AMCG00018362


Basic Information

Item Value
gene id AMCG00018362
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9190764 ~ 9192941 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018362
ATGGTGAGCTCCAGTGACCTACAGGAGGTGGAGGCCATAGATGCCGAGCTGAAACGCCTGGGgctgaagcagcagcagctgagTGACCGGCAGGCCCTGCTGGCTATGCTGCAGGGCTTCAAGGAGACCTCCTACTACAGAAACCCcaccaaaaagaagaaaaaagGGGAGGACACAGGCATGAGGACGGAGCTGCAGAAGATCGAGGAGCAGCTGGAGACCCTCGCCGATCAGGAGGAAGACCTCATGGCCCGCAAAGACGAGATCCTCTTTCCAAACGGACACCACACAGATGTCCCCAGACTGAAAGACATGGGGGTATTTGTCCTCCCTCGTCTTACTGAAGACGTCCTGAACAtagcccccccaccctccactcCAGCTCCTCAGGTTATCCTGGACGTGGAGAATCTGCCCCCCATTCCGTCGCACACTCAGTGCCCTTCCTGCTACCAGTTTGTCATCACAGAAACCTTCACCAAGGTGGGCAACATCGCCTGGCTGACGTGCTTCTTGAGCGTGTTCTTTGGcTGTGTGGCAGGGTGCTGCTTGATCCCGTTCTGCATCGAGTCTTTTAAAGACGTCATTCACAGGTGCCCCAAGTGTCGTACCCATATCCACACTGTCACCAACCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018362 True 639 mRNA 0.56 5 9190764 9192941

Neighbor

gene id symbol gene type direction distance location
AMCG00018352 NA coding downstream 274737 8909747 ~ 8916027 (-)
AMCG00018353 NA coding downstream 285353 8824642 ~ 8905411 (-)
AMCG00018346 LOC104930119,LOC101486217,LOC102210124,LOC108246886,LOC106529451,LOC100701961 coding downstream 473362 8700411 ~ 8717402 (-)
AMCG00018347 NA coding downstream 491831 8693359 ~ 8698933 (-)
AMCG00018340 LOC108274424 coding downstream 502534 8687709 ~ 8688230 (-)
AMCG00018363 snrnp25,cp033,LOC106601091,LOC101481050,LOC107703331 coding upstream 1097 9194038 ~ 9199468 (-)
AMCG00018361 cdip1,LOC100712532,LOC103374307 coding upstream 14596 9207537 ~ 9217538 (-)
AMCG00018367 NA coding upstream 167359 9360300 ~ 9380160 (-)
AMCG00018370 nprl3,LOC106601082,LOC106607369 coding upstream 254543 9447484 ~ 9470583 (-)
AMCG00018378 NA coding upstream 295989 9488930 ~ 9490012 (-)
G115874 NA non-coding downstream 328387 8861873 ~ 8862377 (-)
G115807 NA non-coding downstream 671561 8517334 ~ 8519203 (-)
G115732 NA non-coding downstream 757194 8430126 ~ 8433570 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 1322138 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 1348056 7842337 ~ 7842708 (-)
G115949 NA non-coding upstream 7859 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 287969 9480910 ~ 9482152 (-)
G116065 NA non-coding upstream 334551 9527492 ~ 9527736 (-)
G116136 NA non-coding upstream 591489 9784430 ~ 9788579 (-)
G116236 NA non-coding upstream 950484 10143425 ~ 10144599 (-)
AMCG00018339 NA other downstream 513956 8666737 ~ 8676808 (-)
AMCG00018344 NA other downstream 541957 8641896 ~ 8648807 (-)
G115581 NA other downstream 1416872 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 2537991 6610633 ~ 6652773 (-)
G115320 NA other downstream 3239709 5950421 ~ 5951055 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 46871 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 581365 9774306 ~ 9779545 (-)
G116165 NA other upstream 726105 9919046 ~ 9924582 (-)
AMCG00018416 usp42 other upstream 927658 10120599 ~ 10136769 (-)
AMCG00018424 tecpr1,LOC102784946,LOC103372311 other upstream 1110113 10303054 ~ 10332982 (-)

Expression


Co-expression Network