G100385


Basic Information

Item Value
gene id G100385
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 20095881 ~ 20100083 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125408
agagagaggccgaCACACACCCAGACACGCACAGACACACCTCAGAGACTGCGCTCAGTCCAGCTGCTGTCCTTCCCCCTCCCTGACTGCTACACAGCGCTGGAGACAAGCTGTTCTCATCAGCATCACCTGCACTCTCTACAGAGatttcccacaatgcaacacCTGCATTTACAGCTTGGAAAGTCGCCTGCTATTTCGATTTGACaatttttctgtttcttgtgtataatttcttataataataataataataataataataataataataataataataataataataaagctaatAATGATGTATAACTGCTGAGCTGTTTTCAGTCTACAGGAGTCTGTGCAGTGAGTTTCCTGCAGGCTGcctttaacccccccccccctctcagATTACAAACGTCTTGTTTGATACTAAAAAATACAGCTGAACTCCATCAAACTACCAGTGTGagcaaaattaatgttttaatagtcAAGGAAAATACGTCTTTACAAGAATAACTAGagggaaataataattattataataataagacagGAAATAATTTGTTACAAATTGTAAGCAgcgatgaataaataaatatcacttcCCAGGATGTagaacttgtattttgtatttactgtatgttttcctgtacatttgtgttattttgaagttgtaattttattatgtttagatttgtattattgttattttataatgctcttatataTCGGTGCTGGATAACGCCATGGATAACAGTGTCTGCAAagacaggggttcccaaactttttctATCCAAGGACCCCTTTCCTAACCAGATTCTGACTGAGGACCCCACCTATAAAAAATGCCACAGCTGCCTCATTATACTAcgttaataaaaggaaaaatggaGAACATAGAACCTTATTCTTAGCTGACAAGTTCGGATTCAAACTCACTTGTAATGAAATGGATGGGCCTGTATGTTATTTCATTATTGAtcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125408 True 973 lncRNA 0.36 2 20095881 20100083

Neighbor

gene id symbol gene type direction distance location
AMCG00015751 NA coding downstream 85259 19996169 ~ 20010622 (-)
AMCG00015753 LOC108275807,LOC108441536 coding downstream 150581 19932285 ~ 19945300 (-)
AMCG00015750 NA coding downstream 167354 19927382 ~ 19928527 (-)
AMCG00015749 NA coding downstream 185731 19907639 ~ 19910150 (-)
AMCG00015743 znf330,zn330,LOC107746098 coding downstream 335726 19747264 ~ 19760155 (-)
AMCG00015755 NA coding upstream 15210 20115293 ~ 20122414 (-)
AMCG00015763 NA coding upstream 213047 20313130 ~ 20340896 (-)
AMCG00015762 NA coding upstream 241660 20341743 ~ 20363462 (-)
AMCG00015760 NA coding upstream 347017 20447100 ~ 20469761 (-)
AMCG00015764 NA coding upstream 383487 20483570 ~ 20484280 (-)
G100381 NA non-coding downstream 100251 19993240 ~ 19995630 (-)
G100297 NA non-coding downstream 169779 19925802 ~ 19926102 (-)
G100267 NA non-coding downstream 251137 19839374 ~ 19844744 (-)
G100261 rnf150,LOC107703843,LOC107746087 non-coding downstream 293656 19801976 ~ 19802225 (-)
G100257 LOC104962440 non-coding downstream 355680 19721668 ~ 19740201 (-)
G100391 LOC100846954 non-coding upstream 53103 20153186 ~ 20153634 (-)
G100416 NA non-coding upstream 206968 20307051 ~ 20309103 (-)
G100468 NA non-coding upstream 676537 20776620 ~ 20776836 (-)
G100535 NA non-coding upstream 1203951 21304034 ~ 21310751 (-)
G100554 NA non-coding upstream 1318592 21418675 ~ 21502989 (-)
AMCG00015752 NA other downstream 114324 19974956 ~ 19981557 (-)
AMCG00015723 lsm6,LOC106610200 other downstream 1465216 18627605 ~ 18630665 (-)
G99939 NA other downstream 2257939 17837580 ~ 17837942 (-)
AMCG00015694 NA other downstream 3484437 16592228 ~ 16611444 (-)
AMCG00015691 NA other downstream 3560413 16524114 ~ 16535468 (-)
AMCG00015761 herc3 other upstream 127284 20227367 ~ 20279644 (-)
AMCG00015800 NA other upstream 2580611 22680694 ~ 22702249 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other upstream 3643707 23743790 ~ 23746703 (-)
G101067 NA other upstream 4892870 24992953 ~ 25000890 (-)
AMCG00015892 spcs3,LOC106602378 other upstream 7886672 27986755 ~ 27997677 (-)

Expression


Co-expression Network