CI01000000_05008086_05008382


Basic Information

Item Value
gene id CI01000000_05008086_05008382
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 5008003 ~ 5008641 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_05008086_05008382.mRNA
CTTTAAATGCCCCGCTTGACTTAACCTACACGGTTCGTTGTTTATTTGTGTATTCATGTCTTTTATTTTATTACAGGAGGGTAATGAGAGGCTCCAGAAGATGGTGGGCAGCTGTCCTGCTCTGGGGGGCAGCGCTGATCGCAGAGGCACGTCCAGGCAAAGAAGGATTTAGCCCGCTGGGATATCGACCTCTCGTCAGATTCCGTCACAAGGTATCGATTTTTCCTATTTCATTAGCCATCCCTTTACAAGAGGAGACTTCTGTGTGGCCAGTTACAATGCTAATTGCTATGGAAATCCGCATGGCATCGAGCGCTTCTGGTTTGATTATTGTCATGAACCGAATATCAGATATGCATAACAGTATTTCTTTAGACTAAAACGTATTGGATCTTTCGGTCTGGACATTTCAAACTCCAGGCGAAAACTCCTGCTGCGCTGACATCATGATGAAAGAGCGCAGCGTGATTGTGTAATTGAATGTTTATTGACTGGCCATTGCAGCGAGCTTTGTGGACACACACAGTCAGATACCAGCAATTGAGGCGTAATGCAGCTCTAACAAGCTCCACTGGTTCCCTCTTCTCTTTTTCCTTCATCATCTCCATGAGCGAACGTTCATATTATGTAACGGATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_05008086_05008382.mRNA True 639 mRNA 0.45 1 5008003 5008641

Neighbor

gene id symbol gene type direction distance location
CI01000000_04698746_04717749 RAPGEF2 coding upstream 289095 4698041 ~ 4718908 (+)
CI01000000_04661351_04667059 NA coding upstream 340916 4661351 ~ 4667087 (+)
CI01000000_04576065_04586515 ETFDH coding upstream 421122 4576065 ~ 4586881 (+)
CI01000000_04547587_04562715 RXFP1 coding upstream 445166 4547587 ~ 4562837 (+)
CI01000000_04462428_04462831 NA coding upstream 544891 4462428 ~ 4463112 (+)
CI01000000_05030001_05137032 FSTL5 coding downstream 21360 5030001 ~ 5137032 (+)
CI01000000_05173896_05177992 QDPRA coding downstream 165255 5173896 ~ 5178085 (+)
CI01000000_05204803_05264985 LDB2, LDB2A coding downstream 196162 5204803 ~ 5264985 (+)
CI01000000_05267332_05282842 TAPT1 coding downstream 258691 5267332 ~ 5283179 (+)
CI01000000_05321817_05358603 PROM1A coding downstream 312829 5321470 ~ 5358764 (+)
G3135 NA non-coding upstream 27877 4979916 ~ 4980126 (+)
G3130 NA non-coding upstream 34296 4973335 ~ 4973707 (+)
G3125 NA non-coding upstream 40162 4967562 ~ 4967841 (+)
G3124 NA non-coding upstream 40733 4966988 ~ 4967270 (+)
G3115 NA non-coding upstream 46330 4961442 ~ 4961673 (+)
G3205 NA non-coding downstream 82622 5091263 ~ 5109602 (+)
G3214 NA non-coding downstream 138103 5146744 ~ 5147234 (+)
G3218 NA non-coding downstream 144095 5152736 ~ 5153054 (+)
G3225 NA non-coding downstream 189327 5197968 ~ 5198171 (+)
G3259 NA non-coding downstream 420739 5429380 ~ 5429687 (+)
G2850 NA other upstream 281521 4725986 ~ 4726482 (+)
G2774 NA other upstream 553771 4453778 ~ 4454232 (+)
G579 NA other upstream 3099195 1767917 ~ 1908808 (+)
G435 NA other upstream 3575149 1425121 ~ 1432854 (+)
G350 NA other upstream 4331066 671842 ~ 676937 (+)
G6811 NA other downstream 5196190 10204831 ~ 10321679 (+)
G6820 NA other downstream 5418582 10427223 ~ 10433018 (+)
G7018 NA other downstream 5969848 10978489 ~ 10980872 (+)
G7153 NA other downstream 6235816 11244457 ~ 11245633 (+)
G7514 NA other downstream 7127881 12136522 ~ 12137008 (+)

Expression


Co-expression Network