G89280


Basic Information

Item Value
gene id G89280
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35860916 ~ 36195602 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111386
ttcaaaaaagttatacattgatttgcatgtcaatgagggaaataagtatatgacccctttgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactgctctttgcagatcctctccaagtcattaaggttttgaggctgacgtttggcaactcgaaccttcagctccctccacagattttctatggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111386 True 259 lncRNA 0.44 2 35860916 36195602

Neighbor

gene id symbol gene type direction distance location
AMCG00021886 NA coding upstream 267578 35579959 ~ 35593338 (+)
AMCG00021884 NA coding upstream 642785 35200245 ~ 35218131 (+)
AMCG00021880 NA coding upstream 685148 35108615 ~ 35175768 (+)
AMCG00021882 NA coding upstream 774412 35077101 ~ 35086504 (+)
AMCG00021883 NA coding upstream 877828 34981577 ~ 34983088 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding downstream 270184 36465786 ~ 36501828 (+)
AMCG00021911 NA coding downstream 1924722 38120324 ~ 38121572 (+)
AMCG00021910 NA coding downstream 1941520 38137122 ~ 38142159 (+)
AMCG00021912 NA coding downstream 2200204 38395806 ~ 38397674 (+)
AMCG00021914 NA coding downstream 2660224 38855826 ~ 38865619 (+)
G89222 NA non-coding upstream 453932 35406710 ~ 35406984 (+)
G89010 NA non-coding upstream 1440859 34419791 ~ 34420057 (+)
G89006 NA non-coding upstream 1473244 34387254 ~ 34387672 (+)
G88981 slc6a19b,LOC106570715,LOC107596751,LOC107743232,LOC107685553,LOC107662664 non-coding upstream 1474714 34383959 ~ 34386202 (+)
G88980 NA non-coding upstream 1487251 34369970 ~ 34373665 (+)
G89329 NA non-coding downstream 51457 36247059 ~ 36248421 (+)
G89342 NA non-coding downstream 219042 36414644 ~ 36415841 (+)
G89430 NA non-coding downstream 315587 36511189 ~ 36511500 (+)
G89443 NA non-coding downstream 366405 36562007 ~ 36562413 (+)
G89448 NA non-coding downstream 400117 36595719 ~ 36615546 (+)
G89142 NA other upstream 597379 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 783826 34926553 ~ 35077090 (+)
AMCG00021802 kdm1b other upstream 5391996 30449957 ~ 30468920 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other upstream 5453144 30267402 ~ 30407772 (+)
AMCG00021779 LOC108438266,LOC105891906 other upstream 6475591 29378575 ~ 29385325 (+)
AMCG00021900 NA other downstream 454630 36650232 ~ 36659244 (+)
G89578 NA other downstream 1925655 38121257 ~ 38151049 (+)
G89632 NA other downstream 2622270 38817872 ~ 38822685 (+)
G89728 NA other downstream 3204922 39400524 ~ 39408261 (+)

Expression


Co-expression Network