Gene
RNA
| Item | Value |
|---|---|
| gene id | G100381 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 19993240 ~ 19995630 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: melatonin receptor type 1A-A-like |
| id | name | namespace |
|---|---|---|
| GO:0006030 | chitin metabolic process | biological_process |
| GO:0006032 | chitin catabolic process | biological_process |
| GO:0046348 | amino sugar catabolic process | biological_process |
| GO:1901072 | glucosamine-containing compound catabolic process | biological_process |
| GO:0006026 | aminoglycan catabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125404 | True | 1078 | lncRNA | 0.37 | 2 | 19993240 | 19995630 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015753 | LOC108275807,LOC108441536 | coding | downstream | 47940 | 19932285 ~ 19945300 (-) |
| AMCG00015750 | NA | coding | downstream | 64713 | 19927382 ~ 19928527 (-) |
| AMCG00015749 | NA | coding | downstream | 83090 | 19907639 ~ 19910150 (-) |
| AMCG00015743 | znf330,zn330,LOC107746098 | coding | downstream | 233085 | 19747264 ~ 19760155 (-) |
| AMCG00015740 | NA | coding | downstream | 734118 | 19239310 ~ 19259122 (-) |
| AMCG00015751 | NA | coding | upstream | 539 | 19996169 ~ 20010622 (-) |
| AMCG00015755 | NA | coding | upstream | 119663 | 20115293 ~ 20122414 (-) |
| AMCG00015763 | NA | coding | upstream | 317500 | 20313130 ~ 20340896 (-) |
| AMCG00015762 | NA | coding | upstream | 346113 | 20341743 ~ 20363462 (-) |
| AMCG00015760 | NA | coding | upstream | 451470 | 20447100 ~ 20469761 (-) |
| G100297 | NA | non-coding | downstream | 67138 | 19925802 ~ 19926102 (-) |
| G100267 | NA | non-coding | downstream | 148496 | 19839374 ~ 19844744 (-) |
| G100261 | rnf150,LOC107703843,LOC107746087 | non-coding | downstream | 191015 | 19801976 ~ 19802225 (-) |
| G100257 | LOC104962440 | non-coding | downstream | 253039 | 19721668 ~ 19740201 (-) |
| G100233 | NA | non-coding | downstream | 280024 | 19712927 ~ 19713216 (-) |
| G100385 | NA | non-coding | upstream | 100251 | 20095881 ~ 20100083 (-) |
| G100391 | LOC100846954 | non-coding | upstream | 157556 | 20153186 ~ 20153634 (-) |
| G100416 | NA | non-coding | upstream | 311421 | 20307051 ~ 20309103 (-) |
| G100468 | NA | non-coding | upstream | 780990 | 20776620 ~ 20776836 (-) |
| G100535 | NA | non-coding | upstream | 1308404 | 21304034 ~ 21310751 (-) |
| AMCG00015752 | NA | other | downstream | 11683 | 19974956 ~ 19981557 (-) |
| AMCG00015723 | lsm6,LOC106610200 | other | downstream | 1362575 | 18627605 ~ 18630665 (-) |
| G99939 | NA | other | downstream | 2155298 | 17837580 ~ 17837942 (-) |
| AMCG00015694 | NA | other | downstream | 3381796 | 16592228 ~ 16611444 (-) |
| AMCG00015691 | NA | other | downstream | 3457772 | 16524114 ~ 16535468 (-) |
| AMCG00015761 | herc3 | other | upstream | 231737 | 20227367 ~ 20279644 (-) |
| AMCG00015800 | NA | other | upstream | 2685064 | 22680694 ~ 22702249 (-) |
| AMCG00015825 | LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 | other | upstream | 3748160 | 23743790 ~ 23746703 (-) |
| G101067 | NA | other | upstream | 4997323 | 24992953 ~ 25000890 (-) |
| AMCG00015892 | spcs3,LOC106602378 | other | upstream | 7991125 | 27986755 ~ 27997677 (-) |
