G89006


Basic Information

Item Value
gene id G89006
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 34387254 ~ 34387672 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111044
AGGAATTGAAGAAATACCACATCACCCAGGCAATGATGGTGTTATAATACAGACCCACCAGGAAAGAGACACACATGGATGCTATACCACTCCCAAAAGATAAGGGTGAATGGTGCTCCACACACCAACACTGCCTTTCCTTAGTCTTTGGCCAATTGCAAACTCCAGGTGCAGCAATGGGATTCCTTCGAGGACTAGCAGGATTAGGAATGGAATCATGAACGCCCCTGGA

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system

RNA

RNA id representative length rna type GC content exon number start site end site
TU111044 True 232 lncRNA 0.47 2 34387254 34387672

Neighbor

gene id symbol gene type direction distance location
AMCG00021862 NA coding upstream 63332 34304949 ~ 34323922 (+)
AMCG00021859 clptm1l coding upstream 100935 34274666 ~ 34286319 (+)
AMCG00021858 NA coding upstream 565168 33810474 ~ 33822086 (+)
AMCG00021855 csmd3,LOC106570400 coding upstream 800754 33548596 ~ 33586500 (+)
AMCG00021856 csmd3 coding upstream 849344 33475168 ~ 33537910 (+)
AMCG00021869 NA coding downstream 19177 34406849 ~ 34413209 (+)
AMCG00021876 fhod3,LOC108413044,LOC102209662,LOC102799816 coding downstream 209244 34596916 ~ 34607621 (+)
AMCG00021873 fhod3 coding downstream 237376 34625048 ~ 34678756 (+)
AMCG00021875 NA coding downstream 297343 34685015 ~ 34690667 (+)
AMCG00021874 rprd1a coding downstream 312176 34699848 ~ 34716167 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 1052 34383959 ~ 34386202 (+)
G88980 NA non-coding upstream 13589 34369970 ~ 34373665 (+)
G88938 NA non-coding upstream 209776 34176954 ~ 34177478 (+)
G88937 NA non-coding upstream 210548 34176389 ~ 34176706 (+)
G88927 NA non-coding upstream 231288 34155421 ~ 34155966 (+)
G89010 NA non-coding downstream 32119 34419791 ~ 34420057 (+)
G89222 NA non-coding downstream 1019038 35406710 ~ 35406984 (+)
G89280 NA non-coding downstream 1473244 35860916 ~ 36195602 (+)
G89283 NA non-coding downstream 1504491 35892163 ~ 35893862 (+)
G89285 NA non-coding downstream 1512971 35900643 ~ 35901176 (+)
AMCG00021802 kdm1b other upstream 3918334 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 3979482 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 5001929 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 5111907 29264827 ~ 29275347 (+)
G88276 NA other upstream 5321915 29060887 ~ 29065339 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other downstream 538881 34926553 ~ 35077090 (+)
G89142 NA other downstream 823461 35211133 ~ 35263537 (+)
G89299 NA other downstream 1576899 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 2262560 36650232 ~ 36659244 (+)
G89578 NA other downstream 3733585 38121257 ~ 38151049 (+)

Expression


Co-expression Network