XLOC_006549 (BX908770.1)


Basic Information

Item Value
gene id XLOC_006549
gene name BX908770.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 18521493 ~ 18548729 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012679
ttaatactattaatttttaaatcaagCCTCTTAGTGATGGTGAGAGCTGGGAGGCTGACGGCCTGTCTCCCTCTGCTCATCAATaaacaatttgcatgttctcaccgtgttcgtacatgcgctacaggtgaattggtttttgcagttgtgcTCTTCAATacgcaatataaatacaatatctcaaaaaaaaaaatggttttccctgttggtattaatatggaccttttagtttcctccagatgctacGTTTTCActctcaagtccaaagacatgtggtacagTATTTTAAACATCCTAAATCTGATATTAATAGGTAGGCctactTCGCACTGTTGTCCCGTATCCCCAAACTCCAATGCCAGGGTAAAGAGGCTGTTGTGCATAAACGAGTATTCGGATTCAGAGCAGTACAAACTCCAAGACTTGTCATTCCTTCCGAAGCTGCCAGCATCAACAATGTGTTTATATAAAATGAGAATCTCACTATTTCTGAACTCTATAAAAGACATTTCCCTGTTAGTAACAGAGCCGAATAACATATCTGTGATAGAGTGGTGGCACACCCTAATGCTAGATGAGACATTCAGGAGATGGGAAAGGAGTCCAGTTCGACCGGCGCTGTCACATTGTCGCCCACACTGTGTCAAATGTGTGtactttAGAGAACTACATACAAACACTGGTTTTTGCTCAGTACCTGTAAGAAATGAATCACACTCTGTGATGAATGCTATCATagtggaaaaactaattctcattagatataagattgaggttagggttagggttaatgtaagcaACAGATTAGCATATATTTGCAATATTAATttcagtaatttactTTGCATTGAGCATGAGTGGTTGTCTACTGAGCATCTCAGCAGTTGCCCTGTCGCCGCCACCAgtttaataatcactaatagtcattataaaagtataatgtttatacaatatagAAGATTACAGGAACTTTTTAAACTTGATAATGTGCACCTTTTAGTtacattttgtaataattttgttcttttaAACACATGCAGTGTTTCTGCTCCAGCACCAGTGAAAATCGGCGGAGAGGAGGATACACTGCCAGCTGAAGAGGCCGAAGAATCGCTAGGGCACATTCTGCAAGATTGGGAATTCTGCTCTTTGAATCTTCCGCACTGTCCAGatgttttgtttttgaataatCCACAAAATAAAAACATCAAGTTTTGTCCTGAAAATTTTTCCAAGCTTGGAATGTGTGAAATAAATGAATTCAAGCATTCAGGGTTTCCAatttactttaacctgtttttcattgcagacaatatgaacacaaaatacttAATTCTGGACCATAAGAGAGTGGAAACAAGTACTGTGACAATGCAagaccacattctgcacacattgcaaagtcctggctgtgaaggaagaggaaacaggattacttattatttatttaacATGACATCTCTCGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112942

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012679 True 1467 mRNA 0.38 52 18521493 18548729

Neighbor

gene id symbol gene type direction distance location
XLOC_006548 si:dkey-228d14.5 coding downstream 175639 18332685 ~ 18345854 (-)
XLOC_006547 slc25a16 coding downstream 325551 18179096 ~ 18195942 (-)
XLOC_006546 alox5a coding downstream 346629 18128275 ~ 18174864 (-)
XLOC_006545 washc2c coding downstream 399160 18073211 ~ 18122333 (-)
XLOC_006544 zfand4 coding downstream 452072 18019709 ~ 18069421 (-)
XLOC_006550 mat1a coding upstream 80191 18628920 ~ 18637244 (-)
XLOC_006551 CR932438.1 coding upstream 96161 18644890 ~ 18645005 (-)
XLOC_006552 CR932438.2 coding upstream 100763 18649492 ~ 18649682 (-)
XLOC_006553 sfxn3 coding upstream 128699 18677428 ~ 18695289 (-)
XLOC_006554 CR932361.2 coding upstream 166581 18715310 ~ 18715426 (-)
XLOC_006471 BX537274.2 misc downstream 8256588 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 17695268 825904 ~ 826225 (-)
XLOC_006541 NA non-coding downstream 827674 17686484 ~ 17693819 (-)
XLOC_006540 NA non-coding downstream 990957 17494297 ~ 17530536 (-)
XLOC_006538 NA non-coding downstream 1642423 16868380 ~ 16879070 (-)
XLOC_006537 BX323467.1 non-coding downstream 2213610 16307767 ~ 16307883 (-)
XLOC_006536 NA non-coding downstream 2259920 16260651 ~ 16261573 (-)
XLOC_006556 NA non-coding upstream 461443 19010172 ~ 19016833 (-)
XLOC_006557 NA non-coding upstream 727444 19276173 ~ 19277332 (-)

Expression


Co-expression Network