
G97562 NA non-coding upstream 83813 8612495 ~ 8634660 (-)
G97574 NA non-coding upstream 126491 8655173 ~ 8656821 (-)
G97575 NA non-coding upstream 135393 8664075 ~ 8668051 (-)
G97455 mark2a,LOC107715377 other downstream 114150 8409987 ~ 8411882 (-)
AMCG00015361 NA other downstream 156001 8361614 ~ 8370031 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other downstream 242403 8223199 ~ 8283629 (-)
G97411 NA other downstream 391917 8131307 ~ 8134115 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other downstream 434206 8070035 ~ 8091826 (-)
AMCG00015374 NA other upstream 12506 8541188 ~ 8545795 (-)
AMCG00015372 lrfn4,LOC101077706,LOC106517947,LOC102210474,LOC101487083,LOC102311587 other upstream 50818 8579500 ~ 8582686 (-)
AMCG00015393 zgc:77262,LOC107715378,LOC107669316,LOC107568302,LOC108428054,LOC107567914,LOC108278748,LOC107700012 other upstream 260978 8789660 ~ 8794774 (-)
AMCG00015394 NA other upstream 300620 8829302 ~ 8838979 (-)
AMCG00015400 NA other upstream 425831 8954513 ~ 8960144 (-)

Expression


Co-expression Network