AMCG00021571


Basic Information

Item Value
gene id AMCG00021571
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 21832823 ~ 21834923 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021571
ATGAGCTGCAGAGAAGTTTCCACAGGATCTCTGCTCTGTGAACAGGTCACCAGCCGTGAGGGGAACATGGGTCTGTGGCACAGCTGTGCGGCTCTGGCGAGGATGCTGCTCTTCTTGGCGTccctgtgcatgtgtgtgtctgtgtgcgatGGCCGGTCAGAGGTGTCCAGAGGGGTCGTCATTCCCTTCGTATTTGATGCAAAAGCTACTTGTGACCCACCGTGTCGTCATGCAGGGCTCTGCATCAGGAACAATACCTGCTTCTGCTCCAAGGGCTACGAAGGGGAGCTCTGCCAGTATGCGATCTGTCCTCAGGGATGTAGGAACGGCGGGAGCTGTGTGGCCCCTGGCATCTGCAGCTGTCCCGAGGGCTGGCTCGGGGGGGCGTGCCATATTGCTGTGTGCACCCAGCCTTGTCTCCATGGAGGGAAATGTGTCGCGCCCCACACGTGCCGGTGCCGTGGCCCTTACTCTGGGCCCCAGTGCAGAGAGAAGAAGAAGCAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021571 True 507 mRNA 0.59 3 21832823 21834923

Neighbor

gene id symbol gene type direction distance location
AMCG00021570 tmem106b,LOC107584266,LOC107724356,LOC107709260,LOC107696205,LOC107702131,LOC108425340,LOC103043314 coding upstream 4603 21814970 ~ 21828220 (+)
AMCG00021567 NA coding upstream 172950 21657542 ~ 21659873 (+)
AMCG00021566 phf14,LOC107722156,LOC107698992 coding upstream 227760 21574050 ~ 21605063 (+)
AMCG00021565 LOC108410782,LOC107670023,LOC107698976,LOC107722163,LOC107555956 coding upstream 471221 21360168 ~ 21361602 (+)
AMCG00021563 NA coding upstream 541731 21269203 ~ 21291092 (+)
AMCG00021573 NA coding downstream 35730 21870653 ~ 21872068 (+)
AMCG00021574 NA coding downstream 43233 21878156 ~ 21897029 (+)
AMCG00021575 arl4a,LOC103358889,LOC104928894 coding downstream 64973 21899896 ~ 21902053 (+)
AMCG00021585 NA coding downstream 401055 22235978 ~ 22237376 (+)
AMCG00021584 bzw2,LOC107702135 coding downstream 413328 22248251 ~ 22265190 (+)
G86905 NA non-coding upstream 194307 21638276 ~ 21638516 (+)
G86892 NA non-coding upstream 316580 21516033 ~ 21516243 (+)
G86884 NA non-coding upstream 535043 21295531 ~ 21297780 (+)
G86859 NA non-coding upstream 594660 21237101 ~ 21238163 (+)
G86833 LOC107754811,LOC107672863,LOC107731557 non-coding upstream 657164 21172090 ~ 21175659 (+)
G87030 agr2 non-coding downstream 468643 22303566 ~ 22306888 (+)
G87086 twist1 non-coding downstream 752291 22587214 ~ 22588925 (+)
G87091 NA non-coding downstream 793697 22628620 ~ 22628886 (+)
G87168 NA non-coding downstream 1172471 23007394 ~ 23014831 (+)
G87215 NA non-coding downstream 1310081 23145004 ~ 23191753 (+)
AMCG00021560 NA other upstream 575634 21241666 ~ 21257189 (+)
G86861 mios,LOC106605261,LOC106582151 other upstream 596743 21235070 ~ 21236080 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other upstream 599970 21229852 ~ 21232853 (+)
AMCG00021551 NA other upstream 667323 21158624 ~ 21165500 (+)
AMCG00021550 NA other upstream 723455 21098419 ~ 21109368 (+)
AMCG00021591 NA other downstream 435948 22270871 ~ 22291141 (+)
AMCG00021602 NA other downstream 862241 22697164 ~ 22711144 (+)
AMCG00021656 NA other downstream 2339480 24174403 ~ 24178092 (+)
AMCG00021657 NA other downstream 2348285 24183208 ~ 24198827 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other downstream 3074961 24909884 ~ 24949100 (+)

Expression


Co-expression Network