G89283


Basic Information

Item Value
gene id G89283
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35892163 ~ 35893862 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111391
cactcaagaaccaatcacctatgatCTATCAGGCATTAAAAGGCAACGCACAGcgactttctctctctctcacctgaaccagtaactcactgccacagctcaacctgtagctctgtcaCCAGAAACagaaccggaaaccaactaagtctttgccggcaacagaagagttgaACTGGgggaaggagattgagccgtacaaagaattctttaaagaactttattaagtaaagaactttagaacctgcgcctgcccgcctgtgcccacctgatcagtggagttcatacagctggacaattgactaagtcaactgtaatacagaagtattcagtcatttaaatagctattgagtcttaagaaacttgacccttggaaatgaACAGGGCCGTTTCCTcaaagtaactacggtggaaaacactgcttacaaagaagacatcctgtgcacaacattggagccttcaaaccagtggaaaatctgtttggaaaagactctacttttgCGAAAcccccaacttccaggagcatcgactgaagtggaagttattggacaaagccgaactggactgcctttgttccaaaccgtgtgtttttatttgagcccgaagacagagaggcctctatGCGACGAaAGTGGTGGAGAATGTGTGCAACTTTCTTGAGAAATACCCACCGAGCAAGCATGGAGAGTCTCATTCAGCAACTGGTTCAGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111391 True 710 lncRNA 0.45 2 35892163 35893862

Neighbor

gene id symbol gene type direction distance location
AMCG00021894 NA coding upstream 4910 35864749 ~ 35887253 (+)
AMCG00021886 NA coding upstream 298825 35579959 ~ 35593338 (+)
AMCG00021884 NA coding upstream 674032 35200245 ~ 35218131 (+)
AMCG00021880 NA coding upstream 716395 35108615 ~ 35175768 (+)
AMCG00021882 NA coding upstream 805659 35077101 ~ 35086504 (+)
AMCG00021893 NA coding downstream 90193 35984055 ~ 36013655 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding downstream 571924 36465786 ~ 36501828 (+)
AMCG00021911 NA coding downstream 2226462 38120324 ~ 38121572 (+)
AMCG00021910 NA coding downstream 2243260 38137122 ~ 38142159 (+)
AMCG00021912 NA coding downstream 2501944 38395806 ~ 38397674 (+)
G89222 NA non-coding upstream 485179 35406710 ~ 35406984 (+)
G89010 NA non-coding upstream 1472106 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 1504491 34387254 ~ 34387672 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 1505961 34383959 ~ 34386202 (+)
G88980 NA non-coding upstream 1518498 34369970 ~ 34373665 (+)
G89285 NA non-coding downstream 6781 35900643 ~ 35901176 (+)
G89298 NA non-coding downstream 69896 35963758 ~ 35970466 (+)
G89329 NA non-coding downstream 353197 36247059 ~ 36248421 (+)
G89342 NA non-coding downstream 520782 36414644 ~ 36415841 (+)
G89430 NA non-coding downstream 617327 36511189 ~ 36511500 (+)
G89142 NA other upstream 628626 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 815073 34926553 ~ 35077090 (+)
AMCG00021802 kdm1b other upstream 5423243 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 5484391 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 6506838 29378575 ~ 29385325 (+)
G89299 NA other downstream 70709 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 756370 36650232 ~ 36659244 (+)
G89578 NA other downstream 2227395 38121257 ~ 38151049 (+)
G89632 NA other downstream 2924010 38817872 ~ 38822685 (+)
G89728 NA other downstream 3506662 39400524 ~ 39408261 (+)

Expression


Co-expression Network