AMCG00021884


Basic Information

Item Value
gene id AMCG00021884
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35200245 ~ 35218131 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021884
ACTTTGACAAAACTATCAAACACTTCAGCCTTAGACAGTCTCAAAATAGAATCTATTAGTCCCAAAGCAGAATTAAACTGTGCCAAAGTAGAATCGAATAGTCCCAAAATACAATCAGACGAGAACAAAATAGTGCCAGACCACAGATTCTGTGCCTGCACACACTGTATAAGTAAACCAAATGTTTCAGAATGGTTTGACAAACGTTTCAATTCCACGGCTCACCCTTTGTTGTCCAAGACAAACAGCAATCTGTCTGAGGAGCAATACCAATTTTGGAtgcAACTGCAGCCTCAAAACCCCTCCGCTTCCTATGATGTCATCATACAAAGGTTGTTGGAGCTCTTTCCCAGTGAAGACAATTATCTAGACCAAAGCCCTTCACGCTGCAGGTCTTGTGCTATAGTGGGGAACTCGGATAACCTCAGTGGATCCAATTATGGTACCATGATTGAGGAACATGACTTTGTGATGAGAGTGAACAGAGGCAAAACTGAGGGATATGAAAAGGATGTAGGGGCTAAAACAACTCATCATTTCATGTATCCAGAAAGTGCCACAAACCTAAAAAACAATACCAGGCTGGTACTGGTTCCTTTCAAAATCATTGATCTCCAGTGGCTTATCAGTGTTGCAACGAAAAGCAAAGTCTTGGTTTACCATCCAGCCTTCATCAAGTATGTTTATGACATATGGACAGAAAAGCATGGGAGATATCCTTCCACTGGATTCCTTGTGCTAATATTTGCACTTCATGTGTGTGATGAGGTGAATGTTTATGGATACGGTGCAAACAGCAAAGGTGAATGGAAACACTACTGGGAAAACATAACAGACTCCCCATATCCCTCAGTGCACAGTGGGGACAGTGaatataatactatattaaAGCTTGATGACATTGGAAAGATTAAGCTATATAAGGgaataaaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021884 True 936 mRNA 0.41 5 35200245 35218131

Neighbor

gene id symbol gene type direction distance location
AMCG00021880 NA coding upstream 24477 35108615 ~ 35175768 (+)
AMCG00021882 NA coding upstream 113741 35077101 ~ 35086504 (+)
AMCG00021883 NA coding upstream 217157 34981577 ~ 34983088 (+)
AMCG00021871 NA coding upstream 375569 34820340 ~ 34824676 (+)
AMCG00021872 NA coding upstream 463902 34718666 ~ 34736343 (+)
AMCG00021886 NA coding downstream 361828 35579959 ~ 35593338 (+)
AMCG00021894 NA coding downstream 646618 35864749 ~ 35887253 (+)
AMCG00021893 NA coding downstream 765924 35984055 ~ 36013655 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding downstream 1247655 36465786 ~ 36501828 (+)
AMCG00021911 NA coding downstream 2902193 38120324 ~ 38121572 (+)
G89010 NA non-coding upstream 780188 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 812573 34387254 ~ 34387672 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 814043 34383959 ~ 34386202 (+)
G88980 NA non-coding upstream 826580 34369970 ~ 34373665 (+)
G88938 NA non-coding upstream 1022767 34176954 ~ 34177478 (+)
G89222 NA non-coding downstream 188579 35406710 ~ 35406984 (+)
G89280 NA non-coding downstream 642785 35860916 ~ 36195602 (+)
G89283 NA non-coding downstream 674032 35892163 ~ 35893862 (+)
G89285 NA non-coding downstream 682512 35900643 ~ 35901176 (+)
G89298 NA non-coding downstream 745627 35963758 ~ 35970466 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 123155 34926553 ~ 35077090 (+)
AMCG00021802 kdm1b other upstream 4731325 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 4792473 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 5814920 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 5924898 29264827 ~ 29275347 (+)
G89299 NA other downstream 746440 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 1432101 36650232 ~ 36659244 (+)
G89578 NA other downstream 2903126 38121257 ~ 38151049 (+)
G89632 NA other downstream 3599741 38817872 ~ 38822685 (+)
G89728 NA other downstream 4182393 39400524 ~ 39408261 (+)

Expression


Co-expression Network