XLOC_006377 (ubr2)


Basic Information

Item Value
gene id XLOC_006377
gene name ubr2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 3263853 ~ 3324773 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012382
GAAGTAAAGATGGCGGCGGCCGAGACCGATCGTGATGCACCGTCCGCTCTGTGTAGCGAATTCCTCAATTTCTCCGCTAAGGACACCGCTGCGAAATGGCTACAGGTGAGCAACCTACCCAAAGAGGTGTACCAGCACTTGGCCTGCTATGTCCCCAAGATCTACTGCCTGGGTCCCAACCTCAACCCTCAGAACGAGGACCTGCTTGCTCAGCTGCTGCTTCAGGGCCCGCTGGAGTGGTATCTGTGTGGGGAAGAGCCGTCCGTGGGCTTGTCCAAACTCGAACAGAACAACCAGCCGTCACAACTTTGTGGCCATGTGTTTAAAGTGGGAGAGCCAACATACTCCTGCAGGGAGTGTGCAGCCGATCCGACCTGTGTGCTGTGTATGCAGTGCTTCTTAGGCAGCGTCCACAAAGAGCATCGCTACAGGATGACAACCTCAGGAGGAGGAGGCTTCTGCGACTGTGGAGACACAGAGGCCTGGAAGAAGGGTCCTTACTGTCAAAAACACGAGCCTAATATCAGTGACTCCTCCCAGAAGGATCCTTTAGCGAATCTGTCTGCTGAGATGATCGCTCGCACGTATAATGTTTTCTCCATCATCCTCAAATATGCAGTGGACATGCTCACCTGGGACAAAGAGGACGAGCTGCCTGAAGGCCTCGAGCCACCggCACGTGGAGATATGTACTACTGCATGCTGTTCAACGATGAGGTCCACACGTACGAGCAGGTCATCTATACACTACAGAAAGCTGTGAACTGCACCCAGAAAGAGGCCGTCAGTTTCGCCACCACCGTGGACAGAGATGGCAGGAAGTCTGTTCGCTTTGGGGACTTCCAGTTTTGCGAGCAGGCCAAATCTGTTATTGTGAGAAACACGAGTCGGCAGACGAAACCTCTGCGGGTTCAGGTCATGCACTCTTCTGTAGTGGCTCATCAGTGTTTTGCACTCAAAGCTCTGAACTGGCTTGGCCAAACCATCAGATACTCAGATGCTCTGAGGAGGATCTTGTGTCAGGTGGGTCTGCAGAGAGGACCGGAGGGAGAAAACTCCTCTCTAGTGGACAAACTCATGCTCTGTGACTCCAAGATGTGGAAAGGAGCGAGAAATGTTTACCATCAGCTCTTTATGAGCAGTCTACTCATGGATCCGAAGTACAAGAAACTTTTTGCTATCCAGTTTGCGAGGAGTTACCAGCGCCTTCAGACAGATTTTATGGAGGACGATCACGAGCGTGTAGTGTCAGTGACCTCTCTGTCAGTGCAGCTCTTCACCGCGCCTACTGTGGCGCGGATGCTGATCACAGATGAGAATCTGATGACCACCATCATCCGCACGTTCGTGGATCACCTCAGACACCGAGACCTGCAGGGCCGCTTCCAGTTTGAACGCTACACCGCACAACAGGCCTTCAAATTCCGCCGAGTCCAGAGCCTTATCGGAGACCTCAAGTATGTCTTGATCAGCCGTCCAACAGAGTGGACCGACCAACTCAGGGAGAAGTATCTGGAAGGTTTTGATGCTTTCTTGGAGTTGCTTAAATGCATGCAGGGAATGGACCCGGTTGTGCGCCAGGTGGGGCAGCACATAGAGATGGAGCCAGAATGGGAGGCAGCGTTTACCTTACAGATGAAGCTCACACATATCATCTCCATGATGCAGGAGTGGTGTGCCAGTGACGAGAGAGTGCTGATTGAAGCGTATAAGAAGAGCCTGAGTGCACTGACTCACTGCCACAGCGGTTTCACAGACGGAGAGCAGCCTATAACCCTCAGCATGTGCGGTCACTCCGTCGACACCATCCGCTACTGCGTCTCTCAGGAGAAAGTGAGCATACACCTGCCTGTGTCCCGGCTTCTAGCAGGTTTACATGCTCTGCTGAGCAAAATTGAGGTTGCCTATCGATTCCCCGAGCAGCTTCCTCTGAGTGAACTAAGTCCACCCATGCTGATCGAACACCCGCTCCGCTGCCTTGTACTCTGTGCCCAGGTGCATGCTGGGATGTGGAGAAGAAACGGCTTCTCTTTGGTTAATCAGATATATTATTATCACAATGTGAAGTGTAGAGTGGAGATGTTTGATAAAGACCTCATCATGCTTCAGGCTGGAGCTTCCATGATGGATCCAAACCACTTCCTGATGATCATGTTGAGTCGTTTTGAGCTCTATCATATCTTCAGCTCAGCAGACTGCAGAAAGAGATACAGCCGAGAGAACGCAAATAAGGATGTGGTTCAGCAAAATAACACCCTAATAGAGGAAATGCTGCACTTGATCATTATGATCGTGGGTGAGCGCTACACAGCAGGTGTCGGTCAGGTGGAGATCACGGATGAGATCAGACGAGAGATCGTTCACCAGCTCTGCATTCGACCCATGGCCCACAGCGAGCTGGTCAAAGCACTGCCTGAGAATGAGAACAAGGAGACAGGAATGGAGAGGGTCATCGATAGTGTGGCTTTGTTTAAGAAGCCTGGCGTGACGGGTAGAGGACTCTATAAACTCAGACCAGAGTGTGCCAAGATGTTCAATCTTTACTTCCACCATTACTCCAGAGCTGACCAGTCTAAGGCTGAAGAAGctcaaagaaaaataaagaggCAAAATGGGGAAGATTCAGTTCTGCCTCCACCAGTCCTGCCTCGCTTCTGTCCGCTGTTTGCCAGTCTGGTGAACATCCTGCAGTGTGACGTGCTGCTGGGCATTCTAGGAGCTGTTCTGCAGTGGGCAATGGAGCCTAGTGGAGGACACTGGTCTGAGTCCATGCTTCAGAGGGTGCTGCATCTCATTGGGATGGGGCTGGTGGAAGAACAGCAGCATCTCATCAGCAGCGCAGAAGACTATAATGATACCAACTTCAATTTCACTCTCAAAATCTCCAGACCCGGCGAGGCTCCTGCTAACACTGCCAGCATCTTGGCTTTACTGGAGACGCTGCAGAACGCTCCTCATCTGGAGGTGCACAAGGACATGATCCGCTGGATCCTCAAGactgTGGCCTACATCAAAACCACGCGTGAGTGCACAGCCAGTGCGCCCCCCAGTGACAGCTCAGGGCACAGTCAAGAGGAGACGGTGCGGGATAAGGAAAAGGCGGAGCGGAAGAGGAAAGCGGAGATGGCGCGACTCAGGAGAGAGAAAATCATGGCTCAGATGTCAGAGATGCAGAGACACTTCATCAACGAGAACAAAGAGTTGTTCCAGCAGAGCCTGGAGGACCTGGACCCCTCCACATCCTCCACGCTGGAGCACAGCCCCAGCTCGTGTGACAGTGCTCTGGTGTGTGTGGGCCCGCGGCGCTGGCGAGCAGGTGGCAGCGACCGCAGGCAGGTGGTGACATGTATCCTGTGCCAGGAGGAGCAGGAGATCCGTAGCGACGGCAAAGCCATGGTCCTCGCTGCATTCGTCCAGCGCTCCACTGTCATGTCCAAAAACCGCAAGAGACCACCACACAACCCAGATAAATATGACCCCCTGTTCATGCACCCCGACCTGTCGTTCGGCACACACACGGGCAGCTGTGGACACATCATGCACTCGCACTGCTGGCAGAGGTATTTTGAGGCGGTGCAGGCTAAAGAGCAGCGCAGGCAGCAGAGGCTCCGTGTGCACACTAGTTATGACGTGGAGAACGGAGAGTTTTTGTGTCCACTCTGCGAATGTCTGAGTAACACAGTCATTCCTCTGCTGCCACTCACTAAGACCTGCTGCAGCTCTGAACAGCCTGATCTGAGCCAGTGGTTAAACATCACCTCTCATCAGATGAAAGCCCTGATCTCTGCTCACAGGAAGTCCAAAACCAGCAGTGCTGAAGCTGCTGATGAAACAGACGGTGTCAATGACTGTCCACCACCTGATGGCTTCAGACTAGATCACACTCCAAAAAATCCATATTCAAGCACCATAAAGGAGATGCTGACTACGTTTGGGACAGCCACGTATAAAGTGGGTCTGAAAGTGCACCCGAATGAGCAGGACCCCCGAGTGCCAATCATGTGCTGGGGCAGCTGTGCCTACACCATCCAGTCTATAGAGAGATTACTGGTGGATGAAGAGAAGCCTTTGTTTGGAAGTTTACCATGCAGACAGGACGACTGTTTGAGTTCTCTGACGCGGTTTGGCTCTGCCTGCTGGACAGTCTCCTCTCATACCACTGTACAGAATCACTTCATCAGGCTCTTAGCAGCCCTTGTTCCTGATCCCCGGGTGGAGAATACCCCTTGTATTCTGGATGTAGACATGTTTCACTTGCTGGTGAGTTTGGTGCTGTCCCATCCAGCAGTTCTCTGTCTGGATTCCTCAGGGCTCAGCGCAGATGCTGCACAACTGCACTTCTTGCACCTGATCACAGTCGCTCACGTTGTCCAGATCCTCCTGACCTCTTTACCTGAGGAGGTGCGGATGGAGCAGGAGACTGGAGGAGCCGAGAGAGAAGAGGAGgagagtgtgtgtttgctctACAATACTCTCAGGAGTCTGCTGGGCCGTGGCTTGCGCGAGGTGAGCTCAGGCTGGCATCTGTGGCGCTGTGTGAAAGCTGGAATCCTGCCTTATCTGAGAGCCGCCGCTCTCTTCTTCCACTATCTCAACGGAGCTCCAGCACCACCGGAGTTACACGCTCTAGGTGCGGGTGAATGGGAGGCTCTGTGTGGATACCTGTGTCTGCCTTCCAACCTGCTACAGCTCTACTTCAACAATCTAGACATCATGGAGCCTCTGTTGCATGGGTGGTGTTCTCATCCAGCTCTTCAGGCTCTTCAGAGCAGCGTGACTCTCATCAGGTTTCCCAGAGAGTCCAATCATCTCATCGATCTGCCGGGCGACTACAGCGCGTTGATCAACCAGGCCTCCAGCTTCACGTGTCCTAAATCTGGAGGAGATAAGTCTCGCGTTCCTACTCTGTGTCTGGTGTGCGGTGCCATGCTCTGCTCTCAGAGCTACTGCTGTCAGACGGAGCTGGAAGGAGAAGACGTGGGGGCCTGTACCGCACACACTTTCACCTGCGGAGCCGGAGTCGGCATCTTCCTCAGGGTGAGGGAAAGTCAGGTCCTGTTCCTGGCTGGCAAAACTAAGGGCTGTTTTTATGCTCCCCCATACCTGGATGACTATGGAGAAACAGACCAAGGGCTAAGACGGGGGAACCCATTACACTTGTGCCATGAGCGCTACAGAAAGATCCAGAAGCTGTGGCGTCAGCACAGCATCACGGAGGAGATCGGCCACGCTCAGGAGGCCAATCAGACTTTGGTGGGCATCGACTGGCAGCATCTGTGAACTTGCAtttctcacatttacacacaaaggGGACCCGCACAGCAGGGCCAGAGGCTCCACGCCGTGTCTCTCGCTCTTCCTCCACCCCTTTCTCCATCTTTCTGACAGTGGACGAATGCATGACTTCTCTTTTCTTTTCGTCTTTTGATGGAGACGTCTCCATTTTTTTCGTTTgaatatgaaataaatacatatttaaaaagacatatAGCCAAGGTGTTGAACCGCAACCAATGAGGGTTCCTTATTTGCAACAGATATTCTTCATAGGAATGATATTTAATTTCTTCTCCAactaatgttaaattattttggagGGAATTATTTCGCTTCCACATATAGGTTTCTTCGCAAGACACTACTCTTATCGCTTTGGGAGTGCTGTCCTTCAAGTAAGCACAAATATCCCTCAAAGCCCAAGCAGGGATAGCGCCACCTGTAGGATACACGCCGCATTCTCTTTGCCCCCTTCATCTCAAAGGCTGCAATACATTAtgagttaaggccacctaattaATGTGCTCTGCCAACGCACATGAATATGTCCTTCGAACGCTCGGTTTCTGTTTGTCTGGGTCCTGTATGAGTGAGTTTTTACGTGCCGGTGTGTAGTTGGTATGTTTGTTATACGATGGTTTTTCTAAGGTGGTTCGTTTTTTTAtgactgttgttgttgtgttgttgtgaAGCTTATTTATGTGTTTCTGGCAGATGTTTGTTGTGTTTAACTCAAATCTATGGAGTCATGCTTTTCACAAAGTTGAACATGACTTCCATTCTTACACATGA
>TCONS_00012383
ATGGCGGCGGCCGAGACCGATCGTGATGCACCGTCCGCTCTGTGTAGCGAATTCCTCAATTTCTCCGCTAAGGACACCGCTGCGAAATGGCTACAGGTGAGCAACCTACCCAAAGAGGTGTACCAGCACTTGGCCTGCTATGTCCCCAAGATCTACTGCCTGGGTCCCAACCTCAACCCTCAGAACGAGGACCTGCTTGCTCAGCTGCTGCTTCAGGGCCCGCTGGAGTGGTATCTGTGTGGGGAAGAGCCGTCCGTGGGCTTGTCCAAACTCGAACAGAACAACCAGCCGTCACAACTTTGTGGCCATGTGTTTAAAGTGGGAGAGCCAACATACTCCTGCAGGGAGTGTGCAGCCGATCCGACCTGTGTGCTGTGTATGCAGTGCTTCTTAGGCAGCGTCCACAAAGAGCATCGCTACAGGATGACAACCTCAGGAGGAGGAGGCTTCTGCGACTGTGGAGACACAGAGGCCTGGAAGAAGGGTCCTTACTGTCAAAAACACGAGCCTAATATCAGTGACTCCTCCCAGAAGGATCCTTTAGCGAATCTGTCTGCTGAGATGATCGCTCGCACGTATAATGTTTTCTCCATCATCCTCAAATATGCAGTGGACATGCTCACCTGGGACAAAGAGGACGAGCTGCCTGAAGGCCTCGAGCCACCggCACGTGGAGATATGTACTACTGCATGCTGTTCAACGATGAGGTCCACACGTACGAGCAGGTCATCTATACACTACAGAAAGCTGTGAACTGCACCCAGAAAGAGGCCGTCAGTTTCGCCACCACCGTGGACAGAGATGGCAGGAAGTCTGTTCGCTTTGGGGACTTCCAGTTTTGCGAGCAGGCCAAATCTGTTATTGTGAGAAACACGAGTCGGCAGACGAAACCTCTGCGGGTTCAGGTCATGCACTCTTCTGTAGTGGCTCATCAGTGTTTTGCACTCAAAGCTCTGAACTGGCTTGGCCAAACCATCAGATACTCAGATGCTCTGAGGAGGATCTTGTGTCAGGTGGGTCTGCAGAGAGGACCGGAGGGAGAAAACTCCTCTCTAGTGGACAAACTCATGCTCTGTGACTCCAAGATGTGGAAAGGAGCGAGAAATGTTTACCATCAGCTCTTTATGAGCAGTCTACTCATGGATCCGAAGTACAAGAAACTTTTTTACATTCAATCCCAcactcctctcctctttctctctctcttttgcctCTCCTCGCCTCCTTCACGCTTCCTCGACTATGTGAAGGACGACCACGACAGGGAGTTCTCCGTCACTGATCTTTCTGTGCAAATGTTCACCGTGCCTTCTCTGGCGCGGATGCTGATCACAGATGAGAATCTGATGACCACCATCATCCGCACGTTCGTGGATCACCTCAGACACCGAGACCTGCAGGGCCGCTTCCAGTTTGAACGCTACACCGCACAACAGGCCTTCAAATTCCGCCGAGTCCAGAGCCTTATCGGAGACCTCAAGTATGTCTTGATCAGCCGTCCAACAGAGTGGACCGACCAACTCAGGGAGAAGTATCTGGAAGGTTTTGATGCTTTCTTGGAGTTGCTTAAATGCATGCAGGGAATGGACCCGGTTGTGCGCCAGGTGGGGCAGCACATAGAGATGGAGCCAGAATGGGAGGCAGCGTTTACCTTACAGATGAAGCTCACACATATCATCTCCATGATGCAGGAGTGGTGTGCCAGTGACGAGAGAGTGCTGATTGAAGCGTATAAGAAGAGCCTGAGTGCACTGACTCACTGCCACAGCGGTTTCACAGACGGAGAGCAGCCTATAACCCTCAGCATGTGCGGTCACTCCGTCGACACCATCCGCTACTGCGTCTCTCAGGAGAAAGTGAGCATACACCTGCCTGTGTCCCGGCTTCTAGCAGGTTTACATGCTCTGCTGAGCAAAATTGAGGTTGCCTATCGATTCCCCGAGCAGCTTCCTCTGAGTGAACTAAGTCCACCCATGCTGATCGAACACCCGCTCCGCTGCCTTGTACTCTGTGCCCAGGTGCATGCTGGGATGTGGAGAAGAAACGGCTTCTCTTTGGTTAATCAGATATATTATTATCACAATGTGAAGTGTAGAGTGGAGATGTTTGATAAAGACCTCATCATGCTTCAGGCTGGAGCTTCCATGATGGATCCAAACCACTTCCTGATGATCATGTTGAGTCGTTTTGAGCTCTATCATATCTTCAGCTCAGCAGACTGCAGAAAGAGATACAGCCGAGAGAACGCAAATAAGGATGTGGTTCAGCAAAATAACACCCTAATAGAGGAAATGCTGCACTTGATCATTATGATCGTGGGTGAGCGCTACACAGCAGGTGTCGGTCAGGTGGAGATCACGGATGAGATCAGACGAGAGATCGTTCACCAGCTCTGCATTCGACCCATGGCCCACAGCGAGCTGGTCAAAGCACTGCCTGAGAATGAGAACAAGGAGACAGGAATGGAGAGGGTCATCGATAGTGTGGCTTTGTTTAAGAAGCCTGGCGTGACGGGTAGAGGACTCTATAAACTCAGACCAGAGTGTGCCAAGATGTTCAATCTTTACTTCCACCATTACTCCAGAGCTGACCAGTCTAAGGCTGAAGAAGctcaaagaaaaataaagaggCAAAATGGGGAAGATTCAGTTCTGCCTCCACCAGTCCTGCCTCGCTTCTGTCCGCTGTTTGCCAGTCTGGTGAACATCCTGCAGTGTGACGTGCTGCTGGGCATTCTAGGAGCTGTTCTGCAGTGGGCAATGGAGCCTAGTGGAGGACACTGGTCTGAGTCCATGCTTCAGAGGGTGCTGCATCTCATTGGGATGGGGCTGGTGGAAGAACAGCAGCATCTCATCAGCAGCGCAGAAGACTATAATGATACCAACTTCAATTTCACTCTCAAAATCTCCAGACCCGGCGAGGCTCCTGCTAACACTGCCAGCATCTTGGCTTTACTGGAGACGCTGCAGAACGCTCCTCATCTGGAGGTGCACAAGGACATGATCCGCTGGATCCTCAAGGTAAAGCTGATCAAAAGCTCATTACCAAGCCACCTGTTACTGGAATGCatctgtACGGTGCGGGATAAGGAAAAGGCGGAGCGGAAGAGGAAAGCGGAGATGGCGCGACTCAGGAGAGAGAAAATCATGGCTCAGATGTCAGAGATGCAGAGACACTTCATCAACGAGAACAAAGAGTTGTTCCAGCAGAGCCTGGAGGACCTGGACCCCTCCACATCCTCCACGCTGGAGCACAGCCCCAGCTCGTGTGACAGTGCTCTGGTGTGTGTGGGCCCGCGGCGCTGGCGAGCAGGTGGCAGCGACCGCAGGCAGGTGGTGACATGTATCCTGTGCCAGGAGGAGCAGGAGATCCGTAGCGACGGCAAAGCCATGGTCCTCGCTGCATTCGTCCAGCGCTCCACTGTCATGTCCAAAAACCGCAAGAGACCACCACACAACCCAGATAAATATGACCCCCTGTTCATGCACCCCGACCTGTCGTTCGGCACACACACGGGCAGCTGTGGACACATCATGCACTCGCACTGCTGGCAGAGGTATTTTGAGGCGGTGCAGGCTAAAGAGCAGCGCAGGCAGCAGAGGCTCCGTGTGCACACTAGTTATGACGTGGAGAACGGAGAGTTTTTGTGTCCACTCTGCGAATGTCTGAGTAACACAGTCATTCCTCTGCTCTCTGAACAGCCTGATCTGAGCCAGTGGTTAAACATCACCTCTCATCAGATGAAAGCCCTGATCTCTGCTCACAGGAAGTCCAAAACCAGCAGTGACATGTTTTTACTCATCAGAAATCCATATTCAAGCACCATAAAGGAGATGCTGACTACGTTTGGGACAGCCACGTATAAAGTGGGTCTGAAAGTGCACCCGAATGAGCAGGACCCCCGAGTGCCAATCATGTGCTGGGGCAGCTGTGCCTACACCATCCAGTCTATAGAGAGATTACTGGTGGATGAAGAGAAGCCTTTGTTTGGAAGTTTACCATGCAGACAGGACGACTGTTTGAGTTCTCTGACGCGGTTTGGCTCTGCCTGCTGGACAGTCTCCTCTCATACCACTGTACAGAATCACTTCATCAGGCTCTTAGCAGCCCTTGTTCCTGATCCCCGGGTGGAGAATACCCCTTGTATTCTGGATGTAGACATGTTTCACTTGCTGGTGAGTTTGGTGCTGTCCCATCCAGCAGTTCTCTGTCTGGATTCCTCAGGGCTCAGCGCAGATGCTGCACAACTGCACTTCTTGCACCTGATCACAGTCGCTCACGTTGTCCAGATCCTCCTGACCTCTTTACCTGAGGAGGTGCGGATGGAGCAGGAGACTGGAGGAGCCGAGAGAGAAGAGGAGgagagtgtgtgtttgctctACAATACTCTCAGGAGTCTGCTGGGCCGTGGCTTGCGCGAGGTGAGCTCAGGCTGGCATCTGTGGCGCTGTGTGAAAGCTGGAATCCTGCCTTATCTGAGAGCCGCCGCTCTCTTCTTCCACTATCTCAACGGAGCTCCAGCACCACCGGAGTTACACGCTCTAGGTGCGGGTGAATGGGAGGCTCTGTGTGGATACCTGTGTCTGCCTTCCAACCTGCTACAGCTCTACTTCAACAATCTAGACATCATGGAGCCTCTGTTGCATGGGTTTCCCAGAGAGTCCAATCATCTCATCGATCTGCCGGGCGACTACAGCGCGTTGATCAACCAGGCCTCCAGCTTCACGTGTCCTAAATCTGGAGGAGATAAGTCTCGCGTTCCTACTCTGTGTCTGGTGTGCGGTGCCATGCTCTGCTCTCAGAGCTACTGCTGTCAGACGGAGCTGGAAGGAGAAGACGTGGGGGCCTGTACCGCACACACTTTCACCTGCGGAGCCGGAGTCGGCATCTTCCTCAGGGTGAGGGAAAGTCAGGTCCTGTTCCTGGCTGGCAAAACTAAGGGCTGTTTTTATGCTCCCCCATACCTGGATGACTATGGAGAAACAGACCAAGGGCTAAGACGGGGGAACCCATTACACTTGTGCCATGAGCGCTACAGAAAGATCCAGAAGCTGTGGCGTCAGCACAGCATCACGGAGGAGATCGGCCACGCTCAGGAGGCCAATCAGACTTTGGTGGGCATCGACTGGCAGCATCTGTGA

Function

symbol description
ubr2 Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in chromatin silencing; histone H2A ubiquitination; and ubiquitin-dependent protein catabolic process via the N-end rule pathway. Predicted to act upstream of or within protein catabolic process. Predicted to be part of ubiquitin ligase complex. Predicted to be active in cytoplasm. Is expressed in female organism. Orthologous to human UBR2 (ubiquitin protein ligase E3 component n-recognin 2).

GO:

id name namespace
GO:0006342 chromatin silencing biological_process
GO:0030163 protein catabolic process biological_process
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway biological_process
GO:0016567 protein ubiquitination biological_process
GO:0033522 histone H2A ubiquitination biological_process
GO:0000151 ubiquitin ligase complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0061630 ubiquitin protein ligase activity molecular_function

KEGG:

id description
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-081107-29 Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in chromatin silencing; histone H2A ubiquitination; and ubiquitin-dependent protein catabolic process via the N-end rule pathway. Predicted to act upstream of or within protein catabolic process. Predicted to be part of ubiquitin ligase complex. Predicted to be active in cytoplasm. Is expressed in female organism. Orthologous to human UBR2 (ubiquitin protein ligase E3 component n-recognin 2).

Ensembl:

ensembl_id ENSDARG00000070164

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012382 False 6069 mRNA 0.52 47 3263853 3324773
TCONS_00012383 True 5142 mRNA 0.53 45 3264642 3324764

Neighbor

gene id symbol gene type direction distance location
XLOC_006376 AL935294.1 coding downstream 20595 3198438 ~ 3243258 (-)
XLOC_006375 pkdcca coding downstream 108609 3109064 ~ 3155244 (-)
XLOC_006374 LO018354.1 coding downstream 208916 3054823 ~ 3054937 (-)
XLOC_006373 EML4 coding downstream 282381 2927637 ~ 2981472 (-)
XLOC_006372 NA coding downstream 339729 2919298 ~ 2924124 (-)
XLOC_006378 si:ch73-193i2.2 coding upstream 2644 3327417 ~ 3351708 (-)
XLOC_006379 prkn coding upstream 30122 3354895 ~ 3516473 (-)
XLOC_006380 si:ch211-128m15.3 coding upstream 549642 3874415 ~ 3879323 (-)
XLOC_006381 ncoa4 coding upstream 590487 3915260 ~ 3936555 (-)
XLOC_006382 NA coding upstream 635324 3960097 ~ 3961271 (-)
XLOC_006338 rn7sk misc downstream 2437628 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 6939968 10264741 ~ 10264905 (-)
XLOC_006371 NA non-coding downstream 355698 2899327 ~ 2908155 (-)
XLOC_006370 BX571701.3 non-coding downstream 404442 2857461 ~ 2859411 (-)
XLOC_006388 NA non-coding upstream 1080519 4405292 ~ 4407072 (-)
XLOC_006389 NA non-coding upstream 1083084 4407857 ~ 4408486 (-)
XLOC_006390 CR854838.1 non-coding upstream 1120780 4445553 ~ 4447653 (-)
XLOC_006393 CU856520.1 non-coding upstream 1387648 4712421 ~ 4714106 (-)

Expression


Co-expression Network