AMCG00021882


Basic Information

Item Value
gene id AMCG00021882
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35077101 ~ 35086504 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021882
AtgtcttcaaaaataaaattaaaagacatTTATTCTGCTCTGCATGGTGTGAATCCTGGAGCGGAGGTTGTGATTTCTACCTGTGGTCTCCGGAGTGACAGACACTATGGAAGTAGCTTCGACTCTGACAGCTTGGAGAGCCCTGAACAAGCGAGGCTGCTGGACACTGCACTGGGAGTCTCAGAAGAGCCTATTCTCAGACAAGGACTTCATCATTCAGAAACATCACACAGTCTGCCTGCCCTTCTGGATGACAGATGTGCTAATCCACAAGTAGGAGCCAGTGGTAATGAGGAGAGGATTAAGGAGCACTGCATTGAAATGTACAATGTATCTTTGACAGGAAGTAAAGATGTTCTCACCCCTGGTCAGAAAGTAGAGgAAGATGAGATGATACCAGAACTACGAATGTCTGTAACGAAAGAAGATAACAGGAGAGAGACTGAAGATTGGCAACAATGGCAAAATGAGTTTAGAGGTCAAATTCGAGCTCTGCGCCACTGGTTGAAAGGAATGGAGATGAGGCTTCCCCCTGTGGATCCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021882 True 546 mRNA 0.46 4 35077101 35086504

Neighbor

gene id symbol gene type direction distance location
AMCG00021883 NA coding upstream 94013 34981577 ~ 34983088 (+)
AMCG00021871 NA coding upstream 252425 34820340 ~ 34824676 (+)
AMCG00021872 NA coding upstream 340758 34718666 ~ 34736343 (+)
AMCG00021874 rprd1a coding upstream 360934 34699848 ~ 34716167 (+)
AMCG00021875 NA coding upstream 386434 34685015 ~ 34690667 (+)
AMCG00021880 NA coding downstream 22111 35108615 ~ 35175768 (+)
AMCG00021884 NA coding downstream 113741 35200245 ~ 35218131 (+)
AMCG00021886 NA coding downstream 493455 35579959 ~ 35593338 (+)
AMCG00021894 NA coding downstream 778245 35864749 ~ 35887253 (+)
AMCG00021893 NA coding downstream 897551 35984055 ~ 36013655 (+)
G89010 NA non-coding upstream 657044 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 689429 34387254 ~ 34387672 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 690899 34383959 ~ 34386202 (+)
G88980 NA non-coding upstream 703436 34369970 ~ 34373665 (+)
G88938 NA non-coding upstream 899623 34176954 ~ 34177478 (+)
G89222 NA non-coding downstream 320206 35406710 ~ 35406984 (+)
G89280 NA non-coding downstream 774412 35860916 ~ 36195602 (+)
G89283 NA non-coding downstream 805659 35892163 ~ 35893862 (+)
G89285 NA non-coding downstream 814139 35900643 ~ 35901176 (+)
G89298 NA non-coding downstream 877254 35963758 ~ 35970466 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 11 34926553 ~ 35077090 (+)
AMCG00021802 kdm1b other upstream 4608181 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 4669329 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 5691776 29378575 ~ 29385325 (+)
AMCG00021772 NA other upstream 5801754 29264827 ~ 29275347 (+)
G89142 NA other downstream 124629 35211133 ~ 35263537 (+)
G89299 NA other downstream 878067 35964571 ~ 35967384 (+)
AMCG00021900 NA other downstream 1563728 36650232 ~ 36659244 (+)
G89578 NA other downstream 3034753 38121257 ~ 38151049 (+)
G89632 NA other downstream 3731368 38817872 ~ 38822685 (+)

Expression


Co-expression Network