XLOC_006383 (tjap1)


Basic Information

Item Value
gene id XLOC_006383
gene name tjap1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 3979341 ~ 4134141 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012391
TAAAAGATGTCTGCTTTTACATAATTAGAATAAAACAGTTCAAGCTGTGCATGATAGACTTTTGTTTGAAGAGGAAATGTTGTACTGTTGTTCTTTATTGTACATATtatctaaatatatattgtgCCAAGGTCATAGGCCAACAAAGCTGGTAGAGTGCTTTTGCATTGTACAGAGAATCATATAGCATCGTGATCGACTTTTAAACcctcacactgatgttttttttcccctccacaGACTTCAGAACAGCTACACGGCATCTCAGAGAGCTAATCAAGACCTGGAGGAGAAACTTCACGCCCTGCTCCGTAAAGTGGAAAGAGACAAGAAAACTATGGATCAAGAGATAGTGGAGCTCACCAATAAACTTGTGGACGCCAAAAATACCATCGACAAGCTGGAGGAGCTGAACGAACGCTATCGACAGGATTGCAATCTGGCCGTGCAGCTGTTGAAGTGCAATAAATCGCATTTCAGGAACCACAAGTTTGCTGATTTGCCATATGAGCTACAGGACATGGTGAACAAGCATATGAAGAGCAGCTTGCCCAACAAGACTCAGGGAGCTCAAGCCCAGGATCCTGACACTCTAAGCCTGACTCCTGCAGATGTAGTGCCCACTTCGGTCATTGCTCGTGTTCTTGAGAAACCCGAGCCCCTGGTGCTCAACTCGGCTCAGTCTAGCAGCAGTGCAGGTCGGCCTGTGGCTGAGGATGTCTTTGTACACGTGGACATGACGGGACCACAAGATGATGATGGAGGGCGGGAAAATGGTGGTCCTGTTCCTGCTAGGCCTCCTGCGGTAGCTGATACTGACCAGCAGCATGTCAATGGCATGTGTCGAAGCCAGGGCAGCCTTGATGGTCCTACAGGAGATGATGGTGCAGCTCCCTCTTTCGAGAAGCTGAATCCTTACCCTACTCCTTCACCACCAAACCCGCTCTACCCAGGTCGCAAAGTGATTGAGTTTTCTTCTGATGATAAAGTCAAGATCCCCAAGAACAGCCCACTGCCCAATTGCACCTACGCTACTCGTCAGGCTATTTCTTTGAGTCTTGTGCAGAATGAAGAAGAGGCAGCCGAGCGCCAGCGCACAGTGCCTAATAGCCCTGCCATATCTGATGGGGGTTGGCGATCTGGAACCTCCTCATCTTCCGGTGGAGGGATTGCTTCTCACCAGAGGACACCTCCACAGATGGATGCTACAGACACACTCTCCAGTCATTCAAGTCCCTTTAGCAGCCCCCCTCAGCCGCCCAGCGCCTTTGCCAGTTCTGGAAGCTCCGAGGAGGACCTTCTAGCCAGCTGGCAGCGCATGTTTGTTGAAAAAATGGCACCTTCTTCAGATGGCTCCCTTGTCAACCGCACATCCTTCAGCAGTGAGACGGTAAAAGATCTCCAAAGAAGTCATAATGGAAAATCAGGAGTTGGTGCTCTGAGAGGTGCTTACTCTGATGGTGAGGAGGGATCCTCGGCTCAGAGCTGGACAGCAAGTAGAGAGTCAAGTTTGGACACAGACACCAGCAGCATGGCAGACCTTCGGGCAAAGAAGACACAATATGGTGGCGACTTTTCCCATGAAGAAGGTGAACACCTTCTGATGGCTCTGGATCCACTTGATAATGATGGTGCTAGCGGTGACACTATGGTCACCATTGAGAGTAGTCCTGCCTCTGCGAAGCGTCAAGAGTTTGCAGAAGATGTTGGATCGGCGGGAAGTTCAGCAGAAGAGCGAGATGTCCTTCCCCAGGACTTTCCTGTCATTGGCTCAAGGGTTCTTTCTTCCCTTGAGGATTATGCAGATAAGCCCCCTCGGACTGGCTCCTCGCGACCTCTGAAGAGTCCCAAGAGGATGGGGGTTCATCACTTGCACCGCAAAGACAGCCTTACCAGAGCCCAGGAGCATGGCAACTTGCTAGACTGAGACTTCCAGACttgtttttctccttttttttctttttcattttaaccTCGAGTGCTCTTCGTCTTACTAGCAATCACTAGTCATAGCAGCACACAACAAGTGGAAGGCATGGGATCAGGCTCGATGCGGTTATCCCAGAGTATGCTGCTGTTGctactcttctgtcctctttttAAGGCACGGAGCACTCTTTATCTCTGGAACCGACAGTATTGATGGGATCCACGGAGAGGTACCGGCTGCACCTTCTCTTAGTCCGGCTATTTTGAGTGGACAGTGCTTCAGGGATAATACAAGAATGTCATAGCCTGTATTAAGGTGGATTTCACCAGTTCAAGCCTTGCTTCTGCTTGATGCGCAGTGATTGAGTGGGCGACAGCAGTACACAGCCATACAATCACACCTCCGCAAGAGGAAGAGTTCTTCAGAGGCGACAAGATTGAGCAGCATTAAATGTGATCTTCGTGGCACTGTGCGGACATGGAACTTTTCAAATAATGGATGTTTTGACATTCACTTTTGCCCTCGGGTGAGAGTTGTCTACCCAGATAATGAAATCTATTCAGTATCCCAGTACAAGCCCCTTGTTTCGGGAGATTGGGATGGCACTGACGGTCACAGCTTCACAGATACCACTGTGTCAGGCATTCTGCTGATTGAAGCAGGTTAAATGTAATCTATGGGACTCTCTTGTCAATTTTCAGTGCCTAACCCTTGCTCTGACAGAGGGGGCTCTCCATCACCCTTTAAATGAACATCCTATACCTTTAGTCAGCTTTTAGTCATCACAAACCTAGAGGATCCTTCACCTCAGATGTTCAGTTGTCTCTCTTTATTTCCTCACCCAAACCTAAGGACAGCTTTTTGTACAATCTTAAACCATTCATGAAAGGATTTTAATTTTGATGTATTCAATATGTTTTAATGATCAAGTACTCGGAGATACTTCCTGATTTCATTCTGTTTCGTTTGACTAATGATATTTAAGACGGATTATGATTTCAAGTAaacattttgtgtatttatttgtcttttgcTGGTCTCATCACTTGCCATCCAAAGCAGTTAACCAGAAGTCTAAAGAAGTGTGCAGGTTCCTGAATCCTGAAATTAAGGTATGCAATCTACTACATCAGTTATTACACTGTAATATGCACCTCAAACAGTGCTGTATTTGCAATCTGTTTCAAAAGTCAGTATTTAAGAGTTGGATATGACACAAGTTAAGCAGAAACATTTGGATTTATTATTTGGTATTTTTTGTCCTCCAATTTCGAACAGCTGACAACACAAATTTTCATTCAGAGGGCATATTAATATTTCAAATCTATGCATATAGTGCTGTTTTAAAAATACCTTTACAAAGGATACTGTCTCTACTGataaccagtgcttaatttgtaccGGAACAAgccggatccggcacctcattttactgatccccctcctcaTTGCATGAACCCCCTCCGCAACTACAATTACAACTTTGTCCGCAACTttccaaccctcttcactttcgtctgtgACACCCCCATATCCCcctaacacccccccccccctaccCCCCCCTCctcttcatttttgtttgtgaCACCCCCCGTACCCCCACCCACCCGGAGAATCACTTTCGTTCACAACACATCTCTCCTTCCCCGCTCATTACTTTCGTCCCAGACACCTCTCCCTCTCTGGTAACATGCCAGACCTCGTGTTCTgggacctcgcaatttacaaagTAAGCACTGCATatattttactgatccccctcctcaTCACACAAACCCCCCTCTACAACTACAACTTTTTCCGttactccccaaccctcttcactttcgtctgtgACACACCTACATCCCCCCTCCCCCCCGCTCTTCAATTTCGTTTGCGACACCTCTCCCTCCTCTGGTAACATGCCAGATCCGTTACTCtaatctgttccgggacctcgcaatttacGAATTAATTTCTGCTGATATTACACAATTCCCTCTCCTAATCGCACAAACCCCCTCCGCTACCACAACATAACTTTTTCCGCGACTCCcaaaccctcttcactttcgtctgcaaCACACCTCCCCATCCTAACCCAACACCTCCCCATCCCCACTCTTCAATTTCATCCGTGAAACCTTCCTCTGGTAACATGCCAgatccgttaccccgatctgttccggaacctcgcaatttacaaattaagcactgctgaTATTTTACCGATACCCCTTCCCATCGCACGAACCCCTGCCACAGCTACAACTACAACTTCCTCCGCGACTCCCAAACCCTATTCACTTTCGTCTGCAATACACCTCCCCATCACAACCCACCCAACACCCCCACCCTCGCTCTTCAATTTCATCCGCGAAACCTCTCCTTCCTCTGGTAACATGCCGGATAcgttaccctgatctgttccgggacctcgcaatttacaaattaagcactggtaaTAATGTTCTGATCTTGCATACAGTTGACGAGAAAAAAAAGATACTGAAATTTCAGCCAGAAACATGCCTGTGATGGAATGGCGCTAAAACATTTTGTTAAATCCCAGATTTAAAGGAAGCCATGTTTTGATCTTAACGAATGTAATCGTCTTTtatgtagcatttgtttttctttggttCCTCACTATAACCCATCATACTGCTGTATGGCTGTCTTTTAAGGGGAATGTGCGCCCCACCAtcatttagtgtgttttttttttctgtgtgtattTTCTGTGTGCAAATCTGAACTGTCCTGATTATGTGTGGAAATCTGAACTGTCTTGATTGTGGATGATTAGTCTGTCCAGCagctgtttgttttctttgtgttcatcttaaAATCTTTGTTATTTCAAGCTTTGTTCAGATAGCATTTATCAGCTTTTCTCAAATGAGTTTCAGATGCAACCACTGAAAGCATCCTCATTCTTTTGTTTTtgatgaatatattttagagacGAATAAACTCTGTGTTGCCTTTTTAAATGTGTCTTGCTTTGTGTTCTCTTCATTTAAGAGTCTTAGTCTCTTGGCCAGTCATTTTCGAGATTTCCCAATTGTGGTTGAAGCACTGTAGGCTACGCTATTCTGTGTTGTACTTCAGAAATCGACTAGTGCTCTCAAACGATCAATCGCATCCAAAATTGATGTTTGCCTTTACATCATTTGGGACCCAGGACTATAAAGATCCATTTTTATACATCATCTGAATGCTGAATAAACCTAAAATGCTGAATCATTTCCACTAGCTTTCCATGGGACATTATTTGGCTGAGGTTTTGAAAATTTGTAATCTAAGGGGTTCAGAAatgtctaaatattttaaaagattttttttttaattcttagcattttatataaataatataacttcataactaataaaaaatatgaatatatatatgaaaaataacatactagcagtgccatatggctgtTTGAGGCTTAGAGGCTCCAGGTCGTAGGCCgaatgccttagtgtcccaccagtgacgatatataGCCATAGCGcattgctactcgtgtgatattgcgtttatacaacaggtCTGTCTGGTActagaatctgattggctgatagcgatgcgatattctgcaaataacagcaccc
>TCONS_00012392
ACCCGGCGTGCCCCGCGGGAAAGATGGCGCTGAACGGGAGAGGATGGAGATAACTTTTATCTGAAATCTGGAACAGCGGATATCCACACCTGCCATCTGCGGTAACACTTTAACTCCTCGCCCAGAGATAGCGGCGAGAGGACGCGGGATCGGAGATCGCTCCTGACGGCGCGAGCGAGGATATTTTAGCCGCCGTTAGCAAGAGTGTTAGCCTGcgaggaggagaagaagaaggAAAAGCGGGCAAAGTTTATTCAGTTTGAGCAGGAGTCAAGACTGATCGACACCGAACTCTGGATTTAACTGCGGAAAATTACCGGAGACAGGTCATCGATAGCCCTGAGGTGCACATGCGGAGCGGGAGGACGAGGAACGAGACGTGCGCTAGATTGAGTTTCCGGAGGGACCCATTGGGGCGATGAGTCTGGAGAAGACGGCATCACACGCCAGAACGCTGCAGGCCTGAGGACCTGTGAATGAGGACACCGCTGAAAACGGCTCCAGTTTCGGGACTAACGGTGTGTGGAAGCACACTGATCTTCCAGAATGACGAGTGCTGCACCTGCCCGGAAACCTTACCGAAAGGCACCTCCGCAGCACCGCGAGACGCGTCACACTGTGCCAGTATTTCGAGAGGATGTTAGCGGGAGTGCCTTGCCATCCGCCAACCCTGCAACGTCAGCCCAGCCTGACCCCTGCCAGGAGTCCTTATCAGATGCCGACAGGATCAAAATCCTGCAGCAGCAAAATGAAGACCTCCGGCGCCGACTGTCCCAGACCACACATAAGATGGAGGCCATGGAGACGGAGTTCGAAACCAGTCGACATTACATGCAGGCGGAGCTTGGTCGAACTAGAGACGACCTGGAGAAAATGAGAGACAAGTTTAGAAGACTTCAGAACAGCTACACGGCATCTCAGAGAGCTAATCAAGACCTGGAGGAGAAACTTCACGCCCTGCTCCGTAAAGTGGAAAGAGACAAGAAAACTATGGATCAAGAGATAGTGGAGCTCACCAATAAACTTGTGGACGCCAAAAATACCATCGACAAGCTGGAGGAGCTGAACGAACGCTATCGACAGGATTGCAATCTGGCCGTGCAGCTGTTGAAGTGCAATAAATCGCATTTCAGGAACCACAAGTTTGCTGATTTGCCATATGAGCTACAGGACATGGTGAACAAGCATATGAAGAGCAGCTTGCCCAACAAGACTCAGGGAGCTCAAGCCCAGGATCCTGACACTCTAAGCCTGACTCCTGCAGATGTAGTGCCCACTTCGGTCATTGCTCGTGTTCTTGAGAAACCCGAGCCCCTGGTGCTCAACTCGGCTCAGTCTAGCAGCAGTGCAGGTCGGCCTGTGGCTGAGGATGTCTTTGTACACGTGGACATGACGGGACCACAAGATGATGATGGAGGGCGGGAAAATGGTGGTCCTGTTCCTGCTAGGCCTCCTGCGGTAGCTGATACTGACCAGCAGCATGTCAATGGCATGTGTCGAAGCCAGGGCAGCCTTGATGGTCCTACAGGAGATGATGGTGCAGCTCCCTCTTTCGAGAAGCTGAATCCTTACCCTACTCCTTCACCACCAAACCCGCTCTACCCAGGTCGCAAAGTGATTGAGTTTTCTTCTGATGATAAAGTCAAGATCCCCAAGAACAGCCCACTGCCCAATTGCACCTACGCTACTCGTCAGGCTATTTCTTTGAGTCTTGTGCAGAATGAAGAAGAGGCAGCCGAGCGCCAGCGCACAGTGCCTAATAGCCCTGCCATATCTGATGGGGGTTGGCGATCTGGAACCTCCTCATCTTCCGGTGGAGGGATTGCTTCTCACCAGAGGACACCTCCACAGATGGATGCTACAGACACACTCTCCAGTCATTCAAGTCCCTTTAGCAGCCCCCCTCAGCCGCCCAGCGCCTTTGCCAGTTCTGGAAGCTCCGAGGAGGACCTTCTAGCCAGCTGGCAGCGCATGTTTGTTGAAAAAATGGCACCTTCTTCAGATGGCTCCCTTGTCAACCGCACATCCTTCAGCAGTGAGACGGTAAAAGATCTCCAAAGAAGTCATAATGGAAAATCAGGAGTTGGTGCTCTGAGAGGTGCTTACTCTGATGGTGAGGAGGGATCCTCGGCTCAGAGCTGGACAGCAAGTAGAGAGTCAAGTTTGGACACAGACACCAGCAGCATGGCAGACCTTCGGGCAAAGAAGACACAATATGGTGGCGACTTTTCCCATGAAGAAGGTGAACACCTTCTGATGGCTCTGGATCCACTTGATAATGATGGTGCTAGCGGTGACACTATGGTCACCATTGAGAGTAGTCCTGCCTCTGCGAAGCGTCAAGAGTTTGCAGAAGATGTTGGATCGGCGGGAAGTTCAGCAGAAGAGCGAGATGTCCTTCCCCAGGACTTTCCTGTCATTGGCTCAAGGGTTCTTTCTTCCCTTGAGGATTATGCAGATAAGCCCCCTCGGACTGGCTCCTCGCGACCTCTGAAGAGTCCCAAGAGGATGGGGGTTCATCACTTGCACCGCAAAGACAGCCTTACCAGAGCCCAGGAGCATGGCAACTTGCTAGACTGA

Function

symbol description
tjap1 Predicted to be involved in Golgi organization. Predicted to be located in bicellular tight junction. Predicted to be active in trans-Golgi network. Is expressed in several structures, including axis; intestinal bulb; nervous system; notochord; and polster. Orthologous to human TJAP1 (tight junction associated protein 1).

GO:

id name namespace
GO:0007030 Golgi organization biological_process
GO:0005802 trans-Golgi network cellular_component
GO:0005923 bicellular tight junction cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-081107-47 Predicted to be involved in Golgi organization. Predicted to be located in bicellular tight junction. Predicted to be active in trans-Golgi network. Is expressed in several structures, including axis; intestinal bulb; nervous system; notochord; and polster. Orthologous to human TJAP1 (tight junction associated protein 1).

Ensembl:

ensembl_id ENSDARG00000010681

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012391 False 5536 mRNA 0.45 4 3979341 4018888
TCONS_00012392 True 2580 mRNA 0.53 10 3982950 4134141

Neighbor

gene id symbol gene type direction distance location
XLOC_006382 NA coding downstream 18070 3960097 ~ 3961271 (-)
XLOC_006381 ncoa4 coding downstream 42786 3915260 ~ 3936555 (-)
XLOC_006380 si:ch211-128m15.3 coding downstream 100018 3874415 ~ 3879323 (-)
XLOC_006379 prkn coding downstream 462868 3354895 ~ 3516473 (-)
XLOC_006378 si:ch73-193i2.2 coding downstream 627633 3327417 ~ 3351708 (-)
XLOC_006384 dnph1 coding upstream 84188 4218329 ~ 4223955 (-)
XLOC_006385 ppp2r5d coding upstream 98427 4232568 ~ 4303641 (-)
XLOC_006386 znf318 coding upstream 173442 4307583 ~ 4333181 (-)
XLOC_006387 si:dkeyp-121d4.3 coding upstream 204741 4338882 ~ 4396657 (-)
XLOC_006388 NA coding upstream 271151 4405292 ~ 4407072 (-)
XLOC_006338 rn7sk misc downstream 3153116 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 6130600 10264741 ~ 10264905 (-)
XLOC_006376 AL935294.1 non-coding downstream 736083 3198438 ~ 3243258 (-)
XLOC_006374 LO018354.1 non-coding downstream 924404 3054823 ~ 3054937 (-)
XLOC_006372 NA non-coding downstream 1055217 2919298 ~ 2924124 (-)
XLOC_006371 NA non-coding downstream 1071186 2899327 ~ 2908155 (-)
XLOC_006389 NA non-coding upstream 273716 4407857 ~ 4408486 (-)
XLOC_006390 CR854838.1 non-coding upstream 311412 4445553 ~ 4447653 (-)
XLOC_006393 CU856520.1 non-coding upstream 578280 4712421 ~ 4714106 (-)
XLOC_006394 NA non-coding upstream 583649 4717790 ~ 4719393 (-)

Expression


Co-expression Network